RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 LMOD1P29536 600 aaPredicted RBP7.69□□□□□ -1.18
CBX5-203ENST00000547872 PTGIRP43119 386 aa7.69□□□□□ -1.18
CBX5-203ENST00000547872 KIFC2Q96AC6 838 aa7.69□□□□□ -1.18
CBX5-203ENST00000547872 ZNF395Q9H8N7 513 aaPredicted RBP7.69□□□□□ -1.18
CBX5-203ENST00000547872 SUPT5HO00267 1087 aaKnown RBP7.68□□□□□ -1.18
CBX5-203ENST00000547872 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
CBX5-203ENST00000547872 ZFP42Q96MM3 310 aa7.68□□□□□ -1.18
CBX5-203ENST00000547872 GMPR2Q9P2T1 348 aaKnown RBP7.68□□□□□ -1.18
CBX5-203ENST00000547872 CEP170Q5SW79 1584 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 HECW2Q9P2P5 1572 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 WDR97A6NE52 1622 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 MEN1O00255 615 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 SPINT1O43278 529 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 GNRH1P01148 92 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 GTF2IP78347 998 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 PSME1Q06323 249 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 CCDC82Q8N4S0 544 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 ARHGEF10LQ9HCE6 1279 aa7.67□□□□□ -1.18
CBX5-203ENST00000547872 POLMQ9NP87 494 aaPredicted RBP7.67□□□□□ -1.18
CBX5-203ENST00000547872 C11orf95C9JLR9 678 aaPredicted RBP7.66□□□□□ -1.18
CBX5-203ENST00000547872 ATP1A2P50993 1020 aa7.66□□□□□ -1.18
CBX5-203ENST00000547872 FAM69CQ0P6D2 419 aa7.66□□□□□ -1.18
CBX5-203ENST00000547872 NLRP3Q96P20 1036 aa7.66□□□□□ -1.18
CBX5-203ENST00000547872 INSM2Q96T92 566 aaPredicted RBP7.66□□□□□ -1.18
CBX5-203ENST00000547872 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
CBX5-203ENST00000547872 MKRN1Q9UHC7 482 aaKnown RBP7.66□□□□□ -1.18
CBX5-203ENST00000547872 A0A1W2PRU2 124 aa7.65□□□□□ -1.18
CBX5-203ENST00000547872 RFX1P22670 979 aa7.65□□□□□ -1.18
CBX5-203ENST00000547872 ESCO1Q5FWF5 840 aa7.65□□□□□ -1.18
CBX5-203ENST00000547872 CFAP70Q5T0N1 1121 aa7.65□□□□□ -1.18
CBX5-203ENST00000547872 KDF1Q8NAX2 398 aaPredicted RBP7.65□□□□□ -1.18
CBX5-203ENST00000547872 TRIM47Q96LD4 638 aa7.65□□□□□ -1.18
CBX5-203ENST00000547872 TTLL8A6PVC2 850 aa7.64□□□□□ -1.19
CBX5-203ENST00000547872 ZNF787Q6DD87 383 aa7.64□□□□□ -1.19
CBX5-203ENST00000547872 C1orf115Q9H7X2 142 aa7.64□□□□□ -1.19
CBX5-203ENST00000547872 VRTNQ9H8Y1 702 aa7.64□□□□□ -1.19
CBX5-203ENST00000547872 CUX1P39880 1505 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 ADGRL1O94910 1474 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 MAN1A2O60476 641 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 RASA1P20936 1047 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 CTSOP43234 321 aaPredicted RBP7.63□□□□□ -1.19
CBX5-203ENST00000547872 GDF10P55107 478 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 CLN3Q13286 438 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 OGFOD1Q8N543 542 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 DNAAF2Q9NVR5 837 aaKnown RBP7.63□□□□□ -1.19
CBX5-203ENST00000547872 RBM19Q9Y4C8 960 aaKnown RBP7.63□□□□□ -1.19
CBX5-203ENST00000547872 PCDHGA11Q9Y5H2 935 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 DIP2BQ9P265 1576 aa7.63□□□□□ -1.19
CBX5-203ENST00000547872 SOS2Q07890 1332 aaPredicted RBP7.62□□□□□ -1.19
CBX5-203ENST00000547872 POTECB2RU33 542 aa7.62□□□□□ -1.19
CBX5-203ENST00000547872 LARP1Q6PKG0 1096 aaKnown RBP7.62□□□□□ -1.19
CBX5-203ENST00000547872 CNKSR1Q969H4 720 aa7.62□□□□□ -1.19
CBX5-203ENST00000547872 ETNK1Q9HBU6 452 aa7.62□□□□□ -1.19
CBX5-203ENST00000547872 GRIN2AQ12879 1464 aa7.62□□□□□ -1.19
CBX5-203ENST00000547872 TTBK1Q5TCY1 1321 aaPredicted RBP7.61□□□□□ -1.19
CBX5-203ENST00000547872 FIGNL2A6NMB9 653 aa7.61□□□□□ -1.19
CBX5-203ENST00000547872 STAU1O95793 577 aaKnown RBP7.61□□□□□ -1.19
CBX5-203ENST00000547872 IL2RAP01589 272 aa7.61□□□□□ -1.19
CBX5-203ENST00000547872 SNRPBP14678 240 aaKnown RBP7.61□□□□□ -1.19
CBX5-203ENST00000547872 GTF2E1P29083 439 aaPredicted RBP7.61□□□□□ -1.19
CBX5-203ENST00000547872 CLDN10P78369 228 aa7.61□□□□□ -1.19
CBX5-203ENST00000547872 SLC27A3Q5K4L6 730 aa7.61□□□□□ -1.19
CBX5-203ENST00000547872 FOXD4L5Q5VV16 416 aaPredicted RBP7.61□□□□□ -1.19
CBX5-203ENST00000547872 LARGE2Q8N3Y3 721 aa7.61□□□□□ -1.19
CBX5-203ENST00000547872 TPCN2Q8NHX9 752 aa7.61□□□□□ -1.19
CBX5-203ENST00000547872 ZNF594Q96JF6 807 aaPredicted RBP7.61□□□□□ -1.19
CBX5-203ENST00000547872 ARID3AQ99856 593 aa7.61□□□□□ -1.19
CBX5-203ENST00000547872 ESYT1Q9BSJ8 1104 aa7.61□□□□□ -1.19
CBX5-203ENST00000547872 ABCA5Q8WWZ7 1642 aa7.6□□□□□ -1.19
CBX5-203ENST00000547872 ADAMTS12P58397 1594 aa7.6□□□□□ -1.19
CBX5-203ENST00000547872 INHAP05111 366 aa7.6□□□□□ -1.19
CBX5-203ENST00000547872 GPC1P35052 558 aa7.6□□□□□ -1.19
CBX5-203ENST00000547872 RNF144AP50876 292 aaPredicted RBP7.6□□□□□ -1.19
CBX5-203ENST00000547872 SCNN1DP51172 638 aa7.6□□□□□ -1.19
CBX5-203ENST00000547872 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.6□□□□□ -1.193e-6■□□□□ 9.1
CBX5-203ENST00000547872 CDCA8Q53HL2 280 aa7.6□□□□□ -1.19
CBX5-203ENST00000547872 KANK4Q5T7N3 995 aaPredicted RBP7.6□□□□□ -1.19
CBX5-203ENST00000547872 CCDC102BQ68D86 513 aa7.6□□□□□ -1.19
CBX5-203ENST00000547872 RNF217Q8TC41 542 aa7.6□□□□□ -1.19
CBX5-203ENST00000547872 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.59□□□□□ -1.19
CBX5-203ENST00000547872 FAM196BA6NMK8 535 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 SOBPA7XYQ1 873 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L15C9J2P7 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L10C9JJH3 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L13C9JLJ4 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L12C9JPN9 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L11C9JVI0 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L21D6R901 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L18D6R9N7 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L22D6RA61 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L17D6RBQ6 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L19D6RCP7 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L20D6RJB6 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 WASLO00401 505 aaPredicted RBP7.59□□□□□ -1.19
CBX5-203ENST00000547872 USP17L24Q0WX57 530 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 TLR1Q15399 786 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 XAGE2Q96GT9 111 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 SERTAD1Q9UHV2 236 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 DNMT3LQ9UJW3 386 aa7.59□□□□□ -1.19
CBX5-203ENST00000547872 KIAA1024Q9UPX6 916 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms