RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 HMOX1P09601 288 aa13.75□□□□□ -0.21
PFDN5-206ENST00000548984 POLD1P28340 1107 aa13.75□□□□□ -0.21
PFDN5-206ENST00000548984 CNGB1Q14028 1251 aaPredicted RBP13.75□□□□□ -0.21
PFDN5-206ENST00000548984 ATG3Q9NT62 314 aa13.75□□□□□ -0.21
PFDN5-206ENST00000548984 ASAP1Q9ULH1 1129 aa13.75□□□□□ -0.21
PFDN5-206ENST00000548984 UBR3Q6ZT12 1888 aa13.74□□□□□ -0.21
PFDN5-206ENST00000548984 DCAF8L1A6NGE4 600 aa13.74□□□□□ -0.21
PFDN5-206ENST00000548984 ARXQ96QS3 562 aa13.74□□□□□ -0.21
PFDN5-206ENST00000548984 U2SURPO15042 1029 aaKnown RBP13.73□□□□□ -0.21
PFDN5-206ENST00000548984 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
PFDN5-206ENST00000548984 NUDCQ9Y266 331 aa13.73□□□□□ -0.21
PFDN5-206ENST00000548984 COL5A3P25940 1745 aaPredicted RBP13.73□□□□□ -0.21
PFDN5-206ENST00000548984 MSH5O43196 834 aa13.72□□□□□ -0.21
PFDN5-206ENST00000548984 SSFA2P28290 1259 aa13.72□□□□□ -0.21
PFDN5-206ENST00000548984 ATP6V1AP38606 617 aa13.72□□□□□ -0.21
PFDN5-206ENST00000548984 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
PFDN5-206ENST00000548984 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
PFDN5-206ENST00000548984 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.21
PFDN5-206ENST00000548984 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
PFDN5-206ENST00000548984 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.21
PFDN5-206ENST00000548984 CNTNAP4Q9C0A0 1308 aa13.7□□□□□ -0.22
PFDN5-206ENST00000548984 ITPK1Q13572 414 aa13.7□□□□□ -0.22
PFDN5-206ENST00000548984 MTHFSDQ2M296 383 aaKnown RBP13.7□□□□□ -0.22
PFDN5-206ENST00000548984 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
PFDN5-206ENST00000548984 SLC52A2Q9HAB3 445 aa13.7□□□□□ -0.22
PFDN5-206ENST00000548984 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
PFDN5-206ENST00000548984 RNMTO43148 476 aaKnown RBP13.69□□□□□ -0.22
PFDN5-206ENST00000548984 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
PFDN5-206ENST00000548984 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
PFDN5-206ENST00000548984 TJP1Q07157 1748 aa13.68□□□□□ -0.22
PFDN5-206ENST00000548984 GNPATO15228 680 aa13.68□□□□□ -0.22
PFDN5-206ENST00000548984 ADRA2BP18089 450 aa13.68□□□□□ -0.22
PFDN5-206ENST00000548984 RC3H1Q5TC82 1133 aaKnown RBP13.68□□□□□ -0.22
PFDN5-206ENST00000548984 GNAT3A8MTJ3 354 aa13.67□□□□□ -0.22
PFDN5-206ENST00000548984 PHF14O94880 888 aa13.67□□□□□ -0.22
PFDN5-206ENST00000548984 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
PFDN5-206ENST00000548984 RSPH6AQ9H0K4 717 aa13.67□□□□□ -0.22
PFDN5-206ENST00000548984 UBR2Q8IWV8 1755 aa13.66□□□□□ -0.22
PFDN5-206ENST00000548984 KCPQ6ZWJ8 1503 aa13.66□□□□□ -0.22
PFDN5-206ENST00000548984 FCHSD2O94868 740 aa13.66□□□□□ -0.22
PFDN5-206ENST00000548984 U2AF1L5P0DN76 240 aaPredicted RBP13.66□□□□□ -0.22
PFDN5-206ENST00000548984 U2AF1Q01081 240 aaKnown RBP eCLIP13.66□□□□□ -0.22
PFDN5-206ENST00000548984 SLC4A9Q96Q91 983 aa13.66□□□□□ -0.22
PFDN5-206ENST00000548984 LGR6Q9HBX8 967 aa13.66□□□□□ -0.22
PFDN5-206ENST00000548984 RTCBQ9Y3I0 505 aaKnown RBP13.66□□□□□ -0.22
PFDN5-206ENST00000548984 PTCD1O75127 700 aaKnown RBP13.65□□□□□ -0.22
PFDN5-206ENST00000548984 RALBP1Q15311 655 aa13.65□□□□□ -0.22
PFDN5-206ENST00000548984 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
PFDN5-206ENST00000548984 SIPA1L3O60292 1781 aaPredicted RBP13.65□□□□□ -0.22
PFDN5-206ENST00000548984 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
PFDN5-206ENST00000548984 TEFQ10587 303 aa13.64□□□□□ -0.23
PFDN5-206ENST00000548984 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
PFDN5-206ENST00000548984 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
PFDN5-206ENST00000548984 NEFMP07197 916 aa13.63□□□□□ -0.23
PFDN5-206ENST00000548984 TRAPPC3LQ5T215 181 aa13.63□□□□□ -0.23
PFDN5-206ENST00000548984 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
PFDN5-206ENST00000548984 VSIG10Q8N0Z9 540 aa13.63□□□□□ -0.23
PFDN5-206ENST00000548984 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
PFDN5-206ENST00000548984 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
PFDN5-206ENST00000548984 MYH14Q7Z406 1995 aaKnown RBP13.62□□□□□ -0.23
PFDN5-206ENST00000548984 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
PFDN5-206ENST00000548984 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
PFDN5-206ENST00000548984 PHACTR3Q96KR7 559 aa13.61□□□□□ -0.23
PFDN5-206ENST00000548984 PNNQ9H307 717 aaKnown RBP13.61□□□□□ -0.23
PFDN5-206ENST00000548984 HTATSF1O43719 755 aaKnown RBP13.6□□□□□ -0.23
PFDN5-206ENST00000548984 RFC4P35249 363 aa13.6□□□□□ -0.23
PFDN5-206ENST00000548984 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
PFDN5-206ENST00000548984 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
PFDN5-206ENST00000548984 NLGN1Q8N2Q7 840 aa13.6□□□□□ -0.23
PFDN5-206ENST00000548984 IL17REQ8NFR9 667 aa13.6□□□□□ -0.23
PFDN5-206ENST00000548984 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
PFDN5-206ENST00000548984 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
PFDN5-206ENST00000548984 DNAJC10Q8IXB1 793 aa13.59□□□□□ -0.23
PFDN5-206ENST00000548984 ARHGEF1Q92888 912 aaKnown RBP13.59□□□□□ -0.23
PFDN5-206ENST00000548984 MYBBP1AQ9BQG0 1328 aaKnown RBP13.59□□□□□ -0.23
PFDN5-206ENST00000548984 CYP19A1P11511 503 aaPredicted RBP13.58□□□□□ -0.24
PFDN5-206ENST00000548984 ZNF790Q6PG37 636 aa13.58□□□□□ -0.24
PFDN5-206ENST00000548984 SMIM5Q71RC9 77 aa13.58□□□□□ -0.24
PFDN5-206ENST00000548984 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
PFDN5-206ENST00000548984 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.24
PFDN5-206ENST00000548984 USP42Q9H9J4 1324 aaKnown RBP13.58□□□□□ -0.24
PFDN5-206ENST00000548984 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.24
PFDN5-206ENST00000548984 STARD3NLO95772 234 aa13.57□□□□□ -0.24
PFDN5-206ENST00000548984 MMP10P09238 476 aa13.57□□□□□ -0.24
PFDN5-206ENST00000548984 GYS1P13807 737 aa13.57□□□□□ -0.24
PFDN5-206ENST00000548984 YY1P25490 414 aa13.57□□□□□ -0.24
PFDN5-206ENST00000548984 GPR162Q16538 588 aa13.57□□□□□ -0.24
PFDN5-206ENST00000548984 INTS5Q6P9B9 1019 aaKnown RBP13.57□□□□□ -0.24
PFDN5-206ENST00000548984 FMNL2Q96PY5 1086 aa13.57□□□□□ -0.24
PFDN5-206ENST00000548984 SOS1Q07889 1333 aaPredicted RBP13.57□□□□□ -0.24
PFDN5-206ENST00000548984 MAPK8IP3Q9UPT6 1336 aa13.57□□□□□ -0.24
PFDN5-206ENST00000548984 KIF13BQ9NQT8 1826 aa13.57□□□□□ -0.24
PFDN5-206ENST00000548984 CHD4Q14839 1912 aa13.56□□□□□ -0.24
PFDN5-206ENST00000548984 COL15A1P39059 1388 aa13.56□□□□□ -0.24
PFDN5-206ENST00000548984 C10orf71Q711Q0 1435 aa13.56□□□□□ -0.24
PFDN5-206ENST00000548984 BTBD11A6QL63 1104 aa13.55□□□□□ -0.24
PFDN5-206ENST00000548984 ZNF496Q96IT1 587 aaPredicted RBP13.55□□□□□ -0.24
PFDN5-206ENST00000548984 DLG5Q8TDM6 1919 aa13.54□□□□□ -0.24
PFDN5-206ENST00000548984 GRIN3BO60391 1043 aa13.54□□□□□ -0.24
PFDN5-206ENST00000548984 ZPR1O75312 459 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms