RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 ACDQ96AP0 544 aa4.54□□□□□ -1.68
CPNE8-205ENST00000547417 NUCKS1Q9H1E3 243 aaKnown RBP4.54□□□□□ -1.68
CPNE8-205ENST00000547417 ARHGEF10LQ9HCE6 1279 aa4.54□□□□□ -1.68
CPNE8-205ENST00000547417 LRRC4BQ9NT99 713 aa4.54□□□□□ -1.68
CPNE8-205ENST00000547417 SOCS7O14512 581 aa4.53□□□□□ -1.68
CPNE8-205ENST00000547417 GNRH1P01148 92 aa4.53□□□□□ -1.68
CPNE8-205ENST00000547417 TIMELESSQ9UNS1 1208 aa4.53□□□□□ -1.68
CPNE8-205ENST00000547417 APBB1O00213 710 aa4.52□□□□□ -1.69
CPNE8-205ENST00000547417 MAP2K3P46734 347 aa4.52□□□□□ -1.69
CPNE8-205ENST00000547417 CNKSR1Q969H4 720 aa4.52□□□□□ -1.69
CPNE8-205ENST00000547417 ESYT1Q9BSJ8 1104 aa4.52□□□□□ -1.69
CPNE8-205ENST00000547417 CFHR5Q9BXR6 569 aa4.52□□□□□ -1.69
CPNE8-205ENST00000547417 RAB6BQ9NRW1 208 aa4.52□□□□□ -1.69
CPNE8-205ENST00000547417 NDUFB9Q9Y6M9 179 aa4.52□□□□□ -1.69
CPNE8-205ENST00000547417 OIP5O43482 229 aa4.51□□□□□ -1.69
CPNE8-205ENST00000547417 MYCP01106 439 aaPredicted RBP4.51□□□□□ -1.69
CPNE8-205ENST00000547417 IL2RAP01589 272 aa4.51□□□□□ -1.69
CPNE8-205ENST00000547417 BAG6P46379 1132 aa4.51□□□□□ -1.69
CPNE8-205ENST00000547417 CENPCQ03188 943 aa4.51□□□□□ -1.69
CPNE8-205ENST00000547417 MTMR14Q8NCE2 650 aa4.51□□□□□ -1.69
CPNE8-205ENST00000547417 ZSCAN10Q96SZ4 725 aaPredicted RBP4.51□□□□□ -1.69
CPNE8-205ENST00000547417 CEP126Q9P2H0 1117 aa4.51□□□□□ -1.69
CPNE8-205ENST00000547417 PHF24Q9UPV7 400 aa4.51□□□□□ -1.69
CPNE8-205ENST00000547417 A0A1B0GTH6 734 aa4.5□□□□□ -1.69
CPNE8-205ENST00000547417 FURINP09958 794 aa4.5□□□□□ -1.69
CPNE8-205ENST00000547417 GTF2E1P29083 439 aaPredicted RBP4.5□□□□□ -1.69
CPNE8-205ENST00000547417 PHKA2P46019 1235 aa4.5□□□□□ -1.69
CPNE8-205ENST00000547417 GNASQ5JWF2 1037 aa4.5□□□□□ -1.69
CPNE8-205ENST00000547417 XAGE2Q96GT9 111 aa4.5□□□□□ -1.69
CPNE8-205ENST00000547417 ARXQ96QS3 562 aa4.5□□□□□ -1.69
CPNE8-205ENST00000547417 OXCT2Q9BYC2 517 aaPredicted RBP4.5□□□□□ -1.69
CPNE8-205ENST00000547417 GPR37L1O60883 481 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 THBS1P07996 1170 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 CSB-PGBD3P0DP91 1061 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 LBRQ14739 615 aaKnown RBP4.49□□□□□ -1.69
CPNE8-205ENST00000547417 ESCO1Q5FWF5 840 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 TMEM214Q6NUQ4 689 aaKnown RBP4.49□□□□□ -1.69
CPNE8-205ENST00000547417 PGBD3Q8N328 593 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 KLRG1Q96E93 195 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 CCDC85AQ96PX6 553 aaPredicted RBP4.49□□□□□ -1.69
CPNE8-205ENST00000547417 CDCA7Q9BWT1 371 aaPredicted RBP4.49□□□□□ -1.69
CPNE8-205ENST00000547417 GPAMQ9HCL2 828 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 SNRKQ9NRH2 765 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 HRH3Q9Y5N1 445 aa4.49□□□□□ -1.69
CPNE8-205ENST00000547417 KRBA1A5PL33 1030 aa4.48□□□□□ -1.69
CPNE8-205ENST00000547417 SNRPNP63162 240 aaKnown RBP4.48□□□□□ -1.69
CPNE8-205ENST00000547417 USP4Q13107 963 aa4.48□□□□□ -1.69
CPNE8-205ENST00000547417 C4orf17Q53FE4 359 aa4.48□□□□□ -1.69
CPNE8-205ENST00000547417 EFHC2Q5JST6 749 aa4.48□□□□□ -1.69
CPNE8-205ENST00000547417 FHDC1Q9C0D6 1143 aaPredicted RBP4.48□□□□□ -1.69
CPNE8-205ENST00000547417 GDF2Q9UK05 429 aaPredicted RBP4.48□□□□□ -1.69
CPNE8-205ENST00000547417 MKL2Q9ULH7 1088 aa4.48□□□□□ -1.69
CPNE8-205ENST00000547417 SHISA8B8ZZ34 492 aa4.47□□□□□ -1.69
CPNE8-205ENST00000547417 MSX1P28360 303 aa4.47□□□□□ -1.69
CPNE8-205ENST00000547417 EIF4G2P78344 907 aaKnown RBP eCLIP4.47□□□□□ -1.69
CPNE8-205ENST00000547417 UBAP2LQ14157 1087 aaKnown RBP4.47□□□□□ -1.69
CPNE8-205ENST00000547417 C1orf229Q6ZS94 237 aaPredicted RBP4.47□□□□□ -1.69
CPNE8-205ENST00000547417 ALYREFQ86V81 257 aaKnown RBP4.47□□□□□ -1.69
CPNE8-205ENST00000547417 GOLGA6L1Q8N7Z2 621 aa4.47□□□□□ -1.69
CPNE8-205ENST00000547417 EDARADDQ8WWZ3 215 aa4.47□□□□□ -1.69
CPNE8-205ENST00000547417 RUBCNLQ9H714 662 aa4.47□□□□□ -1.69
CPNE8-205ENST00000547417 ATXN7L1Q9ULK2 861 aaPredicted RBP4.47□□□□□ -1.69
CPNE8-205ENST00000547417 BMP4P12644 408 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 BRPF1P55201 1214 aaPredicted RBP4.46□□□□□ -1.7
CPNE8-205ENST00000547417 TSGA10IPQ3SY00 556 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 SLFNL1Q499Z3 407 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 PPARGC1BQ86YN6 1023 aaKnown RBP4.46□□□□□ -1.7
CPNE8-205ENST00000547417 PHTF2Q8N3S3 785 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 RHBDD1Q8TEB9 315 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 RRAGCQ9HB90 399 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 PRM3Q9NNZ6 103 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 DOLKQ9UPQ8 538 aa4.46□□□□□ -1.7
CPNE8-205ENST00000547417 C2CD2LO14523 706 aa4.45□□□□□ -1.7
CPNE8-205ENST00000547417 SIRT1Q96EB6 747 aa4.45□□□□□ -1.7
CPNE8-205ENST00000547417 ETNK1Q9HBU6 452 aa4.45□□□□□ -1.7
CPNE8-205ENST00000547417 PIK3R2O00459 728 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 FGFR3P22607 806 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 AMPD1P23109 780 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 TLR1Q15399 786 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 OXLD1Q5BKU9 147 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 FIGNL1Q6PIW4 674 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 SLCO4C1Q6ZQN7 724 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 C14orf37Q86TY3 774 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 RNF135Q8IUD6 432 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 ABHD17AQ96GS6 310 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 CRISPLD1Q9H336 500 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 NDFIP2Q9NV92 336 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 TBC1D2BQ9UPU7 963 aa4.44□□□□□ -1.7
CPNE8-205ENST00000547417 BNIP3LO60238 219 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 STAU1O95793 577 aaKnown RBP4.43□□□□□ -1.7
CPNE8-205ENST00000547417 COL8A1P27658 744 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 CTBSQ01459 385 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 LINC00114Q6XXX2 140 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 TBC1D9Q6ZT07 1266 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 C1orf216Q8TAB5 229 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 KRTAP4-12Q9BQ66 201 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 GGA1Q9UJY5 639 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 PCDHGC4Q9Y5F7 938 aa4.43□□□□□ -1.7
CPNE8-205ENST00000547417 INHAP05111 366 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms