RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 CYP27B1O15528 508 aa11.46□□□□□ -0.57
PTCH1-214ENST00000547615 HSP90AB1P08238 724 aaKnown RBP11.46□□□□□ -0.57
PTCH1-214ENST00000547615 ATP6V1AP38606 617 aa11.46□□□□□ -0.57
PTCH1-214ENST00000547615 USHBP1Q8N6Y0 703 aa11.46□□□□□ -0.57
PTCH1-214ENST00000547615 C4AP0C0L4 1744 aa11.46□□□□□ -0.58
PTCH1-214ENST00000547615 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
PTCH1-214ENST00000547615 MMP10P09238 476 aa11.45□□□□□ -0.58
PTCH1-214ENST00000547615 HSP90AB2PQ58FF8 381 aa11.45□□□□□ -0.58
PTCH1-214ENST00000547615 TRAPPC3LQ5T215 181 aa11.45□□□□□ -0.58
PTCH1-214ENST00000547615 PIGBQ92521 554 aa11.45□□□□□ -0.58
PTCH1-214ENST00000547615 GGNBP2Q9H3C7 697 aa11.45□□□□□ -0.58
PTCH1-214ENST00000547615 BCS1LQ9Y276 419 aa11.45□□□□□ -0.58
PTCH1-214ENST00000547615 KIAA1551Q9HCM1 1747 aa11.45□□□□□ -0.58
PTCH1-214ENST00000547615 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
PTCH1-214ENST00000547615 RC3H1Q5TC82 1133 aaKnown RBP11.44□□□□□ -0.58
PTCH1-214ENST00000547615 PARP3Q9Y6F1 533 aa11.44□□□□□ -0.58
PTCH1-214ENST00000547615 WASHC2AQ641Q2 1341 aa11.43□□□□□ -0.58
PTCH1-214ENST00000547615 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
PTCH1-214ENST00000547615 LINC00116Q8NCU8 138 aa11.43□□□□□ -0.58
PTCH1-214ENST00000547615 COL5A3P25940 1745 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-214ENST00000547615 KDRP35968 1356 aa11.42□□□□□ -0.58
PTCH1-214ENST00000547615 N4BP2Q86UW6 1770 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-214ENST00000547615 ERVV-2B6SEH9 535 aa11.42□□□□□ -0.58
PTCH1-214ENST00000547615 RFC4P35249 363 aa11.42□□□□□ -0.58
PTCH1-214ENST00000547615 ARHGAP27Q6ZUM4 889 aa11.42□□□□□ -0.58
PTCH1-214ENST00000547615 JMYQ8N9B5 988 aa11.42□□□□□ -0.58
PTCH1-214ENST00000547615 KLRG1Q96E93 195 aa11.42□□□□□ -0.58
PTCH1-214ENST00000547615 PIM2Q9P1W9 311 aa11.42□□□□□ -0.58
PTCH1-214ENST00000547615 FCHSD2O94868 740 aa11.41□□□□□ -0.58
PTCH1-214ENST00000547615 PHKG2P15735 406 aa11.41□□□□□ -0.58
PTCH1-214ENST00000547615 DNAJC5GQ8N7S2 189 aa11.41□□□□□ -0.58
PTCH1-214ENST00000547615 FBLN1P23142 703 aa11.4□□□□□ -0.58
PTCH1-214ENST00000547615 SMC1BQ8NDV3 1235 aa11.4□□□□□ -0.58
PTCH1-214ENST00000547615 DCAF5Q96JK2 942 aa11.4□□□□□ -0.58
PTCH1-214ENST00000547615 RPS6KA4O75676 772 aa11.39□□□□□ -0.59
PTCH1-214ENST00000547615 AMOTQ4VCS5 1084 aa11.39□□□□□ -0.59
PTCH1-214ENST00000547615 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
PTCH1-214ENST00000547615 ITPK1Q13572 414 aa11.38□□□□□ -0.59
PTCH1-214ENST00000547615 AMIGO3Q86WK7 504 aa11.38□□□□□ -0.59
PTCH1-214ENST00000547615 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
PTCH1-214ENST00000547615 ASAP1Q9ULH1 1129 aa11.38□□□□□ -0.59
PTCH1-214ENST00000547615 EMILIN1Q9Y6C2 1016 aa11.38□□□□□ -0.59
PTCH1-214ENST00000547615 A0A0G2JLW4 131 aa11.37□□□□□ -0.59
PTCH1-214ENST00000547615 PPM1GO15355 546 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-214ENST00000547615 GYS1P13807 737 aa11.37□□□□□ -0.59
PTCH1-214ENST00000547615 DPEP1P16444 411 aa11.37□□□□□ -0.59
PTCH1-214ENST00000547615 C9orf131Q5VYM1 1079 aa11.37□□□□□ -0.59
PTCH1-214ENST00000547615 NMRK2Q9NPI5 230 aa11.37□□□□□ -0.59
PTCH1-214ENST00000547615 WWC3Q9ULE0 1092 aa11.37□□□□□ -0.59
PTCH1-214ENST00000547615 PLEKHO1Q53GL0 409 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-214ENST00000547615 TNS4Q8IZW8 715 aa11.36□□□□□ -0.59
PTCH1-214ENST00000547615 ARHGEF1Q92888 912 aaKnown RBP11.36□□□□□ -0.59
PTCH1-214ENST00000547615 EYA1Q99502 592 aa11.36□□□□□ -0.59
PTCH1-214ENST00000547615 RBM42Q9BTD8 480 aaKnown RBP11.36□□□□□ -0.59
PTCH1-214ENST00000547615 RNF181Q9P0P0 153 aa11.36□□□□□ -0.59
PTCH1-214ENST00000547615 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
PTCH1-214ENST00000547615 PRELPP51888 382 aa11.35□□□□□ -0.59
PTCH1-214ENST00000547615 PDZRN3Q9UPQ7 1066 aa11.35□□□□□ -0.59
PTCH1-214ENST00000547615 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
PTCH1-214ENST00000547615 CABP4P57796 275 aa11.34□□□□□ -0.59
PTCH1-214ENST00000547615 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
PTCH1-214ENST00000547615 DLEC1Q9Y238 1755 aa11.33□□□□□ -0.59
PTCH1-214ENST00000547615 VEGFAP15692 232 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-214ENST00000547615 SBF1O95248 1867 aa11.33□□□□□ -0.6
PTCH1-214ENST00000547615 KDM6AO15550 1401 aaPredicted RBP11.33□□□□□ -0.6
PTCH1-214ENST00000547615 ZPR1O75312 459 aa11.32□□□□□ -0.6
PTCH1-214ENST00000547615 LMNB1P20700 586 aa11.32□□□□□ -0.6
PTCH1-214ENST00000547615 TIAM2Q8IVF5 1701 aa11.32□□□□□ -0.6
PTCH1-214ENST00000547615 KCNA3P22001 575 aa11.31□□□□□ -0.6
PTCH1-214ENST00000547615 DPY19L2Q6NUT2 758 aa11.31□□□□□ -0.6
PTCH1-214ENST00000547615 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
PTCH1-214ENST00000547615 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
PTCH1-214ENST00000547615 TJP1Q07157 1748 aa11.31□□□□□ -0.6
PTCH1-214ENST00000547615 GLTPD2A6NH11 291 aa11.3□□□□□ -0.6
PTCH1-214ENST00000547615 CRKLP46109 303 aaKnown RBP11.3□□□□□ -0.6
PTCH1-214ENST00000547615 MTHFSP49914 203 aa11.3□□□□□ -0.6
PTCH1-214ENST00000547615 EIF4A2Q14240 407 aaKnown RBP11.3□□□□□ -0.6
PTCH1-214ENST00000547615 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-214ENST00000547615 ZNF530Q6P9A1 599 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-214ENST00000547615 CARD14Q9BXL6 1004 aa11.3□□□□□ -0.6
PTCH1-214ENST00000547615 RRAGCQ9HB90 399 aa11.3□□□□□ -0.6
PTCH1-214ENST00000547615 MYH14Q7Z406 1995 aaKnown RBP11.3□□□□□ -0.6
PTCH1-214ENST00000547615 NRXN2Q9P2S2 1712 aa11.29□□□□□ -0.6
PTCH1-214ENST00000547615 SCN11AQ9UI33 1791 aa11.29□□□□□ -0.6
PTCH1-214ENST00000547615 SMIM5Q71RC9 77 aa11.29□□□□□ -0.6
PTCH1-214ENST00000547615 POLRMTO00411 1230 aaKnown RBP11.28□□□□□ -0.6
PTCH1-214ENST00000547615 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
PTCH1-214ENST00000547615 PTCD1O75127 700 aaKnown RBP11.27□□□□□ -0.61
PTCH1-214ENST00000547615 HSPA1AP0DMV8 641 aaKnown RBP11.27□□□□□ -0.61
PTCH1-214ENST00000547615 HSPA1BP0DMV9 641 aaKnown RBP11.27□□□□□ -0.61
PTCH1-214ENST00000547615 TM4SF1P30408 202 aa11.27□□□□□ -0.61
PTCH1-214ENST00000547615 FKBP8Q14318 412 aa11.27□□□□□ -0.61
PTCH1-214ENST00000547615 SOGA3Q5TF21 947 aa11.27□□□□□ -0.61
PTCH1-214ENST00000547615 VSIG10Q8N0Z9 540 aa11.27□□□□□ -0.61
PTCH1-214ENST00000547615 TTLL6Q8N841 843 aa11.27□□□□□ -0.61
PTCH1-214ENST00000547615 NARFQ9UHQ1 456 aa11.27□□□□□ -0.61
PTCH1-214ENST00000547615 COL15A1P39059 1388 aa11.27□□□□□ -0.61
PTCH1-214ENST00000547615 ADAMTS7Q9UKP4 1686 aa11.27□□□□□ -0.61
PTCH1-214ENST00000547615 MRC1P22897 1456 aa11.26□□□□□ -0.61
PTCH1-214ENST00000547615 A0A087WZG4 1122 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms