RNA–Protein interactions for RNA: ENST00000550018.5

PPFIA2-218, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-218ENST00000550018 C10orf71Q711Q0 1435 aa13.67□□□□□ -0.22
PPFIA2-218ENST00000550018 HSPA6P17066 643 aa13.67□□□□□ -0.22
PPFIA2-218ENST00000550018 RAPGEF4Q8WZA2 1011 aa13.67□□□□□ -0.22
PPFIA2-218ENST00000550018 ASAP1Q9ULH1 1129 aa13.67□□□□□ -0.22
PPFIA2-218ENST00000550018 VIRMAQ69YN4 1812 aaKnown RBP13.67□□□□□ -0.22
PPFIA2-218ENST00000550018 AK7Q96M32 723 aa13.66□□□□□ -0.22
PPFIA2-218ENST00000550018 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
PPFIA2-218ENST00000550018 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
PPFIA2-218ENST00000550018 HTRA3P83110 453 aa13.65□□□□□ -0.22
PPFIA2-218ENST00000550018 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
PPFIA2-218ENST00000550018 SBF1O95248 1867 aa13.64□□□□□ -0.23
PPFIA2-218ENST00000550018 CGNL1Q0VF96 1302 aa13.64□□□□□ -0.23
PPFIA2-218ENST00000550018 LOC102724428A0A0B4J2F2 783 aa13.63□□□□□ -0.23
PPFIA2-218ENST00000550018 GNPATO15228 680 aa13.63□□□□□ -0.23
PPFIA2-218ENST00000550018 SIK1P57059 783 aa13.63□□□□□ -0.23
PPFIA2-218ENST00000550018 MMP10P09238 476 aa13.62□□□□□ -0.23
PPFIA2-218ENST00000550018 EYA1Q99502 592 aa13.62□□□□□ -0.23
PPFIA2-218ENST00000550018 NMRK2Q9NPI5 230 aa13.62□□□□□ -0.23
PPFIA2-218ENST00000550018 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
PPFIA2-218ENST00000550018 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
PPFIA2-218ENST00000550018 NKX1-1Q15270 411 aaPredicted RBP13.61□□□□□ -0.23
PPFIA2-218ENST00000550018 ATG3Q9NT62 314 aa13.61□□□□□ -0.23
PPFIA2-218ENST00000550018 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
PPFIA2-218ENST00000550018 A0A0G2JLW4 131 aa13.6□□□□□ -0.23
PPFIA2-218ENST00000550018 PPM1GO15355 546 aaPredicted RBP13.6□□□□□ -0.23
PPFIA2-218ENST00000550018 PHKG2P15735 406 aa13.6□□□□□ -0.23
PPFIA2-218ENST00000550018 SSFA2P28290 1259 aa13.6□□□□□ -0.23
PPFIA2-218ENST00000550018 TIAM2Q8IVF5 1701 aa13.6□□□□□ -0.23
PPFIA2-218ENST00000550018 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
PPFIA2-218ENST00000550018 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.23
PPFIA2-218ENST00000550018 DLEC1Q9Y238 1755 aa13.58□□□□□ -0.23
PPFIA2-218ENST00000550018 DPEP1P16444 411 aa13.58□□□□□ -0.24
PPFIA2-218ENST00000550018 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
PPFIA2-218ENST00000550018 DNAJC5GQ8N7S2 189 aa13.58□□□□□ -0.24
PPFIA2-218ENST00000550018 FLAD1Q8NFF5 587 aa13.58□□□□□ -0.24
PPFIA2-218ENST00000550018 CCDC88AQ3V6T2 1871 aa13.58□□□□□ -0.24
PPFIA2-218ENST00000550018 TNRC6CQ9HCJ0 1690 aaKnown RBP13.57□□□□□ -0.24
PPFIA2-218ENST00000550018 EIF4A2Q14240 407 aaKnown RBP13.57□□□□□ -0.24
PPFIA2-218ENST00000550018 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
PPFIA2-218ENST00000550018 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
PPFIA2-218ENST00000550018 SRP68Q9UHB9 627 aaKnown RBP13.57□□□□□ -0.24
PPFIA2-218ENST00000550018 BCS1LQ9Y276 419 aa13.57□□□□□ -0.24
PPFIA2-218ENST00000550018 COL11A2P13942 1736 aaPredicted RBP13.56□□□□□ -0.24
PPFIA2-218ENST00000550018 KCNA3P22001 575 aa13.56□□□□□ -0.24
PPFIA2-218ENST00000550018 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
PPFIA2-218ENST00000550018 GYS1P13807 737 aa13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 TNNT2P45379 298 aaPredicted RBP13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 TMF1P82094 1093 aa13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 DDR1Q08345 913 aa13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 AEBP1Q8IUX7 1158 aa13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 NRXN2Q9P2S2 1712 aa13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 PCNTO95613 3336 aa13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 ANKRD31Q8N7Z5 1873 aa13.55□□□□□ -0.24
PPFIA2-218ENST00000550018 PRELPP51888 382 aa13.54□□□□□ -0.24
PPFIA2-218ENST00000550018 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
PPFIA2-218ENST00000550018 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
PPFIA2-218ENST00000550018 CHRNA5P30532 468 aa13.52□□□□□ -0.25
PPFIA2-218ENST00000550018 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
PPFIA2-218ENST00000550018 SPG7Q9UQ90 795 aa13.52□□□□□ -0.25
PPFIA2-218ENST00000550018 UBR2Q8IWV8 1755 aa13.51□□□□□ -0.25
PPFIA2-218ENST00000550018 CARMIL3Q8ND23 1372 aa13.51□□□□□ -0.25
PPFIA2-218ENST00000550018 CNTNAP4Q9C0A0 1308 aa13.51□□□□□ -0.25
PPFIA2-218ENST00000550018 RASSF7Q02833 373 aa13.51□□□□□ -0.25
PPFIA2-218ENST00000550018 FKBP8Q14318 412 aa13.51□□□□□ -0.25
PPFIA2-218ENST00000550018 COL13A1Q5TAT6 717 aaPredicted RBP13.51□□□□□ -0.25
PPFIA2-218ENST00000550018 C9orf131Q5VYM1 1079 aa13.51□□□□□ -0.25
PPFIA2-218ENST00000550018 ARHGAP27Q6ZUM4 889 aa13.51□□□□□ -0.25
PPFIA2-218ENST00000550018 FCHSD2O94868 740 aa13.5□□□□□ -0.25
PPFIA2-218ENST00000550018 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
PPFIA2-218ENST00000550018 APLP1P51693 650 aa13.49□□□□□ -0.25
PPFIA2-218ENST00000550018 RTCBQ9Y3I0 505 aaKnown RBP13.49□□□□□ -0.25
PPFIA2-218ENST00000550018 SCN7AQ01118 1682 aa13.48□□□□□ -0.25
PPFIA2-218ENST00000550018 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
PPFIA2-218ENST00000550018 TOMM70O94826 608 aa13.48□□□□□ -0.25
PPFIA2-218ENST00000550018 CRKLP46109 303 aaKnown RBP13.48□□□□□ -0.25
PPFIA2-218ENST00000550018 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
PPFIA2-218ENST00000550018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.25
PPFIA2-218ENST00000550018 MRC1P22897 1456 aa13.48□□□□□ -0.25
PPFIA2-218ENST00000550018 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
PPFIA2-218ENST00000550018 RPS6KA4O75676 772 aa13.47□□□□□ -0.25
PPFIA2-218ENST00000550018 CAPN15O75808 1086 aa13.47□□□□□ -0.25
PPFIA2-218ENST00000550018 TGFB2P61812 414 aa13.47□□□□□ -0.25
PPFIA2-218ENST00000550018 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
PPFIA2-218ENST00000550018 DCAF5Q96JK2 942 aa13.47□□□□□ -0.25
PPFIA2-218ENST00000550018 POLR3GLQ9BT43 218 aa13.46□□□□□ -0.25
PPFIA2-218ENST00000550018 SIPA1L3O60292 1781 aaPredicted RBP13.45□□□□□ -0.26
PPFIA2-218ENST00000550018 POLRMTO00411 1230 aaKnown RBP13.45□□□□□ -0.26
PPFIA2-218ENST00000550018 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
PPFIA2-218ENST00000550018 INTS5Q6P9B9 1019 aaKnown RBP13.45□□□□□ -0.26
PPFIA2-218ENST00000550018 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
PPFIA2-218ENST00000550018 RNF181Q9P0P0 153 aa13.45□□□□□ -0.26
PPFIA2-218ENST00000550018 FER1L6Q2WGJ9 1857 aa13.44□□□□□ -0.26
PPFIA2-218ENST00000550018 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
PPFIA2-218ENST00000550018 NLGN1Q8N2Q7 840 aa13.44□□□□□ -0.26
PPFIA2-218ENST00000550018 KLRG1Q96E93 195 aa13.44□□□□□ -0.26
PPFIA2-218ENST00000550018 RRAGCQ9HB90 399 aa13.44□□□□□ -0.26
PPFIA2-218ENST00000550018 DICER1Q9UPY3 1922 aaKnown RBP13.44□□□□□ -0.26
PPFIA2-218ENST00000550018 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
PPFIA2-218ENST00000550018 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms