RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GOLGB1Q14789 3259 aaKnown RBP23.76■■□□□ 1.39
CHMP1A-205ENST00000548650 VIRMAQ69YN4 1812 aaKnown RBP23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 PHF14O94880 888 aa23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 HSP90AB1P08238 724 aaKnown RBP23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 SSFA2P28290 1259 aa23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 GPR162Q16538 588 aa23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 ZNF530Q6P9A1 599 aaPredicted RBP23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 SMIM5Q71RC9 77 aa23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 DCAF5Q96JK2 942 aa23.75■■□□□ 1.39
CHMP1A-205ENST00000548650 ERVV-2B6SEH9 535 aa23.74■■□□□ 1.39
CHMP1A-205ENST00000548650 IL13P35225 146 aa23.74■■□□□ 1.39
CHMP1A-205ENST00000548650 AMOTQ4VCS5 1084 aa23.74■■□□□ 1.39
CHMP1A-205ENST00000548650 ATP6V1AP38606 617 aa23.73■■□□□ 1.39
CHMP1A-205ENST00000548650 ZNF784Q8NCA9 323 aaPredicted RBP23.73■■□□□ 1.39
CHMP1A-205ENST00000548650 C4AP0C0L4 1744 aa23.73■■□□□ 1.39
CHMP1A-205ENST00000548650 SULT6B1Q6IMI4 303 aa23.72■■□□□ 1.39
CHMP1A-205ENST00000548650 TJP1Q07157 1748 aa23.72■■□□□ 1.39
CHMP1A-205ENST00000548650 GNPATO15228 680 aa23.71■■□□□ 1.39
CHMP1A-205ENST00000548650 SLC4A9Q96Q91 983 aa23.71■■□□□ 1.39
CHMP1A-205ENST00000548650 MYH14Q7Z406 1995 aaKnown RBP23.71■■□□□ 1.39
CHMP1A-205ENST00000548650 PER1O15534 1290 aaPredicted RBP23.7■■□□□ 1.38
CHMP1A-205ENST00000548650 PELP1Q8IZL8 1130 aaKnown RBP23.7■■□□□ 1.38
CHMP1A-205ENST00000548650 YBX3P16989 372 aaKnown RBP eCLIP23.69■■□□□ 1.386e-9■■□□□ 14.5
CHMP1A-205ENST00000548650 CD2APQ9Y5K6 639 aa23.69■■□□□ 1.38
CHMP1A-205ENST00000548650 ADAMTS7Q9UKP4 1686 aa23.69■■□□□ 1.38
CHMP1A-205ENST00000548650 MRC1P22897 1456 aa23.68■■□□□ 1.38
CHMP1A-205ENST00000548650 KIF13BQ9NQT8 1826 aa23.68■■□□□ 1.38
CHMP1A-205ENST00000548650 C1orf141Q5JVX7 400 aa23.68■■□□□ 1.38
CHMP1A-205ENST00000548650 COL3A1P02461 1466 aaPredicted RBP23.68■■□□□ 1.38
CHMP1A-205ENST00000548650 MTHFSP49914 203 aa23.67■■□□□ 1.38
CHMP1A-205ENST00000548650 KIAA1551Q9HCM1 1747 aa23.67■■□□□ 1.38
CHMP1A-205ENST00000548650 CABP4P57796 275 aa23.66■■□□□ 1.38
CHMP1A-205ENST00000548650 NPC1L1Q9UHC9 1359 aa23.65■■□□□ 1.38
CHMP1A-205ENST00000548650 CNTNAP4Q9C0A0 1308 aa23.65■■□□□ 1.38
CHMP1A-205ENST00000548650 RBM42Q9BTD8 480 aaKnown RBP23.65■■□□□ 1.38
CHMP1A-205ENST00000548650 CC2D1BQ5T0F9 858 aaKnown RBP23.64■■□□□ 1.37
CHMP1A-205ENST00000548650 RC3H1Q5TC82 1133 aaKnown RBP23.61■■□□□ 1.37
CHMP1A-205ENST00000548650 RTCBQ9Y3I0 505 aaKnown RBP23.61■■□□□ 1.37
CHMP1A-205ENST00000548650 GRIN3BO60391 1043 aa23.6■■□□□ 1.37
CHMP1A-205ENST00000548650 HMOX1P09601 288 aa23.6■■□□□ 1.37
CHMP1A-205ENST00000548650 AKAP4Q5JQC9 854 aa23.6■■□□□ 1.37
CHMP1A-205ENST00000548650 NFATC2IPQ8NCF5 419 aa23.6■■□□□ 1.37
CHMP1A-205ENST00000548650 UBR2Q8IWV8 1755 aa23.6■■□□□ 1.37
CHMP1A-205ENST00000548650 ADRA2BP18089 450 aa23.59■■□□□ 1.37
CHMP1A-205ENST00000548650 KCPQ6ZWJ8 1503 aa23.59■■□□□ 1.37
CHMP1A-205ENST00000548650 PTCD1O75127 700 aaKnown RBP23.58■■□□□ 1.37
CHMP1A-205ENST00000548650 MMP10P09238 476 aa23.58■■□□□ 1.37
CHMP1A-205ENST00000548650 C10orf71Q711Q0 1435 aa23.58■■□□□ 1.36
CHMP1A-205ENST00000548650 N4BP2Q86UW6 1770 aaPredicted RBP23.57■■□□□ 1.36
CHMP1A-205ENST00000548650 PXDNLA1KZ92 1463 aa23.57■■□□□ 1.36
CHMP1A-205ENST00000548650 DIAPH1O60610 1272 aaKnown RBP23.57■■□□□ 1.36
CHMP1A-205ENST00000548650 TRAPPC3LQ5T215 181 aa23.57■■□□□ 1.36
CHMP1A-205ENST00000548650 RPS6KA4O75676 772 aa23.56■■□□□ 1.36
CHMP1A-205ENST00000548650 ARHGEF1Q92888 912 aaKnown RBP23.56■■□□□ 1.36
CHMP1A-205ENST00000548650 SLC52A2Q9HAB3 445 aa23.56■■□□□ 1.36
CHMP1A-205ENST00000548650 BRCA1P38398 1863 aaKnown RBP23.56■■□□□ 1.36
CHMP1A-205ENST00000548650 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
CHMP1A-205ENST00000548650 CRKLP46109 303 aaKnown RBP23.54■■□□□ 1.36
CHMP1A-205ENST00000548650 LGR6Q9HBX8 967 aa23.54■■□□□ 1.36
CHMP1A-205ENST00000548650 RNMTO43148 476 aaKnown RBP23.53■■□□□ 1.36
CHMP1A-205ENST00000548650 GYS1P13807 737 aa23.53■■□□□ 1.36
CHMP1A-205ENST00000548650 MTHFSDQ2M296 383 aaKnown RBP23.53■■□□□ 1.36
CHMP1A-205ENST00000548650 ADCY9O60503 1353 aa23.52■■□□□ 1.36
CHMP1A-205ENST00000548650 NLGN1Q8N2Q7 840 aa23.52■■□□□ 1.36
CHMP1A-205ENST00000548650 RFC4P35249 363 aa23.51■■□□□ 1.35
CHMP1A-205ENST00000548650 WWC3Q9ULE0 1092 aa23.51■■□□□ 1.35
CHMP1A-205ENST00000548650 ATP10DQ9P241 1426 aa23.5■■□□□ 1.35
CHMP1A-205ENST00000548650 CNGB1Q14028 1251 aaPredicted RBP23.5■■□□□ 1.35
CHMP1A-205ENST00000548650 USP42Q9H9J4 1324 aaKnown RBP23.5■■□□□ 1.35
CHMP1A-205ENST00000548650 SLC39A6Q13433 755 aa23.48■■□□□ 1.35
CHMP1A-205ENST00000548650 INTS5Q6P9B9 1019 aaKnown RBP23.48■■□□□ 1.35
CHMP1A-205ENST00000548650 DNAJC10Q8IXB1 793 aa23.48■■□□□ 1.35
CHMP1A-205ENST00000548650 SRP68Q9UHB9 627 aaKnown RBP23.47■■□□□ 1.35
CHMP1A-205ENST00000548650 C1QTNF8P60827 252 aa23.46■■□□□ 1.35
CHMP1A-205ENST00000548650 ARFGEF1Q9Y6D6 1849 aa23.45■■□□□ 1.34
CHMP1A-205ENST00000548650 SOS1Q07889 1333 aaPredicted RBP23.45■■□□□ 1.34
CHMP1A-205ENST00000548650 U2SURPO15042 1029 aaKnown RBP23.45■■□□□ 1.34
CHMP1A-205ENST00000548650 GIGYF1O75420 1035 aaPredicted RBP23.45■■□□□ 1.34
CHMP1A-205ENST00000548650 CCDC87Q9NVE4 849 aa23.45■■□□□ 1.34
CHMP1A-205ENST00000548650 CYP19A1P11511 503 aaPredicted RBP23.43■■□□□ 1.34
CHMP1A-205ENST00000548650 TGFB2P61812 414 aa23.43■■□□□ 1.34
CHMP1A-205ENST00000548650 DDR1Q08345 913 aa23.43■■□□□ 1.34
CHMP1A-205ENST00000548650 FKBP8Q14318 412 aa23.43■■□□□ 1.34
CHMP1A-205ENST00000548650 PARP3Q9Y6F1 533 aa23.43■■□□□ 1.34
CHMP1A-205ENST00000548650 AFDNP55196 1824 aaKnown RBP23.43■■□□□ 1.34
CHMP1A-205ENST00000548650 NRXN2Q9P2S2 1712 aa23.42■■□□□ 1.34
CHMP1A-205ENST00000548650 GAS2L2Q8NHY3 880 aa23.42■■□□□ 1.34
CHMP1A-205ENST00000548650 SCN7AQ01118 1682 aa23.41■■□□□ 1.34
CHMP1A-205ENST00000548650 COL15A1P39059 1388 aa23.41■■□□□ 1.34
CHMP1A-205ENST00000548650 A0A0G2JLW4 131 aa23.4■■□□□ 1.34
CHMP1A-205ENST00000548650 VSIG10Q8N0Z9 540 aa23.4■■□□□ 1.34
CHMP1A-205ENST00000548650 ZBTB1Q9Y2K1 713 aa23.4■■□□□ 1.34
CHMP1A-205ENST00000548650 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
CHMP1A-205ENST00000548650 DPEP1P16444 411 aa23.39■■□□□ 1.33
CHMP1A-205ENST00000548650 DLEC1Q9Y238 1755 aa23.38■■□□□ 1.33
CHMP1A-205ENST00000548650 GNAT3A8MTJ3 354 aa23.38■■□□□ 1.33
CHMP1A-205ENST00000548650 IL17REQ8NFR9 667 aa23.38■■□□□ 1.33
CHMP1A-205ENST00000548650 CFAP53Q96M91 514 aa23.38■■□□□ 1.33
CHMP1A-205ENST00000548650 RSPH6AQ9H0K4 717 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms