RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 SMIM5Q71RC9 77 aa18.94■□□□□ 0.62
CCDC59-202ENST00000547758 GGNBP2Q9H3C7 697 aa18.94■□□□□ 0.62
CCDC59-202ENST00000547758 FLT4P35916 1363 aa18.93■□□□□ 0.62
CCDC59-202ENST00000547758 FYB1O15117 783 aa18.93■□□□□ 0.62
CCDC59-202ENST00000547758 SSFA2P28290 1259 aa18.93■□□□□ 0.62
CCDC59-202ENST00000547758 HSP90AB2PQ58FF8 381 aa18.93■□□□□ 0.62
CCDC59-202ENST00000547758 ST20-MTHFSA0A0A6YYL1 179 aa18.92■□□□□ 0.62
CCDC59-202ENST00000547758 KIF24Q5T7B8 1368 aa18.92■□□□□ 0.62
CCDC59-202ENST00000547758 BRCA1P38398 1863 aaKnown RBP18.91■□□□□ 0.62
CCDC59-202ENST00000547758 APLP1P51693 650 aa18.91■□□□□ 0.62
CCDC59-202ENST00000547758 PIGBQ92521 554 aa18.91■□□□□ 0.62
CCDC59-202ENST00000547758 SLC24A1O60721 1099 aa18.9■□□□□ 0.62
CCDC59-202ENST00000547758 LINC00116Q8NCU8 138 aa18.9■□□□□ 0.62
CCDC59-202ENST00000547758 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
CCDC59-202ENST00000547758 PXDNLA1KZ92 1463 aa18.9■□□□□ 0.62
CCDC59-202ENST00000547758 WDR90Q96KV7 1748 aa18.89■□□□□ 0.61
CCDC59-202ENST00000547758 ANKRD26Q9UPS8 1709 aa18.89■□□□□ 0.61
CCDC59-202ENST00000547758 LOC102724428A0A0B4J2F2 783 aa18.89■□□□□ 0.61
CCDC59-202ENST00000547758 SIK1P57059 783 aa18.89■□□□□ 0.61
CCDC59-202ENST00000547758 NCAPD2Q15021 1401 aa18.88■□□□□ 0.61
CCDC59-202ENST00000547758 GNPATO15228 680 aa18.87■□□□□ 0.61
CCDC59-202ENST00000547758 NKX1-1Q15270 411 aaPredicted RBP18.87■□□□□ 0.61
CCDC59-202ENST00000547758 ARFGEF1Q9Y6D6 1849 aa18.86■□□□□ 0.61
CCDC59-202ENST00000547758 TOMM70O94826 608 aa18.86■□□□□ 0.61
CCDC59-202ENST00000547758 MMP10P09238 476 aa18.86■□□□□ 0.61
CCDC59-202ENST00000547758 ITPK1Q13572 414 aa18.85■□□□□ 0.61
CCDC59-202ENST00000547758 DNAJC5GQ8N7S2 189 aa18.85■□□□□ 0.61
CCDC59-202ENST00000547758 TMOD3Q9NYL9 352 aa18.85■□□□□ 0.61
CCDC59-202ENST00000547758 C4AP0C0L4 1744 aa18.84■□□□□ 0.61
CCDC59-202ENST00000547758 COL5A3P25940 1745 aaPredicted RBP18.84■□□□□ 0.61
CCDC59-202ENST00000547758 SPG7Q9UQ90 795 aa18.84■□□□□ 0.61
CCDC59-202ENST00000547758 ZNF831Q5JPB2 1677 aa18.84■□□□□ 0.61
CCDC59-202ENST00000547758 C10orf71Q711Q0 1435 aa18.83■□□□□ 0.61
CCDC59-202ENST00000547758 ATP6V1AP38606 617 aa18.83■□□□□ 0.6
CCDC59-202ENST00000547758 TGFB2P61812 414 aa18.83■□□□□ 0.6
CCDC59-202ENST00000547758 ASAP1Q9ULH1 1129 aa18.83■□□□□ 0.6
CCDC59-202ENST00000547758 BCS1LQ9Y276 419 aa18.83■□□□□ 0.6
CCDC59-202ENST00000547758 EMILIN1Q9Y6C2 1016 aa18.83■□□□□ 0.6
CCDC59-202ENST00000547758 TMF1P82094 1093 aa18.81■□□□□ 0.6
CCDC59-202ENST00000547758 NMRK2Q9NPI5 230 aa18.81■□□□□ 0.6
CCDC59-202ENST00000547758 A0A0G2JLW4 131 aa18.8■□□□□ 0.6
CCDC59-202ENST00000547758 ARHGAP27Q6ZUM4 889 aa18.8■□□□□ 0.6
CCDC59-202ENST00000547758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.61e-6■■■■□ 24.5
CCDC59-202ENST00000547758 KDRP35968 1356 aa18.8■□□□□ 0.6
CCDC59-202ENST00000547758 MYH14Q7Z406 1995 aaKnown RBP18.79■□□□□ 0.6
CCDC59-202ENST00000547758 PCNTO95613 3336 aa18.79■□□□□ 0.6
CCDC59-202ENST00000547758 SBF1O95248 1867 aa18.78■□□□□ 0.6
CCDC59-202ENST00000547758 ATXN8OSP0DMR3 200 aa18.78■□□□□ 0.6
CCDC59-202ENST00000547758 PHKG2P15735 406 aa18.78■□□□□ 0.6
CCDC59-202ENST00000547758 TRAPPC3LQ5T215 181 aa18.78■□□□□ 0.6
CCDC59-202ENST00000547758 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
CCDC59-202ENST00000547758 NLGN1Q8N2Q7 840 aa18.78■□□□□ 0.6
CCDC59-202ENST00000547758 ATG3Q9NT62 314 aa18.78■□□□□ 0.6
CCDC59-202ENST00000547758 RTCBQ9Y3I0 505 aaKnown RBP18.78■□□□□ 0.6
CCDC59-202ENST00000547758 PPM1GO15355 546 aaPredicted RBP18.77■□□□□ 0.6
CCDC59-202ENST00000547758 FCHSD2O94868 740 aa18.77■□□□□ 0.6
CCDC59-202ENST00000547758 RBM46Q8TBY0 533 aaKnown RBP18.77■□□□□ 0.6
CCDC59-202ENST00000547758 CCDC87Q9NVE4 849 aa18.77■□□□□ 0.6
CCDC59-202ENST00000547758 PLEKHG2Q9H7P9 1386 aa18.77■□□□□ 0.6
CCDC59-202ENST00000547758 TNRC6CQ9HCJ0 1690 aaKnown RBP18.76■□□□□ 0.59
CCDC59-202ENST00000547758 DPEP1P16444 411 aa18.76■□□□□ 0.59
CCDC59-202ENST00000547758 EYA1Q99502 592 aa18.76■□□□□ 0.59
CCDC59-202ENST00000547758 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
CCDC59-202ENST00000547758 C16orf71Q8IYS4 520 aaPredicted RBP18.75■□□□□ 0.59
CCDC59-202ENST00000547758 C9orf131Q5VYM1 1079 aa18.74■□□□□ 0.59
CCDC59-202ENST00000547758 ARHGEF1Q92888 912 aaKnown RBP18.74■□□□□ 0.59
CCDC59-202ENST00000547758 KLRG1Q96E93 195 aa18.74■□□□□ 0.59
CCDC59-202ENST00000547758 CARD14Q9BXL6 1004 aa18.74■□□□□ 0.59
CCDC59-202ENST00000547758 GYS1P13807 737 aa18.73■□□□□ 0.59
CCDC59-202ENST00000547758 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
CCDC59-202ENST00000547758 SLC4A9Q96Q91 983 aa18.73■□□□□ 0.59
CCDC59-202ENST00000547758 PARP3Q9Y6F1 533 aa18.73■□□□□ 0.59
CCDC59-202ENST00000547758 KCPQ6ZWJ8 1503 aa18.73■□□□□ 0.59
CCDC59-202ENST00000547758 CNTNAP4Q9C0A0 1308 aa18.73■□□□□ 0.59
CCDC59-202ENST00000547758 RFC4P35249 363 aa18.72■□□□□ 0.59
CCDC59-202ENST00000547758 HTRA3P83110 453 aa18.72■□□□□ 0.59
CCDC59-202ENST00000547758 FSTL1Q12841 308 aa18.72■□□□□ 0.59
CCDC59-202ENST00000547758 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
CCDC59-202ENST00000547758 KCNA3P22001 575 aa18.71■□□□□ 0.59
CCDC59-202ENST00000547758 JMYQ8N9B5 988 aa18.71■□□□□ 0.59
CCDC59-202ENST00000547758 RPS6KA4O75676 772 aa18.7■□□□□ 0.58
CCDC59-202ENST00000547758 COL13A1Q5TAT6 717 aaPredicted RBP18.7■□□□□ 0.58
CCDC59-202ENST00000547758 KDM2BQ8NHM5 1336 aa18.7■□□□□ 0.58
CCDC59-202ENST00000547758 ERVV-2B6SEH9 535 aa18.69■□□□□ 0.58
CCDC59-202ENST00000547758 DCAF5Q96JK2 942 aa18.69■□□□□ 0.58
CCDC59-202ENST00000547758 PIM2Q9P1W9 311 aa18.69■□□□□ 0.58
CCDC59-202ENST00000547758 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
CCDC59-202ENST00000547758 TJP1Q07157 1748 aa18.68■□□□□ 0.58
CCDC59-202ENST00000547758 CCDC88AQ3V6T2 1871 aa18.67■□□□□ 0.58
CCDC59-202ENST00000547758 DALRD3Q5D0E6 543 aaKnown RBP18.67■□□□□ 0.58
CCDC59-202ENST00000547758 RNF181Q9P0P0 153 aa18.67■□□□□ 0.58
CCDC59-202ENST00000547758 POLKQ9UBT6 870 aa18.67■□□□□ 0.58
CCDC59-202ENST00000547758 HSP90AB1P08238 724 aaKnown RBP18.66■□□□□ 0.58
CCDC59-202ENST00000547758 EIF4A2Q14240 407 aaKnown RBP18.66■□□□□ 0.58
CCDC59-202ENST00000547758 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
CCDC59-202ENST00000547758 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
CCDC59-202ENST00000547758 RRAGCQ9HB90 399 aa18.65■□□□□ 0.58
CCDC59-202ENST00000547758 ADAMTS7Q9UKP4 1686 aa18.65■□□□□ 0.58
CCDC59-202ENST00000547758 DLEC1Q9Y238 1755 aa18.64■□□□□ 0.57
CCDC59-202ENST00000547758 DDR1Q08345 913 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms