RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 MTHFSP49914 203 aa18.3■□□□□ 0.52
GCN1-206ENST00000549815 MSL1Q68DK7 614 aa18.3■□□□□ 0.52
GCN1-206ENST00000549815 ZNF530Q6P9A1 599 aaPredicted RBP18.3■□□□□ 0.52
GCN1-206ENST00000549815 AK7Q96M32 723 aa18.3■□□□□ 0.52
GCN1-206ENST00000549815 ATP6V1AP38606 617 aa18.29■□□□□ 0.52
GCN1-206ENST00000549815 SMIM5Q71RC9 77 aa18.29■□□□□ 0.52
GCN1-206ENST00000549815 NLGN2Q8NFZ4 835 aa18.29■□□□□ 0.52
GCN1-206ENST00000549815 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
GCN1-206ENST00000549815 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
GCN1-206ENST00000549815 CHD4Q14839 1912 aa18.28■□□□□ 0.52
GCN1-206ENST00000549815 KLHL34Q8N239 644 aa18.28■□□□□ 0.52
GCN1-206ENST00000549815 COL5A3P25940 1745 aaPredicted RBP18.28■□□□□ 0.52
GCN1-206ENST00000549815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.27■□□□□ 0.52
GCN1-206ENST00000549815 SSFA2P28290 1259 aa18.27■□□□□ 0.52
GCN1-206ENST00000549815 CC2D1BQ5T0F9 858 aaKnown RBP18.27■□□□□ 0.52
GCN1-206ENST00000549815 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.51
GCN1-206ENST00000549815 PHF14O94880 888 aa18.26■□□□□ 0.51
GCN1-206ENST00000549815 COL3A1P02461 1466 aaPredicted RBP18.25■□□□□ 0.51
GCN1-206ENST00000549815 CABP4P57796 275 aa18.24■□□□□ 0.51
GCN1-206ENST00000549815 C1orf141Q5JVX7 400 aa18.24■□□□□ 0.51
GCN1-206ENST00000549815 GNPATO15228 680 aa18.23■□□□□ 0.51
GCN1-206ENST00000549815 GPR162Q16538 588 aa18.23■□□□□ 0.51
GCN1-206ENST00000549815 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
GCN1-206ENST00000549815 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
GCN1-206ENST00000549815 VIRMAQ69YN4 1812 aaKnown RBP18.22■□□□□ 0.51
GCN1-206ENST00000549815 AKAP4Q5JQC9 854 aa18.22■□□□□ 0.51
GCN1-206ENST00000549815 NFATC2IPQ8NCF5 419 aa18.22■□□□□ 0.51
GCN1-206ENST00000549815 RBM42Q9BTD8 480 aaKnown RBP18.22■□□□□ 0.51
GCN1-206ENST00000549815 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
GCN1-206ENST00000549815 MYH14Q7Z406 1995 aaKnown RBP18.22■□□□□ 0.51
GCN1-206ENST00000549815 DIAPH1O60610 1272 aaKnown RBP18.21■□□□□ 0.51
GCN1-206ENST00000549815 HMOX1P09601 288 aa18.21■□□□□ 0.51
GCN1-206ENST00000549815 RC3H1Q5TC82 1133 aaKnown RBP18.21■□□□□ 0.51
GCN1-206ENST00000549815 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
GCN1-206ENST00000549815 TJP1Q07157 1748 aa18.2■□□□□ 0.5
GCN1-206ENST00000549815 MRC1P22897 1456 aa18.2■□□□□ 0.5
GCN1-206ENST00000549815 YBX3P16989 372 aaKnown RBP eCLIP18.19■□□□□ 0.5
GCN1-206ENST00000549815 ZNF784Q8NCA9 323 aaPredicted RBP18.19■□□□□ 0.5
GCN1-206ENST00000549815 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
GCN1-206ENST00000549815 MTHFSDQ2M296 383 aaKnown RBP18.18■□□□□ 0.5
GCN1-206ENST00000549815 SLC52A2Q9HAB3 445 aa18.18■□□□□ 0.5
GCN1-206ENST00000549815 RTCBQ9Y3I0 505 aaKnown RBP18.18■□□□□ 0.5
GCN1-206ENST00000549815 RNMTO43148 476 aaKnown RBP18.17■□□□□ 0.5
GCN1-206ENST00000549815 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
GCN1-206ENST00000549815 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
GCN1-206ENST00000549815 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
GCN1-206ENST00000549815 C4AP0C0L4 1744 aa18.17■□□□□ 0.5
GCN1-206ENST00000549815 PTCD1O75127 700 aaKnown RBP18.16■□□□□ 0.5
GCN1-206ENST00000549815 ADRA2BP18089 450 aa18.16■□□□□ 0.5
GCN1-206ENST00000549815 ARHGEF1Q92888 912 aaKnown RBP18.16■□□□□ 0.5
GCN1-206ENST00000549815 KIF13BQ9NQT8 1826 aa18.15■□□□□ 0.5
GCN1-206ENST00000549815 CNGB1Q14028 1251 aaPredicted RBP18.15■□□□□ 0.5
GCN1-206ENST00000549815 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.49
GCN1-206ENST00000549815 KIAA1551Q9HCM1 1747 aa18.14■□□□□ 0.49
GCN1-206ENST00000549815 GRIN3BO60391 1043 aa18.13■□□□□ 0.49
GCN1-206ENST00000549815 MMP10P09238 476 aa18.13■□□□□ 0.49
GCN1-206ENST00000549815 GYS1P13807 737 aa18.13■□□□□ 0.49
GCN1-206ENST00000549815 CRKLP46109 303 aaKnown RBP18.13■□□□□ 0.49
GCN1-206ENST00000549815 NLGN1Q8N2Q7 840 aa18.12■□□□□ 0.49
GCN1-206ENST00000549815 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
GCN1-206ENST00000549815 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
GCN1-206ENST00000549815 INTS5Q6P9B9 1019 aaKnown RBP18.11■□□□□ 0.49
GCN1-206ENST00000549815 U2SURPO15042 1029 aaKnown RBP18.1■□□□□ 0.49
GCN1-206ENST00000549815 RFC4P35249 363 aa18.1■□□□□ 0.49
GCN1-206ENST00000549815 DNAJC10Q8IXB1 793 aa18.1■□□□□ 0.49
GCN1-206ENST00000549815 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
GCN1-206ENST00000549815 C10orf71Q711Q0 1435 aa18.09■□□□□ 0.49
GCN1-206ENST00000549815 PXDNLA1KZ92 1463 aa18.08■□□□□ 0.49
GCN1-206ENST00000549815 USP42Q9H9J4 1324 aaKnown RBP18.08■□□□□ 0.49
GCN1-206ENST00000549815 CYP19A1P11511 503 aaPredicted RBP18.08■□□□□ 0.48
GCN1-206ENST00000549815 PPP2R1AP30153 589 aa18.08■□□□□ 0.48
GCN1-206ENST00000549815 IL17REQ8NFR9 667 aa18.07■□□□□ 0.48
GCN1-206ENST00000549815 GAS2L2Q8NHY3 880 aa18.07■□□□□ 0.48
GCN1-206ENST00000549815 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
GCN1-206ENST00000549815 SRP68Q9UHB9 627 aaKnown RBP18.07■□□□□ 0.48
GCN1-206ENST00000549815 N4BP2Q86UW6 1770 aaPredicted RBP18.07■□□□□ 0.48
GCN1-206ENST00000549815 SOS1Q07889 1333 aaPredicted RBP18.06■□□□□ 0.48
GCN1-206ENST00000549815 GNAT3A8MTJ3 354 aa18.06■□□□□ 0.48
GCN1-206ENST00000549815 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
GCN1-206ENST00000549815 PHACTR3Q96KR7 559 aa18.06■□□□□ 0.48
GCN1-206ENST00000549815 CCDC87Q9NVE4 849 aa18.06■□□□□ 0.48
GCN1-206ENST00000549815 TGFB2P61812 414 aa18.05■□□□□ 0.48
GCN1-206ENST00000549815 FKBP8Q14318 412 aa18.05■□□□□ 0.48
GCN1-206ENST00000549815 CFAP53Q96M91 514 aa18.05■□□□□ 0.48
GCN1-206ENST00000549815 WWC3Q9ULE0 1092 aa18.05■□□□□ 0.48
GCN1-206ENST00000549815 CEMIPQ8WUJ3 1361 aa18.04■□□□□ 0.48
GCN1-206ENST00000549815 BRCA1P38398 1863 aaKnown RBP18.04■□□□□ 0.48
GCN1-206ENST00000549815 PRKAR2BP31323 418 aa18.04■□□□□ 0.48
GCN1-206ENST00000549815 ADCY9O60503 1353 aa18.04■□□□□ 0.48
GCN1-206ENST00000549815 DDR1Q08345 913 aa18.03■□□□□ 0.48
GCN1-206ENST00000549815 ZBTB1Q9Y2K1 713 aa18.03■□□□□ 0.48
GCN1-206ENST00000549815 PARP3Q9Y6F1 533 aa18.03■□□□□ 0.48
GCN1-206ENST00000549815 TM4SF1P30408 202 aa18.02■□□□□ 0.48
GCN1-206ENST00000549815 NUDCQ9Y266 331 aa18.02■□□□□ 0.48
GCN1-206ENST00000549815 A0A0G2JLW4 131 aa18.01■□□□□ 0.47
GCN1-206ENST00000549815 USPL1Q5W0Q7 1092 aa18.01■□□□□ 0.47
GCN1-206ENST00000549815 ZNF790Q6PG37 636 aa18.01■□□□□ 0.47
GCN1-206ENST00000549815 COL15A1P39059 1388 aa18.01■□□□□ 0.47
GCN1-206ENST00000549815 ATP10DQ9P241 1426 aa18■□□□□ 0.47
GCN1-206ENST00000549815 KCNA3P22001 575 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms