RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-211ENST00000548247 KIF24Q5T7B8 1368 aa18.43■□□□□ 0.54
RACGAP1-211ENST00000548247 NCAPD2Q15021 1401 aa18.43■□□□□ 0.54
RACGAP1-211ENST00000548247 COL13A1Q5TAT6 717 aaPredicted RBP18.43■□□□□ 0.54
RACGAP1-211ENST00000548247 TMOD3Q9NYL9 352 aa18.43■□□□□ 0.54
RACGAP1-211ENST00000548247 EMILIN1Q9Y6C2 1016 aa18.43■□□□□ 0.54
RACGAP1-211ENST00000548247 C10orf71Q711Q0 1435 aa18.42■□□□□ 0.54
RACGAP1-211ENST00000548247 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
RACGAP1-211ENST00000548247 DPEP1P16444 411 aa18.41■□□□□ 0.54
RACGAP1-211ENST00000548247 RBM46Q8TBY0 533 aaKnown RBP18.41■□□□□ 0.54
RACGAP1-211ENST00000548247 ATG3Q9NT62 314 aa18.41■□□□□ 0.54
RACGAP1-211ENST00000548247 SPG7Q9UQ90 795 aa18.41■□□□□ 0.54
RACGAP1-211ENST00000548247 BRCA1P38398 1863 aaKnown RBP18.4■□□□□ 0.54
RACGAP1-211ENST00000548247 FCHSD2O94868 740 aa18.4■□□□□ 0.54
RACGAP1-211ENST00000548247 KLRG1Q96E93 195 aa18.4■□□□□ 0.54
RACGAP1-211ENST00000548247 TMF1P82094 1093 aa18.39■□□□□ 0.53
RACGAP1-211ENST00000548247 TRAPPC3LQ5T215 181 aa18.39■□□□□ 0.53
RACGAP1-211ENST00000548247 C9orf131Q5VYM1 1079 aa18.39■□□□□ 0.53
RACGAP1-211ENST00000548247 NLGN1Q8N2Q7 840 aa18.39■□□□□ 0.53
RACGAP1-211ENST00000548247 JMYQ8N9B5 988 aa18.39■□□□□ 0.53
RACGAP1-211ENST00000548247 SLC4A9Q96Q91 983 aa18.39■□□□□ 0.53
RACGAP1-211ENST00000548247 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
RACGAP1-211ENST00000548247 PHKG2P15735 406 aa18.38■□□□□ 0.53
RACGAP1-211ENST00000548247 KCNA3P22001 575 aa18.38■□□□□ 0.53
RACGAP1-211ENST00000548247 ARHGEF1Q92888 912 aaKnown RBP18.38■□□□□ 0.53
RACGAP1-211ENST00000548247 RTCBQ9Y3I0 505 aaKnown RBP18.38■□□□□ 0.53
RACGAP1-211ENST00000548247 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
RACGAP1-211ENST00000548247 GYS1P13807 737 aa18.37■□□□□ 0.53
RACGAP1-211ENST00000548247 EYA1Q99502 592 aa18.37■□□□□ 0.53
RACGAP1-211ENST00000548247 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.37■□□□□ 0.539e-7■■□□□ 14.2
RACGAP1-211ENST00000548247 KDRP35968 1356 aa18.37■□□□□ 0.53
RACGAP1-211ENST00000548247 CAPN15O75808 1086 aa18.36■□□□□ 0.53
RACGAP1-211ENST00000548247 IFNL2Q8IZJ0 200 aa18.36■□□□□ 0.53
RACGAP1-211ENST00000548247 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
RACGAP1-211ENST00000548247 CCDC87Q9NVE4 849 aa18.36■□□□□ 0.53
RACGAP1-211ENST00000548247 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
RACGAP1-211ENST00000548247 KCPQ6ZWJ8 1503 aa18.35■□□□□ 0.53
RACGAP1-211ENST00000548247 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
RACGAP1-211ENST00000548247 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
RACGAP1-211ENST00000548247 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
RACGAP1-211ENST00000548247 FSTL1Q12841 308 aa18.34■□□□□ 0.53
RACGAP1-211ENST00000548247 ANKRD26Q9UPS8 1709 aa18.34■□□□□ 0.53
RACGAP1-211ENST00000548247 PLEKHG2Q9H7P9 1386 aa18.33■□□□□ 0.53
RACGAP1-211ENST00000548247 WASHC2AQ641Q2 1341 aa18.33■□□□□ 0.53
RACGAP1-211ENST00000548247 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.53
RACGAP1-211ENST00000548247 COL5A3P25940 1745 aaPredicted RBP18.33■□□□□ 0.52
RACGAP1-211ENST00000548247 RC3H1Q5TC82 1133 aaKnown RBP18.33■□□□□ 0.52
RACGAP1-211ENST00000548247 RBM42Q9BTD8 480 aaKnown RBP18.33■□□□□ 0.52
RACGAP1-211ENST00000548247 RRAGCQ9HB90 399 aa18.33■□□□□ 0.52
RACGAP1-211ENST00000548247 TIMELESSQ9UNS1 1208 aa18.33■□□□□ 0.52
RACGAP1-211ENST00000548247 PARP3Q9Y6F1 533 aa18.33■□□□□ 0.52
RACGAP1-211ENST00000548247 ZNF831Q5JPB2 1677 aa18.32■□□□□ 0.52
RACGAP1-211ENST00000548247 RPS6KA4O75676 772 aa18.32■□□□□ 0.52
RACGAP1-211ENST00000548247 ADRA2BP18089 450 aa18.32■□□□□ 0.52
RACGAP1-211ENST00000548247 MYH14Q7Z406 1995 aaKnown RBP18.31■□□□□ 0.52
RACGAP1-211ENST00000548247 RFC4P35249 363 aa18.31■□□□□ 0.52
RACGAP1-211ENST00000548247 TNS4Q8IZW8 715 aa18.31■□□□□ 0.52
RACGAP1-211ENST00000548247 DCAF5Q96JK2 942 aa18.31■□□□□ 0.52
RACGAP1-211ENST00000548247 PIM2Q9P1W9 311 aa18.31■□□□□ 0.52
RACGAP1-211ENST00000548247 KDM2BQ8NHM5 1336 aa18.3■□□□□ 0.52
RACGAP1-211ENST00000548247 CNTNAP4Q9C0A0 1308 aa18.3■□□□□ 0.52
RACGAP1-211ENST00000548247 RNF181Q9P0P0 153 aa18.3■□□□□ 0.52
RACGAP1-211ENST00000548247 SBF1O95248 1867 aa18.29■□□□□ 0.52
RACGAP1-211ENST00000548247 DALRD3Q5D0E6 543 aaKnown RBP18.28■□□□□ 0.52
RACGAP1-211ENST00000548247 SRP68Q9UHB9 627 aaKnown RBP18.28■□□□□ 0.52
RACGAP1-211ENST00000548247 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
RACGAP1-211ENST00000548247 ERVV-2B6SEH9 535 aa18.27■□□□□ 0.52
RACGAP1-211ENST00000548247 CHRNA5P30532 468 aa18.27■□□□□ 0.52
RACGAP1-211ENST00000548247 PRELPP51888 382 aa18.27■□□□□ 0.52
RACGAP1-211ENST00000548247 DDR1Q08345 913 aa18.27■□□□□ 0.52
RACGAP1-211ENST00000548247 POLKQ9UBT6 870 aa18.27■□□□□ 0.52
RACGAP1-211ENST00000548247 EIF4A2Q14240 407 aaKnown RBP18.26■□□□□ 0.51
RACGAP1-211ENST00000548247 FKBP8Q14318 412 aa18.26■□□□□ 0.51
RACGAP1-211ENST00000548247 SMC1BQ8NDV3 1235 aa18.25■□□□□ 0.51
RACGAP1-211ENST00000548247 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
RACGAP1-211ENST00000548247 KDM6AO15550 1401 aaPredicted RBP18.23■□□□□ 0.51
RACGAP1-211ENST00000548247 PTCD1O75127 700 aaKnown RBP18.23■□□□□ 0.51
RACGAP1-211ENST00000548247 CRKLP46109 303 aaKnown RBP18.23■□□□□ 0.51
RACGAP1-211ENST00000548247 CDCA8Q53HL2 280 aa18.23■□□□□ 0.51
RACGAP1-211ENST00000548247 RASSF7Q02833 373 aa18.22■□□□□ 0.51
RACGAP1-211ENST00000548247 POLRMTO00411 1230 aaKnown RBP18.21■□□□□ 0.51
RACGAP1-211ENST00000548247 HSPA1AP0DMV8 641 aaKnown RBP18.21■□□□□ 0.51
RACGAP1-211ENST00000548247 HSPA1BP0DMV9 641 aaKnown RBP18.21■□□□□ 0.51
RACGAP1-211ENST00000548247 CABP4P57796 275 aa18.21■□□□□ 0.51
RACGAP1-211ENST00000548247 ADAMTS7Q9UKP4 1686 aa18.2■□□□□ 0.5
RACGAP1-211ENST00000548247 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
RACGAP1-211ENST00000548247 TM4SF1P30408 202 aa18.2■□□□□ 0.5
RACGAP1-211ENST00000548247 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
RACGAP1-211ENST00000548247 TNNT2P45379 298 aaPredicted RBP18.19■□□□□ 0.5
RACGAP1-211ENST00000548247 TJP1Q07157 1748 aa18.19■□□□□ 0.5
RACGAP1-211ENST00000548247 PLEKHO1Q53GL0 409 aaPredicted RBP18.19■□□□□ 0.5
RACGAP1-211ENST00000548247 ZNF530Q6P9A1 599 aaPredicted RBP18.19■□□□□ 0.5
RACGAP1-211ENST00000548247 INTS5Q6P9B9 1019 aaKnown RBP18.18■□□□□ 0.5
RACGAP1-211ENST00000548247 NFATC2IPQ8NCF5 419 aa18.18■□□□□ 0.5
RACGAP1-211ENST00000548247 GLTPD2A6NH11 291 aa18.17■□□□□ 0.5
RACGAP1-211ENST00000548247 VEGFAP15692 232 aaPredicted RBP18.17■□□□□ 0.5
RACGAP1-211ENST00000548247 ZC3H4Q9UPT8 1303 aaKnown RBP18.17■□□□□ 0.5
RACGAP1-211ENST00000548247 MTHFSP49914 203 aa18.16■□□□□ 0.5
RACGAP1-211ENST00000548247 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
RACGAP1-211ENST00000548247 AFDNP55196 1824 aaKnown RBP18.15■□□□□ 0.5
RACGAP1-211ENST00000548247 LMNB1P20700 586 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms