RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 IPO9Q96P70 1041 aaKnown RBP27.41■■□□□ 1.98
RITA1-202ENST00000549621 EIF4A1P60842 406 aaKnown RBP27.41■■□□□ 1.98
RITA1-202ENST00000549621 TEFQ10587 303 aa27.41■■□□□ 1.98
RITA1-202ENST00000549621 N4BP2Q86UW6 1770 aaPredicted RBP27.4■■□□□ 1.98
RITA1-202ENST00000549621 ATP10DQ9P241 1426 aa27.4■■□□□ 1.98
RITA1-202ENST00000549621 NUCB1Q02818 461 aa27.39■■□□□ 1.98
RITA1-202ENST00000549621 NECTIN2Q92692 538 aa27.39■■□□□ 1.98
RITA1-202ENST00000549621 RAPGEF4Q8WZA2 1011 aa27.38■■□□□ 1.97
RITA1-202ENST00000549621 F6X3S4 739 aa27.38■■□□□ 1.97
RITA1-202ENST00000549621 KCNQ3O43525 872 aa27.38■■□□□ 1.97
RITA1-202ENST00000549621 FLIIQ13045 1269 aa27.38■■□□□ 1.97
RITA1-202ENST00000549621 PKD1L3Q7Z443 1732 aa27.37■■□□□ 1.97
RITA1-202ENST00000549621 SCN11AQ9UI33 1791 aa27.37■■□□□ 1.97
RITA1-202ENST00000549621 PLEKHG2Q9H7P9 1386 aa27.36■■□□□ 1.97
RITA1-202ENST00000549621 BTBD11A6QL63 1104 aa27.36■■□□□ 1.97
RITA1-202ENST00000549621 CSB-PGBD3P0DP91 1061 aa27.36■■□□□ 1.97
RITA1-202ENST00000549621 HDGFL1Q5TGJ6 251 aa27.36■■□□□ 1.97
RITA1-202ENST00000549621 GCC1Q96CN9 775 aa27.36■■□□□ 1.97
RITA1-202ENST00000549621 HOXB7P09629 217 aa27.35■■□□□ 1.97
RITA1-202ENST00000549621 TATP17735 454 aaPredicted RBP27.34■■□□□ 1.97
RITA1-202ENST00000549621 MEIS3Q99687 375 aa27.34■■□□□ 1.97
RITA1-202ENST00000549621 CCT4P50991 539 aaKnown RBP27.34■■□□□ 1.97
RITA1-202ENST00000549621 KDM6AO15550 1401 aaPredicted RBP27.33■■□□□ 1.97
RITA1-202ENST00000549621 PXDNLA1KZ92 1463 aa27.33■■□□□ 1.97
RITA1-202ENST00000549621 SLC4A10Q6U841 1118 aa27.33■■□□□ 1.96
RITA1-202ENST00000549621 CHD1LQ86WJ1 897 aa27.33■■□□□ 1.96
RITA1-202ENST00000549621 FKBP5Q13451 457 aaPredicted RBP27.32■■□□□ 1.96
RITA1-202ENST00000549621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.31■■□□□ 1.96
RITA1-202ENST00000549621 ANKRD44Q8N8A2 993 aa27.31■■□□□ 1.96
RITA1-202ENST00000549621 LNPKQ9C0E8 428 aa27.31■■□□□ 1.96
RITA1-202ENST00000549621 NOP58Q9Y2X3 529 aaKnown RBP27.31■■□□□ 1.96
RITA1-202ENST00000549621 SPG7Q9UQ90 795 aa27.3■■□□□ 1.96
RITA1-202ENST00000549621 PHKG2P15735 406 aa27.29■■□□□ 1.96
RITA1-202ENST00000549621 CEP85Q6P2H3 762 aa27.29■■□□□ 1.96
RITA1-202ENST00000549621 PRDM11Q9NQV5 511 aa27.29■■□□□ 1.96
RITA1-202ENST00000549621 HEG1Q9ULI3 1381 aa27.29■■□□□ 1.96
RITA1-202ENST00000549621 COL5A2P05997 1499 aaPredicted RBP27.28■■□□□ 1.96
RITA1-202ENST00000549621 PARP4Q9UKK3 1724 aaKnown RBP27.28■■□□□ 1.96
RITA1-202ENST00000549621 RPAP2Q8IXW5 612 aaPredicted RBP27.28■■□□□ 1.96
RITA1-202ENST00000549621 MRC1P22897 1456 aa27.27■■□□□ 1.96
RITA1-202ENST00000549621 EIF2S2P20042 333 aaKnown RBP27.27■■□□□ 1.96
RITA1-202ENST00000549621 ANKRD45Q5TZF3 282 aa27.27■■□□□ 1.96
RITA1-202ENST00000549621 SEC24BO95487 1268 aa27.26■■□□□ 1.95
RITA1-202ENST00000549621 PHAXQ9H814 394 aaKnown RBP27.26■■□□□ 1.95
RITA1-202ENST00000549621 WDR17Q8IZU2 1322 aa27.26■■□□□ 1.95
RITA1-202ENST00000549621 CHPF2Q9P2E5 772 aa27.26■■□□□ 1.95
RITA1-202ENST00000549621 ERICH6Q7L0X2 663 aa27.24■■□□□ 1.95
RITA1-202ENST00000549621 DCTPP1Q9H773 170 aa27.24■■□□□ 1.95
RITA1-202ENST00000549621 IFNL2Q8IZJ0 200 aa27.24■■□□□ 1.95
RITA1-202ENST00000549621 CHMP4AQ9BY43 222 aa27.24■■□□□ 1.95
RITA1-202ENST00000549621 GIGYF1O75420 1035 aaPredicted RBP27.23■■□□□ 1.95
RITA1-202ENST00000549621 SLC52A2Q9HAB3 445 aa27.23■■□□□ 1.95
RITA1-202ENST00000549621 CYP27B1O15528 508 aa27.23■■□□□ 1.95
RITA1-202ENST00000549621 ZBTB47Q9UFB7 747 aaPredicted RBP27.23■■□□□ 1.95
RITA1-202ENST00000549621 C5P01031 1676 aa27.22■■□□□ 1.95
RITA1-202ENST00000549621 ANP32EQ9BTT0 268 aa27.21■■□□□ 1.95
RITA1-202ENST00000549621 DDRGK1Q96HY6 314 aa27.2■■□□□ 1.94
RITA1-202ENST00000549621 ROBO1Q9Y6N7 1651 aa27.18■■□□□ 1.94
RITA1-202ENST00000549621 PRAMEF22A3QJZ6 481 aa27.18■■□□□ 1.94
RITA1-202ENST00000549621 GNAI2P04899 355 aa27.18■■□□□ 1.94
RITA1-202ENST00000549621 DCAF5Q96JK2 942 aa27.18■■□□□ 1.94
RITA1-202ENST00000549621 ANXA1P04083 346 aa27.17■■□□□ 1.94
RITA1-202ENST00000549621 GNAI3P08754 354 aa27.17■■□□□ 1.94
RITA1-202ENST00000549621 TOM1L2Q6ZVM7 507 aa27.17■■□□□ 1.94
RITA1-202ENST00000549621 ZNF790Q6PG37 636 aa27.17■■□□□ 1.94
RITA1-202ENST00000549621 DBF4Q9UBU7 674 aaPredicted RBP27.17■■□□□ 1.94
RITA1-202ENST00000549621 SHANK3Q9BYB0 1731 aa27.16■■□□□ 1.94
RITA1-202ENST00000549621 SLC39A6Q13433 755 aa27.16■■□□□ 1.94
RITA1-202ENST00000549621 NFATC2IPQ8NCF5 419 aa27.16■■□□□ 1.94
RITA1-202ENST00000549621 ADCY9O60503 1353 aa27.15■■□□□ 1.94
RITA1-202ENST00000549621 AHDC1Q5TGY3 1603 aaPredicted RBP27.15■■□□□ 1.94
RITA1-202ENST00000549621 HSP90AB1P08238 724 aaKnown RBP27.14■■□□□ 1.94
RITA1-202ENST00000549621 LTBP4Q8N2S1 1624 aa27.14■■□□□ 1.94
RITA1-202ENST00000549621 HMMRO75330 724 aa27.14■■□□□ 1.93
RITA1-202ENST00000549621 PROSER3Q2NL68 480 aa27.14■■□□□ 1.93
RITA1-202ENST00000549621 USP44Q9H0E7 712 aa27.14■■□□□ 1.93
RITA1-202ENST00000549621 BMP2KLQ5H9B9 411 aa27.13■■□□□ 1.93
RITA1-202ENST00000549621 CARD10Q9BWT7 1032 aa27.13■■□□□ 1.93
RITA1-202ENST00000549621 DNAAF4Q8WXU2 420 aa27.12■■□□□ 1.93
RITA1-202ENST00000549621 GLI3P10071 1580 aa27.12■■□□□ 1.93
RITA1-202ENST00000549621 PCDH11XQ9BZA7 1347 aa27.11■■□□□ 1.93
RITA1-202ENST00000549621 PCDH11YQ9BZA8 1340 aa27.11■■□□□ 1.93
RITA1-202ENST00000549621 PI4KAP2A4QPH2 592 aa27.11■■□□□ 1.93
RITA1-202ENST00000549621 PI4KAP1Q8N8J0 262 aa27.11■■□□□ 1.93
RITA1-202ENST00000549621 SRCIN1Q9C0H9 1055 aa27.11■■□□□ 1.93
RITA1-202ENST00000549621 BEND3Q5T5X7 828 aa27.11■■□□□ 1.93
RITA1-202ENST00000549621 LARP1Q6PKG0 1096 aaKnown RBP27.11■■□□□ 1.93
RITA1-202ENST00000549621 COL22A1Q8NFW1 1626 aaPredicted RBP27.1■■□□□ 1.93
RITA1-202ENST00000549621 ZCRB1Q8TBF4 217 aaKnown RBP27.09■■□□□ 1.93
RITA1-202ENST00000549621 LRRFIP2Q9Y608 721 aaKnown RBP27.09■■□□□ 1.93
RITA1-202ENST00000549621 PLEKHM2Q8IWE5 1019 aa27.09■■□□□ 1.93
RITA1-202ENST00000549621 STRN4Q9NRL3 753 aa27.09■■□□□ 1.93
RITA1-202ENST00000549621 UBTFL1P0CB47 393 aaPredicted RBP27.08■■□□□ 1.93
RITA1-202ENST00000549621 ZNF496Q96IT1 587 aaPredicted RBP27.08■■□□□ 1.93
RITA1-202ENST00000549621 TBC1D32Q96NH3 1257 aa27.08■■□□□ 1.93
RITA1-202ENST00000549621 UPF2Q9HAU5 1272 aaKnown RBP27.08■■□□□ 1.93
RITA1-202ENST00000549621 IL2RBP14784 551 aa27.07■■□□□ 1.92
RITA1-202ENST00000549621 PDIA6Q15084 440 aa27.07■■□□□ 1.92
RITA1-202ENST00000549621 DDX21Q9NR30 783 aaKnown RBP eCLIP27.07■■□□□ 1.92
RITA1-202ENST00000549621 HYPKQ9NX55 129 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms