RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 EMILIN1Q9Y6C2 1016 aa20.4■□□□□ 0.86
C12orf49-204ENST00000548356 C10orf71Q711Q0 1435 aa20.39■□□□□ 0.85
C12orf49-204ENST00000548356 NLGN1Q8N2Q7 840 aa20.39■□□□□ 0.85
C12orf49-204ENST00000548356 A0A0G2JLW4 131 aa20.37■□□□□ 0.85
C12orf49-204ENST00000548356 TRAPPC3LQ5T215 181 aa20.37■□□□□ 0.85
C12orf49-204ENST00000548356 IFNL2Q8IZJ0 200 aa20.37■□□□□ 0.85
C12orf49-204ENST00000548356 NMRK2Q9NPI5 230 aa20.37■□□□□ 0.85
C12orf49-204ENST00000548356 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
C12orf49-204ENST00000548356 PHKG2P15735 406 aa20.36■□□□□ 0.85
C12orf49-204ENST00000548356 ARHGAP27Q6ZUM4 889 aa20.36■□□□□ 0.85
C12orf49-204ENST00000548356 RBM46Q8TBY0 533 aaKnown RBP20.36■□□□□ 0.85
C12orf49-204ENST00000548356 RTCBQ9Y3I0 505 aaKnown RBP20.36■□□□□ 0.85
C12orf49-204ENST00000548356 N4BP2Q86UW6 1770 aaPredicted RBP20.36■□□□□ 0.85
C12orf49-204ENST00000548356 KDRP35968 1356 aa20.35■□□□□ 0.85
C12orf49-204ENST00000548356 WASHC2AQ641Q2 1341 aa20.35■□□□□ 0.85
C12orf49-204ENST00000548356 ADRA2BP18089 450 aa20.35■□□□□ 0.85
C12orf49-204ENST00000548356 CDCA8Q53HL2 280 aa20.35■□□□□ 0.85
C12orf49-204ENST00000548356 CCDC87Q9NVE4 849 aa20.35■□□□□ 0.85
C12orf49-204ENST00000548356 DPEP1P16444 411 aa20.34■□□□□ 0.85
C12orf49-204ENST00000548356 EYA1Q99502 592 aa20.34■□□□□ 0.85
C12orf49-204ENST00000548356 PLEKHG2Q9H7P9 1386 aa20.34■□□□□ 0.85
C12orf49-204ENST00000548356 ANKRD26Q9UPS8 1709 aa20.33■□□□□ 0.85
C12orf49-204ENST00000548356 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
C12orf49-204ENST00000548356 FCHSD2O94868 740 aa20.33■□□□□ 0.85
C12orf49-204ENST00000548356 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.85
C12orf49-204ENST00000548356 WDR90Q96KV7 1748 aa20.33■□□□□ 0.84
C12orf49-204ENST00000548356 ZNF831Q5JPB2 1677 aa20.32■□□□□ 0.84
C12orf49-204ENST00000548356 ARHGEF1Q92888 912 aaKnown RBP20.32■□□□□ 0.84
C12orf49-204ENST00000548356 CARD14Q9BXL6 1004 aa20.32■□□□□ 0.84
C12orf49-204ENST00000548356 C4AP0C0L4 1744 aa20.32■□□□□ 0.84
C12orf49-204ENST00000548356 GYS1P13807 737 aa20.31■□□□□ 0.84
C12orf49-204ENST00000548356 FSTL1Q12841 308 aa20.31■□□□□ 0.84
C12orf49-204ENST00000548356 C9orf131Q5VYM1 1079 aa20.31■□□□□ 0.84
C12orf49-204ENST00000548356 C16orf71Q8IYS4 520 aaPredicted RBP20.31■□□□□ 0.84
C12orf49-204ENST00000548356 JMYQ8N9B5 988 aa20.31■□□□□ 0.84
C12orf49-204ENST00000548356 KLRG1Q96E93 195 aa20.31■□□□□ 0.84
C12orf49-204ENST00000548356 PARP3Q9Y6F1 533 aa20.31■□□□□ 0.84
C12orf49-204ENST00000548356 CNTNAP4Q9C0A0 1308 aa20.3■□□□□ 0.84
C12orf49-204ENST00000548356 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
C12orf49-204ENST00000548356 BRCA1P38398 1863 aaKnown RBP20.3■□□□□ 0.84
C12orf49-204ENST00000548356 ERVV-2B6SEH9 535 aa20.29■□□□□ 0.84
C12orf49-204ENST00000548356 KCNA3P22001 575 aa20.29■□□□□ 0.84
C12orf49-204ENST00000548356 RFC4P35249 363 aa20.29■□□□□ 0.84
C12orf49-204ENST00000548356 RPS6KA4O75676 772 aa20.28■□□□□ 0.84
C12orf49-204ENST00000548356 ARFGEF1Q9Y6D6 1849 aa20.27■□□□□ 0.84
C12orf49-204ENST00000548356 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
C12orf49-204ENST00000548356 PIM2Q9P1W9 311 aa20.27■□□□□ 0.84
C12orf49-204ENST00000548356 COL5A3P25940 1745 aaPredicted RBP20.27■□□□□ 0.83
C12orf49-204ENST00000548356 KDM2BQ8NHM5 1336 aa20.27■□□□□ 0.83
C12orf49-204ENST00000548356 COL13A1Q5TAT6 717 aaPredicted RBP20.26■□□□□ 0.83
C12orf49-204ENST00000548356 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
C12orf49-204ENST00000548356 HSP90AB1P08238 724 aaKnown RBP20.25■□□□□ 0.83
C12orf49-204ENST00000548356 HTRA3P83110 453 aa20.25■□□□□ 0.83
C12orf49-204ENST00000548356 POLKQ9UBT6 870 aa20.25■□□□□ 0.83
C12orf49-204ENST00000548356 KCPQ6ZWJ8 1503 aa20.24■□□□□ 0.83
C12orf49-204ENST00000548356 DALRD3Q5D0E6 543 aaKnown RBP20.24■□□□□ 0.83
C12orf49-204ENST00000548356 EIF4A2Q14240 407 aaKnown RBP20.23■□□□□ 0.83
C12orf49-204ENST00000548356 RNF181Q9P0P0 153 aa20.22■□□□□ 0.83
C12orf49-204ENST00000548356 RRAGCQ9HB90 399 aa20.21■□□□□ 0.83
C12orf49-204ENST00000548356 PCNTO95613 3336 aa20.2■□□□□ 0.82
C12orf49-204ENST00000548356 MYH14Q7Z406 1995 aaKnown RBP20.2■□□□□ 0.82
C12orf49-204ENST00000548356 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
C12orf49-204ENST00000548356 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
C12orf49-204ENST00000548356 CABP4P57796 275 aa20.19■□□□□ 0.82
C12orf49-204ENST00000548356 DDR1Q08345 913 aa20.19■□□□□ 0.82
C12orf49-204ENST00000548356 PLEKHO1Q53GL0 409 aaPredicted RBP20.19■□□□□ 0.82
C12orf49-204ENST00000548356 SMC1BQ8NDV3 1235 aa20.19■□□□□ 0.82
C12orf49-204ENST00000548356 USP42Q9H9J4 1324 aaKnown RBP20.19■□□□□ 0.82
C12orf49-204ENST00000548356 CRKLP46109 303 aaKnown RBP20.18■□□□□ 0.82
C12orf49-204ENST00000548356 FKBP8Q14318 412 aa20.18■□□□□ 0.82
C12orf49-204ENST00000548356 SRP68Q9UHB9 627 aaKnown RBP20.18■□□□□ 0.82
C12orf49-204ENST00000548356 ZC3H4Q9UPT8 1303 aaKnown RBP20.18■□□□□ 0.82
C12orf49-204ENST00000548356 AMOTQ4VCS5 1084 aa20.17■□□□□ 0.82
C12orf49-204ENST00000548356 TNS4Q8IZW8 715 aa20.17■□□□□ 0.82
C12orf49-204ENST00000548356 CHRNA5P30532 468 aa20.16■□□□□ 0.82
C12orf49-204ENST00000548356 ZNF530Q6P9A1 599 aaPredicted RBP20.16■□□□□ 0.82
C12orf49-204ENST00000548356 PTCD1O75127 700 aaKnown RBP20.15■□□□□ 0.82
C12orf49-204ENST00000548356 PRELPP51888 382 aa20.15■□□□□ 0.82
C12orf49-204ENST00000548356 SBF1O95248 1867 aa20.15■□□□□ 0.82
C12orf49-204ENST00000548356 POLRMTO00411 1230 aaKnown RBP20.14■□□□□ 0.81
C12orf49-204ENST00000548356 CAPN15O75808 1086 aa20.14■□□□□ 0.81
C12orf49-204ENST00000548356 TM4SF1P30408 202 aa20.14■□□□□ 0.81
C12orf49-204ENST00000548356 MTHFSP49914 203 aa20.14■□□□□ 0.81
C12orf49-204ENST00000548356 TNNT2P45379 298 aaPredicted RBP20.12■□□□□ 0.81
C12orf49-204ENST00000548356 NFATC2IPQ8NCF5 419 aa20.12■□□□□ 0.81
C12orf49-204ENST00000548356 TJP1Q07157 1748 aa20.11■□□□□ 0.81
C12orf49-204ENST00000548356 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
C12orf49-204ENST00000548356 INTS5Q6P9B9 1019 aaKnown RBP20.11■□□□□ 0.81
C12orf49-204ENST00000548356 ADAMTS7Q9UKP4 1686 aa20.1■□□□□ 0.81
C12orf49-204ENST00000548356 GLTPD2A6NH11 291 aa20.1■□□□□ 0.81
C12orf49-204ENST00000548356 ZPR1O75312 459 aa20.1■□□□□ 0.81
C12orf49-204ENST00000548356 VEGFAP15692 232 aaPredicted RBP20.1■□□□□ 0.81
C12orf49-204ENST00000548356 LMNB1P20700 586 aa20.1■□□□□ 0.81
C12orf49-204ENST00000548356 RASSF7Q02833 373 aa20.09■□□□□ 0.81
C12orf49-204ENST00000548356 USPL1Q5W0Q7 1092 aa20.08■□□□□ 0.81
C12orf49-204ENST00000548356 HSPA1AP0DMV8 641 aaKnown RBP20.07■□□□□ 0.8
C12orf49-204ENST00000548356 HSPA1BP0DMV9 641 aaKnown RBP20.07■□□□□ 0.8
C12orf49-204ENST00000548356 SOS1Q07889 1333 aaPredicted RBP20.06■□□□□ 0.8
C12orf49-204ENST00000548356 AEBP1Q8IUX7 1158 aa20.06■□□□□ 0.8
C12orf49-204ENST00000548356 NFIXQ14938 502 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms