RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 NOD1Q9Y239 953 aa8.21□□□□□ -1.1
DEPDC4-205ENST00000548313 LMOD1P29536 600 aaPredicted RBP8.2□□□□□ -1.1
DEPDC4-205ENST00000548313 NCOA4Q13772 614 aa8.2□□□□□ -1.1
DEPDC4-205ENST00000548313 OXLD1Q5BKU9 147 aa8.2□□□□□ -1.1
DEPDC4-205ENST00000548313 CYLDQ9NQC7 956 aa8.2□□□□□ -1.1
DEPDC4-205ENST00000548313 ENAMQ9NRM1 1142 aa8.2□□□□□ -1.1
DEPDC4-205ENST00000548313 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
DEPDC4-205ENST00000548313 TRIM50Q86XT4 487 aa8.19□□□□□ -1.1
DEPDC4-205ENST00000548313 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
DEPDC4-205ENST00000548313 SENP3-EIF4A1A0A087X0R7 540 aa8.18□□□□□ -1.1
DEPDC4-205ENST00000548313 ADD1P35611 737 aaKnown RBP8.18□□□□□ -1.1
DEPDC4-205ENST00000548313 SCTRP47872 440 aa8.18□□□□□ -1.1
DEPDC4-205ENST00000548313 LYPD4Q6UWN0 246 aa8.18□□□□□ -1.1
DEPDC4-205ENST00000548313 CYP2U1Q7Z449 544 aa8.18□□□□□ -1.1
DEPDC4-205ENST00000548313 DEPDC4Q8N2C3 294 aa8.18□□□□□ -1.1
DEPDC4-205ENST00000548313 MKRN1Q9UHC7 482 aaKnown RBP8.18□□□□□ -1.1
DEPDC4-205ENST00000548313 ADH1AP07327 375 aa8.17□□□□□ -1.1
DEPDC4-205ENST00000548313 ATP1A2P50993 1020 aa8.17□□□□□ -1.1
DEPDC4-205ENST00000548313 KANK4Q5T7N3 995 aaPredicted RBP8.17□□□□□ -1.1
DEPDC4-205ENST00000548313 OSBPL3Q9H4L5 887 aa8.17□□□□□ -1.1
DEPDC4-205ENST00000548313 ZNF395Q9H8N7 513 aaPredicted RBP8.17□□□□□ -1.1
DEPDC4-205ENST00000548313 VRTNQ9H8Y1 702 aa8.17□□□□□ -1.1
DEPDC4-205ENST00000548313 PPP1R15AO75807 674 aaPredicted RBP8.16□□□□□ -1.1
DEPDC4-205ENST00000548313 GNRH1P01148 92 aa8.16□□□□□ -1.1
DEPDC4-205ENST00000548313 PHF20L1A8MW92 1017 aa8.15□□□□□ -1.1
DEPDC4-205ENST00000548313 CELA2BP08218 269 aaPredicted RBP8.15□□□□□ -1.1
DEPDC4-205ENST00000548313 RFX1P22670 979 aa8.15□□□□□ -1.1
DEPDC4-205ENST00000548313 SRPK2P78362 688 aaKnown RBP8.15□□□□□ -1.1
DEPDC4-205ENST00000548313 PBXIP1Q96AQ6 731 aa8.15□□□□□ -1.1
DEPDC4-205ENST00000548313 PCDHGA11Q9Y5H2 935 aa8.15□□□□□ -1.1
DEPDC4-205ENST00000548313 MSTNO14793 375 aa8.14□□□□□ -1.11
DEPDC4-205ENST00000548313 PTGIRP43119 386 aa8.14□□□□□ -1.11
DEPDC4-205ENST00000548313 GTF2IP78347 998 aa8.14□□□□□ -1.11
DEPDC4-205ENST00000548313 LYSMD3Q7Z3D4 306 aa8.14□□□□□ -1.11
DEPDC4-205ENST00000548313 LARGE2Q8N3Y3 721 aa8.14□□□□□ -1.11
DEPDC4-205ENST00000548313 GMCL1Q96IK5 515 aa8.14□□□□□ -1.11
DEPDC4-205ENST00000548313 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
DEPDC4-205ENST00000548313 LARP1Q6PKG0 1096 aaKnown RBP8.13□□□□□ -1.11
DEPDC4-205ENST00000548313 OGFOD1Q8N543 542 aa8.13□□□□□ -1.11
DEPDC4-205ENST00000548313 KDF1Q8NAX2 398 aaPredicted RBP8.13□□□□□ -1.11
DEPDC4-205ENST00000548313 DNAAF2Q9NVR5 837 aaKnown RBP8.13□□□□□ -1.11
DEPDC4-205ENST00000548313 FAM196BA6NMK8 535 aa8.12□□□□□ -1.11
DEPDC4-205ENST00000548313 RASA1P20936 1047 aa8.12□□□□□ -1.11
DEPDC4-205ENST00000548313 GAS6Q14393 721 aa8.12□□□□□ -1.11
DEPDC4-205ENST00000548313 ESCO1Q5FWF5 840 aa8.12□□□□□ -1.11
DEPDC4-205ENST00000548313 FOXD4L5Q5VV16 416 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-205ENST00000548313 BEND7Q8N7W2 519 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-205ENST00000548313 ARID3AQ99856 593 aa8.12□□□□□ -1.11
DEPDC4-205ENST00000548313 ACIN1Q9UKV3 1341 aaKnown RBP8.11□□□□□ -1.11
DEPDC4-205ENST00000548313 WASLO00401 505 aaPredicted RBP8.11□□□□□ -1.11
DEPDC4-205ENST00000548313 ZBTB7BO15156 539 aaPredicted RBP8.11□□□□□ -1.11
DEPDC4-205ENST00000548313 PODNQ7Z5L7 613 aa8.11□□□□□ -1.11
DEPDC4-205ENST00000548313 MBIPQ9NS73 344 aa8.11□□□□□ -1.11
DEPDC4-205ENST00000548313 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 A0A1W2PRU2 124 aa8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 ATG7O95352 703 aa8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 CLDN10P78369 228 aa8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 PSME1Q06323 249 aa8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 CLN3Q13286 438 aa8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 PTK7Q13308 1070 aa8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 XAGE2Q96GT9 111 aa8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 DCAF5Q96JK2 942 aa8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 CUEDC1Q9NWM3 386 aaPredicted RBP8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 RBM19Q9Y4C8 960 aaKnown RBP8.1□□□□□ -1.11
DEPDC4-205ENST00000548313 RNF144AP50876 292 aaPredicted RBP8.09□□□□□ -1.11
DEPDC4-205ENST00000548313 ELOAQ14241 798 aaKnown RBP8.09□□□□□ -1.11
DEPDC4-205ENST00000548313 PLA2G4EQ3MJ16 856 aa8.09□□□□□ -1.11
DEPDC4-205ENST00000548313 CCDC102BQ68D86 513 aa8.09□□□□□ -1.11
DEPDC4-205ENST00000548313 TRIM22Q8IYM9 498 aa8.09□□□□□ -1.11
DEPDC4-205ENST00000548313 SIX5Q8N196 739 aa8.09□□□□□ -1.11
DEPDC4-205ENST00000548313 ESYT1Q9BSJ8 1104 aa8.09□□□□□ -1.11
DEPDC4-205ENST00000548313 CNTNAP5Q8WYK1 1306 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L15C9J2P7 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L10C9JJH3 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L13C9JLJ4 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L12C9JPN9 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L11C9JVI0 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L21D6R901 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L18D6R9N7 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L22D6RA61 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L17D6RBQ6 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L19D6RCP7 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L20D6RJB6 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 BACH1O14867 736 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 ADAM23O75077 832 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 INHAP05111 366 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 GPC1P35052 558 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 SCNN1DP51172 638 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 GDF10P55107 478 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 USP17L24Q0WX57 530 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 CRTC2Q53ET0 693 aaPredicted RBP8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 CDCA8Q53HL2 280 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 NEDD1Q8NHV4 660 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 NLRP3Q96P20 1036 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 SPOCK3Q9BQ16 436 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 ARHGEF10LQ9HCE6 1279 aa8.08□□□□□ -1.12
DEPDC4-205ENST00000548313 M0R2N6 131 aa8.07□□□□□ -1.12
DEPDC4-205ENST00000548313 BCRP11274 1271 aa8.07□□□□□ -1.12
DEPDC4-205ENST00000548313 PRICKLE2Q7Z3G6 844 aa8.07□□□□□ -1.12
DEPDC4-205ENST00000548313 ANKMY2Q8IV38 441 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms