RNA–Protein interactions for RNA: ENST00000548215.1

LINC02403-201, Transcript of long intergenic non-protein coding RNA 2403, humanhuman

TSL 3 BASIC

Gene LINC02403, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02403-201ENST00000548215 SMC1BQ8NDV3 1235 aa13.44□□□□□ -0.26
LINC02403-201ENST00000548215 PLEKHG2Q9H7P9 1386 aa13.44□□□□□ -0.26
LINC02403-201ENST00000548215 SLC34A2O95436 690 aa13.43□□□□□ -0.26
LINC02403-201ENST00000548215 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
LINC02403-201ENST00000548215 CCDC87Q9NVE4 849 aa13.43□□□□□ -0.26
LINC02403-201ENST00000548215 ASAP1Q9ULH1 1129 aa13.43□□□□□ -0.26
LINC02403-201ENST00000548215 C10orf71Q711Q0 1435 aa13.42□□□□□ -0.26
LINC02403-201ENST00000548215 MAP2P11137 1827 aaKnown RBP13.42□□□□□ -0.26
LINC02403-201ENST00000548215 TRAPPC3LQ5T215 181 aa13.42□□□□□ -0.26
LINC02403-201ENST00000548215 NLGN1Q8N2Q7 840 aa13.42□□□□□ -0.26
LINC02403-201ENST00000548215 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
LINC02403-201ENST00000548215 HSP90AB2PQ58FF8 381 aa13.41□□□□□ -0.26
LINC02403-201ENST00000548215 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
LINC02403-201ENST00000548215 SMG6Q86US8 1419 aaKnown RBP13.4□□□□□ -0.26
LINC02403-201ENST00000548215 NEUROD1Q13562 356 aa13.4□□□□□ -0.26
LINC02403-201ENST00000548215 TMOD3Q9NYL9 352 aa13.4□□□□□ -0.26
LINC02403-201ENST00000548215 PIM2Q9P1W9 311 aa13.4□□□□□ -0.26
LINC02403-201ENST00000548215 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.26
LINC02403-201ENST00000548215 PARP3Q9Y6F1 533 aa13.4□□□□□ -0.26
LINC02403-201ENST00000548215 RTL1A6NKG5 1358 aa13.4□□□□□ -0.26
LINC02403-201ENST00000548215 BRCA1P38398 1863 aaKnown RBP13.4□□□□□ -0.26
LINC02403-201ENST00000548215 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
LINC02403-201ENST00000548215 ARHGEF1Q92888 912 aaKnown RBP13.39□□□□□ -0.27
LINC02403-201ENST00000548215 DCAF5Q96JK2 942 aa13.39□□□□□ -0.27
LINC02403-201ENST00000548215 GYS1P13807 737 aa13.38□□□□□ -0.27
LINC02403-201ENST00000548215 NKX1-1Q15270 411 aaPredicted RBP13.38□□□□□ -0.27
LINC02403-201ENST00000548215 CARD11Q9BXL7 1154 aa13.38□□□□□ -0.27
LINC02403-201ENST00000548215 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
LINC02403-201ENST00000548215 ATG3Q9NT62 314 aa13.38□□□□□ -0.27
LINC02403-201ENST00000548215 ARFGEF1Q9Y6D6 1849 aa13.38□□□□□ -0.27
LINC02403-201ENST00000548215 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
LINC02403-201ENST00000548215 C4AP0C0L4 1744 aa13.37□□□□□ -0.27
LINC02403-201ENST00000548215 RFC4P35249 363 aa13.37□□□□□ -0.27
LINC02403-201ENST00000548215 SBF1O95248 1867 aa13.36□□□□□ -0.27
LINC02403-201ENST00000548215 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
LINC02403-201ENST00000548215 CHRNA5P30532 468 aa13.36□□□□□ -0.27
LINC02403-201ENST00000548215 RASSF7Q02833 373 aa13.36□□□□□ -0.27
LINC02403-201ENST00000548215 INSRP06213 1382 aa13.35□□□□□ -0.27
LINC02403-201ENST00000548215 FYB1O15117 783 aa13.35□□□□□ -0.27
LINC02403-201ENST00000548215 SLC4A9Q96Q91 983 aa13.35□□□□□ -0.27
LINC02403-201ENST00000548215 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
LINC02403-201ENST00000548215 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
LINC02403-201ENST00000548215 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
LINC02403-201ENST00000548215 GLTPD2A6NH11 291 aa13.33□□□□□ -0.28
LINC02403-201ENST00000548215 FOXN1O15353 648 aa13.33□□□□□ -0.28
LINC02403-201ENST00000548215 ADRA2BP18089 450 aa13.33□□□□□ -0.28
LINC02403-201ENST00000548215 RC3H1Q5TC82 1133 aaKnown RBP13.33□□□□□ -0.28
LINC02403-201ENST00000548215 SRP68Q9UHB9 627 aaKnown RBP13.33□□□□□ -0.28
LINC02403-201ENST00000548215 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
LINC02403-201ENST00000548215 FLT4P35916 1363 aa13.32□□□□□ -0.28
LINC02403-201ENST00000548215 RPS6KA4O75676 772 aa13.32□□□□□ -0.28
LINC02403-201ENST00000548215 DDR1Q08345 913 aa13.32□□□□□ -0.28
LINC02403-201ENST00000548215 PHKG2P15735 406 aa13.31□□□□□ -0.28
LINC02403-201ENST00000548215 FKBP8Q14318 412 aa13.31□□□□□ -0.28
LINC02403-201ENST00000548215 POTECB2RU33 542 aa13.3□□□□□ -0.28
LINC02403-201ENST00000548215 PPM1GO15355 546 aaPredicted RBP13.3□□□□□ -0.28
LINC02403-201ENST00000548215 LMNB1P20700 586 aa13.3□□□□□ -0.28
LINC02403-201ENST00000548215 IFNL2Q8IZJ0 200 aa13.3□□□□□ -0.28
LINC02403-201ENST00000548215 EMILIN1Q9Y6C2 1016 aa13.3□□□□□ -0.28
LINC02403-201ENST00000548215 KDRP35968 1356 aa13.3□□□□□ -0.28
LINC02403-201ENST00000548215 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
LINC02403-201ENST00000548215 PRDM10Q9NQV6 1147 aa13.29□□□□□ -0.28
LINC02403-201ENST00000548215 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
LINC02403-201ENST00000548215 ZC3H4Q9UPT8 1303 aaKnown RBP13.29□□□□□ -0.28
LINC02403-201ENST00000548215 MYH14Q7Z406 1995 aaKnown RBP13.29□□□□□ -0.28
LINC02403-201ENST00000548215 TESK2Q96S53 571 aa13.28□□□□□ -0.28
LINC02403-201ENST00000548215 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
LINC02403-201ENST00000548215 EYA1Q99502 592 aa13.27□□□□□ -0.29
LINC02403-201ENST00000548215 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC02403-201ENST00000548215 KDM6AO15550 1401 aaPredicted RBP13.27□□□□□ -0.29
LINC02403-201ENST00000548215 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
LINC02403-201ENST00000548215 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
LINC02403-201ENST00000548215 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
LINC02403-201ENST00000548215 USP42Q9H9J4 1324 aaKnown RBP13.26□□□□□ -0.29
LINC02403-201ENST00000548215 COL5A3P25940 1745 aaPredicted RBP13.25□□□□□ -0.29
LINC02403-201ENST00000548215 NCAPD2Q15021 1401 aa13.25□□□□□ -0.29
LINC02403-201ENST00000548215 KIF24Q5T7B8 1368 aa13.25□□□□□ -0.29
LINC02403-201ENST00000548215 TONSLQ96HA7 1378 aa13.25□□□□□ -0.29
LINC02403-201ENST00000548215 PTCD1O75127 700 aaKnown RBP13.25□□□□□ -0.29
LINC02403-201ENST00000548215 TM4SF1P30408 202 aa13.25□□□□□ -0.29
LINC02403-201ENST00000548215 CRKLP46109 303 aaKnown RBP13.25□□□□□ -0.29
LINC02403-201ENST00000548215 CTCFP49711 727 aaPredicted RBP13.25□□□□□ -0.29
LINC02403-201ENST00000548215 AIDAQ96BJ3 306 aa13.25□□□□□ -0.29
LINC02403-201ENST00000548215 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
LINC02403-201ENST00000548215 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
LINC02403-201ENST00000548215 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
LINC02403-201ENST00000548215 LBX1P52954 281 aa13.24□□□□□ -0.29
LINC02403-201ENST00000548215 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
LINC02403-201ENST00000548215 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
LINC02403-201ENST00000548215 PCDH10Q9P2E7 1040 aa13.24□□□□□ -0.29
LINC02403-201ENST00000548215 CNTNAP1P78357 1384 aa13.23□□□□□ -0.29
LINC02403-201ENST00000548215 NFKBIEO00221 500 aa13.23□□□□□ -0.29
LINC02403-201ENST00000548215 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
LINC02403-201ENST00000548215 ABHD8Q96I13 439 aa13.23□□□□□ -0.29
LINC02403-201ENST00000548215 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
LINC02403-201ENST00000548215 ZNF831Q5JPB2 1677 aa13.22□□□□□ -0.29
LINC02403-201ENST00000548215 ZPR1O75312 459 aa13.22□□□□□ -0.29
LINC02403-201ENST00000548215 VEGFBP49765 207 aa13.22□□□□□ -0.29
LINC02403-201ENST00000548215 CABP4P57796 275 aa13.22□□□□□ -0.29
LINC02403-201ENST00000548215 USPL1Q5W0Q7 1092 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms