RNA–Protein interactions for RNA: ENST00000549672.5

ERBB3-212, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-212ENST00000549672 ITPK1Q13572 414 aa11.88□□□□□ -0.51
ERBB3-212ENST00000549672 RAPGEF4Q8WZA2 1011 aa11.88□□□□□ -0.51
ERBB3-212ENST00000549672 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
ERBB3-212ENST00000549672 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
ERBB3-212ENST00000549672 GNPATO15228 680 aa11.87□□□□□ -0.51
ERBB3-212ENST00000549672 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
ERBB3-212ENST00000549672 C9orf131Q5VYM1 1079 aa11.87□□□□□ -0.51
ERBB3-212ENST00000549672 PIGBQ92521 554 aa11.87□□□□□ -0.51
ERBB3-212ENST00000549672 COG3Q96JB2 828 aa11.87□□□□□ -0.51
ERBB3-212ENST00000549672 TERF2IPQ9NYB0 399 aa11.87□□□□□ -0.51
ERBB3-212ENST00000549672 PLEKHG2Q9H7P9 1386 aa11.87□□□□□ -0.51
ERBB3-212ENST00000549672 SMG6Q86US8 1419 aaKnown RBP11.86□□□□□ -0.51
ERBB3-212ENST00000549672 LOC102724428A0A0B4J2F2 783 aa11.86□□□□□ -0.51
ERBB3-212ENST00000549672 FCHSD2O94868 740 aa11.86□□□□□ -0.51
ERBB3-212ENST00000549672 DPEP1P16444 411 aa11.86□□□□□ -0.51
ERBB3-212ENST00000549672 SIK1P57059 783 aa11.86□□□□□ -0.51
ERBB3-212ENST00000549672 FSTL1Q12841 308 aa11.86□□□□□ -0.51
ERBB3-212ENST00000549672 C16orf71Q8IYS4 520 aaPredicted RBP11.86□□□□□ -0.51
ERBB3-212ENST00000549672 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
ERBB3-212ENST00000549672 SIN3AQ96ST3 1273 aa11.86□□□□□ -0.51
ERBB3-212ENST00000549672 CACNA1SQ13698 1873 aa11.85□□□□□ -0.51
ERBB3-212ENST00000549672 ADAMTS7Q9UKP4 1686 aa11.85□□□□□ -0.51
ERBB3-212ENST00000549672 HSPA1AP0DMV8 641 aaKnown RBP11.85□□□□□ -0.51
ERBB3-212ENST00000549672 HSPA1BP0DMV9 641 aaKnown RBP11.85□□□□□ -0.51
ERBB3-212ENST00000549672 TGFB2P61812 414 aa11.85□□□□□ -0.51
ERBB3-212ENST00000549672 TJP1Q07157 1748 aa11.84□□□□□ -0.51
ERBB3-212ENST00000549672 KCNA3P22001 575 aa11.84□□□□□ -0.51
ERBB3-212ENST00000549672 RRAGCQ9HB90 399 aa11.84□□□□□ -0.51
ERBB3-212ENST00000549672 ASAP1Q9ULH1 1129 aa11.84□□□□□ -0.51
ERBB3-212ENST00000549672 NCAPD2Q15021 1401 aa11.84□□□□□ -0.51
ERBB3-212ENST00000549672 INSRP06213 1382 aa11.83□□□□□ -0.52
ERBB3-212ENST00000549672 KDRP35968 1356 aa11.83□□□□□ -0.52
ERBB3-212ENST00000549672 HSP90AB2PQ58FF8 381 aa11.83□□□□□ -0.52
ERBB3-212ENST00000549672 HMGB2P26583 209 aaKnown RBP11.82□□□□□ -0.52
ERBB3-212ENST00000549672 RNF181Q9P0P0 153 aa11.82□□□□□ -0.52
ERBB3-212ENST00000549672 KDM2BQ8NHM5 1336 aa11.82□□□□□ -0.52
ERBB3-212ENST00000549672 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
ERBB3-212ENST00000549672 DCAF5Q96JK2 942 aa11.81□□□□□ -0.52
ERBB3-212ENST00000549672 CARD11Q9BXL7 1154 aa11.81□□□□□ -0.52
ERBB3-212ENST00000549672 GGNBP2Q9H3C7 697 aa11.81□□□□□ -0.52
ERBB3-212ENST00000549672 FLT4P35916 1363 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 NRXN2Q9P2S2 1712 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 SLC34A2O95436 690 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 GYS1P13807 737 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 TMF1P82094 1093 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 NKX1-1Q15270 411 aaPredicted RBP11.8□□□□□ -0.52
ERBB3-212ENST00000549672 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 CCDC87Q9NVE4 849 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 FER1L6Q2WGJ9 1857 aa11.8□□□□□ -0.52
ERBB3-212ENST00000549672 ANKRD31Q8N7Z5 1873 aa11.79□□□□□ -0.52
ERBB3-212ENST00000549672 FYB1O15117 783 aa11.79□□□□□ -0.52
ERBB3-212ENST00000549672 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
ERBB3-212ENST00000549672 TMOD3Q9NYL9 352 aa11.79□□□□□ -0.52
ERBB3-212ENST00000549672 KDM6AO15550 1401 aaPredicted RBP11.78□□□□□ -0.52
ERBB3-212ENST00000549672 RASSF7Q02833 373 aa11.78□□□□□ -0.52
ERBB3-212ENST00000549672 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
ERBB3-212ENST00000549672 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
ERBB3-212ENST00000549672 RTCBQ9Y3I0 505 aaKnown RBP11.78□□□□□ -0.52
ERBB3-212ENST00000549672 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.52
ERBB3-212ENST00000549672 CHRNA5P30532 468 aa11.77□□□□□ -0.53
ERBB3-212ENST00000549672 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
ERBB3-212ENST00000549672 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.53
ERBB3-212ENST00000549672 TESK2Q96S53 571 aa11.77□□□□□ -0.53
ERBB3-212ENST00000549672 PIM2Q9P1W9 311 aa11.77□□□□□ -0.53
ERBB3-212ENST00000549672 PARP3Q9Y6F1 533 aa11.77□□□□□ -0.53
ERBB3-212ENST00000549672 COL11A2P13942 1736 aaPredicted RBP11.77□□□□□ -0.53
ERBB3-212ENST00000549672 DDR1Q08345 913 aa11.76□□□□□ -0.53
ERBB3-212ENST00000549672 DALRD3Q5D0E6 543 aaKnown RBP11.76□□□□□ -0.53
ERBB3-212ENST00000549672 EMILIN1Q9Y6C2 1016 aa11.76□□□□□ -0.53
ERBB3-212ENST00000549672 SRP68Q9UHB9 627 aaKnown RBP11.75□□□□□ -0.53
ERBB3-212ENST00000549672 CNTNAP4Q9C0A0 1308 aa11.75□□□□□ -0.53
ERBB3-212ENST00000549672 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
ERBB3-212ENST00000549672 PHKG2P15735 406 aa11.74□□□□□ -0.53
ERBB3-212ENST00000549672 RFC4P35249 363 aa11.74□□□□□ -0.53
ERBB3-212ENST00000549672 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
ERBB3-212ENST00000549672 SPG7Q9UQ90 795 aa11.74□□□□□ -0.53
ERBB3-212ENST00000549672 TONSLQ96HA7 1378 aa11.74□□□□□ -0.53
ERBB3-212ENST00000549672 RPS6KA4O75676 772 aa11.73□□□□□ -0.53
ERBB3-212ENST00000549672 ADRA2BP18089 450 aa11.73□□□□□ -0.53
ERBB3-212ENST00000549672 FKBP8Q14318 412 aa11.73□□□□□ -0.53
ERBB3-212ENST00000549672 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
ERBB3-212ENST00000549672 ST20-MTHFSA0A0A6YYL1 179 aa11.72□□□□□ -0.53
ERBB3-212ENST00000549672 FOXN1O15353 648 aa11.72□□□□□ -0.53
ERBB3-212ENST00000549672 VEGFAP15692 232 aaPredicted RBP11.72□□□□□ -0.53
ERBB3-212ENST00000549672 RC3H1Q5TC82 1133 aaKnown RBP11.72□□□□□ -0.53
ERBB3-212ENST00000549672 EYA1Q99502 592 aa11.72□□□□□ -0.53
ERBB3-212ENST00000549672 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.53
ERBB3-212ENST00000549672 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.53
ERBB3-212ENST00000549672 GLTPD2A6NH11 291 aa11.71□□□□□ -0.53
ERBB3-212ENST00000549672 POTECB2RU33 542 aa11.71□□□□□ -0.53
ERBB3-212ENST00000549672 IFNL2Q8IZJ0 200 aa11.71□□□□□ -0.53
ERBB3-212ENST00000549672 MKRN1Q9UHC7 482 aaKnown RBP11.71□□□□□ -0.53
ERBB3-212ENST00000549672 SCN4AP35499 1836 aa11.71□□□□□ -0.54
ERBB3-212ENST00000549672 SLX4Q8IY92 1834 aa11.7□□□□□ -0.54
ERBB3-212ENST00000549672 POLRMTO00411 1230 aaKnown RBP11.7□□□□□ -0.54
ERBB3-212ENST00000549672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.7□□□□□ -0.54
ERBB3-212ENST00000549672 TNRC18O15417 2968 aaPredicted RBP11.69□□□□□ -0.54
ERBB3-212ENST00000549672 PPM1GO15355 546 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms