RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 TMOD3Q9NYL9 352 aa22.68■■□□□ 1.22
RBFOX1-207ENST00000547338 ADAMTS7Q9UKP4 1686 aa22.68■■□□□ 1.22
RBFOX1-207ENST00000547338 PNPLA7Q6ZV29 1317 aa22.67■■□□□ 1.22
RBFOX1-207ENST00000547338 ERVV-2B6SEH9 535 aa22.67■■□□□ 1.22
RBFOX1-207ENST00000547338 ZBTB7AO95365 584 aa22.67■■□□□ 1.22
RBFOX1-207ENST00000547338 ATG3Q9NT62 314 aa22.67■■□□□ 1.22
RBFOX1-207ENST00000547338 PTGER2P43116 358 aa22.66■■□□□ 1.22
RBFOX1-207ENST00000547338 SMARCC1Q92922 1105 aaPredicted RBP22.66■■□□□ 1.22
RBFOX1-207ENST00000547338 SPON1Q9HCB6 807 aa22.66■■□□□ 1.22
RBFOX1-207ENST00000547338 HSP90AB1P08238 724 aaKnown RBP22.65■■□□□ 1.22
RBFOX1-207ENST00000547338 MTHFSDQ2M296 383 aaKnown RBP22.65■■□□□ 1.22
RBFOX1-207ENST00000547338 VIRMAQ69YN4 1812 aaKnown RBP22.65■■□□□ 1.22
RBFOX1-207ENST00000547338 C4BP0C0L5 1744 aa22.64■■□□□ 1.22
RBFOX1-207ENST00000547338 U2SURPO15042 1029 aaKnown RBP22.64■■□□□ 1.21
RBFOX1-207ENST00000547338 C1orf141Q5JVX7 400 aa22.63■■□□□ 1.21
RBFOX1-207ENST00000547338 SGIP1Q9BQI5 828 aa22.63■■□□□ 1.21
RBFOX1-207ENST00000547338 COL24A1Q17RW2 1714 aa22.63■■□□□ 1.21
RBFOX1-207ENST00000547338 MRC1P22897 1456 aa22.63■■□□□ 1.21
RBFOX1-207ENST00000547338 AKAP4Q5JQC9 854 aa22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 AMIGO3Q86WK7 504 aa22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 SLC4A9Q96Q91 983 aa22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 LOC102724428A0A0B4J2F2 783 aa22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 SIK1P57059 783 aa22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 ITPK1Q13572 414 aa22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 RSPH6AQ9H0K4 717 aa22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 LGR6Q9HBX8 967 aa22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 ATF5Q9Y2D1 282 aaPredicted RBP22.62■■□□□ 1.21
RBFOX1-207ENST00000547338 NGEFQ8N5V2 710 aa22.61■■□□□ 1.21
RBFOX1-207ENST00000547338 CFAP53Q96M91 514 aa22.61■■□□□ 1.21
RBFOX1-207ENST00000547338 ZNF831Q5JPB2 1677 aa22.61■■□□□ 1.21
RBFOX1-207ENST00000547338 LINC00116Q8NCU8 138 aa22.6■■□□□ 1.21
RBFOX1-207ENST00000547338 MTFR1LQ9H019 292 aa22.6■■□□□ 1.21
RBFOX1-207ENST00000547338 TFCP2L1Q9NZI6 479 aa22.6■■□□□ 1.21
RBFOX1-207ENST00000547338 UBR3Q6ZT12 1888 aa22.59■■□□□ 1.21
RBFOX1-207ENST00000547338 CABP4P57796 275 aa22.59■■□□□ 1.21
RBFOX1-207ENST00000547338 NFATC2IPQ8NCF5 419 aa22.59■■□□□ 1.21
RBFOX1-207ENST00000547338 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
RBFOX1-207ENST00000547338 RNMTO43148 476 aaKnown RBP22.57■■□□□ 1.2
RBFOX1-207ENST00000547338 COL5A3P25940 1745 aaPredicted RBP22.57■■□□□ 1.2
RBFOX1-207ENST00000547338 SMIM5Q71RC9 77 aa22.57■■□□□ 1.2
RBFOX1-207ENST00000547338 COL23A1Q86Y22 540 aaPredicted RBP22.57■■□□□ 1.2
RBFOX1-207ENST00000547338 PRKAR2BP31323 418 aa22.56■■□□□ 1.2
RBFOX1-207ENST00000547338 WDR43Q15061 677 aaKnown RBP eCLIP22.56■■□□□ 1.2
RBFOX1-207ENST00000547338 SLC52A2Q9HAB3 445 aa22.55■■□□□ 1.2
RBFOX1-207ENST00000547338 CICQ96RK0 1608 aaPredicted RBP22.55■■□□□ 1.2
RBFOX1-207ENST00000547338 ATP6V1AP38606 617 aa22.54■■□□□ 1.2
RBFOX1-207ENST00000547338 TJP1Q07157 1748 aa22.54■■□□□ 1.2
RBFOX1-207ENST00000547338 MAP3K5Q99683 1374 aa22.54■■□□□ 1.2
RBFOX1-207ENST00000547338 U2AF1L5P0DN76 240 aaPredicted RBP22.53■■□□□ 1.2
RBFOX1-207ENST00000547338 U2AF1Q01081 240 aaKnown RBP eCLIP22.53■■□□□ 1.2
RBFOX1-207ENST00000547338 TSHZ2Q9NRE2 1034 aa22.53■■□□□ 1.2
RBFOX1-207ENST00000547338 SIPA1L3O60292 1781 aaPredicted RBP22.53■■□□□ 1.2
RBFOX1-207ENST00000547338 SLC16A10Q8TF71 515 aa22.52■■□□□ 1.2
RBFOX1-207ENST00000547338 MYH14Q7Z406 1995 aaKnown RBP22.52■■□□□ 1.2
RBFOX1-207ENST00000547338 IL17REQ8NFR9 667 aa22.52■■□□□ 1.19
RBFOX1-207ENST00000547338 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.19
RBFOX1-207ENST00000547338 FCHSD2O94868 740 aa22.51■■□□□ 1.19
RBFOX1-207ENST00000547338 RBM42Q9BTD8 480 aaKnown RBP22.51■■□□□ 1.19
RBFOX1-207ENST00000547338 GAS2L2Q8NHY3 880 aa22.5■■□□□ 1.19
RBFOX1-207ENST00000547338 PPP1R1BQ9UD71 204 aaPredicted RBP22.5■■□□□ 1.19
RBFOX1-207ENST00000547338 ADAMTS8Q9UP79 889 aa22.5■■□□□ 1.19
RBFOX1-207ENST00000547338 UBR2Q8IWV8 1755 aa22.5■■□□□ 1.19
RBFOX1-207ENST00000547338 CEMIPQ8WUJ3 1361 aa22.49■■□□□ 1.19
RBFOX1-207ENST00000547338 PTCD1O75127 700 aaKnown RBP22.49■■□□□ 1.19
RBFOX1-207ENST00000547338 AK7Q96M32 723 aa22.49■■□□□ 1.19
RBFOX1-207ENST00000547338 GNAT3A8MTJ3 354 aa22.48■■□□□ 1.19
RBFOX1-207ENST00000547338 SLC39A6Q13433 755 aa22.48■■□□□ 1.19
RBFOX1-207ENST00000547338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.47■■□□□ 1.19
RBFOX1-207ENST00000547338 GNPATO15228 680 aa22.46■■□□□ 1.19
RBFOX1-207ENST00000547338 HMGB2P26583 209 aaKnown RBP22.46■■□□□ 1.19
RBFOX1-207ENST00000547338 PLEKHF1Q96S99 279 aa22.46■■□□□ 1.19
RBFOX1-207ENST00000547338 FHDC1Q9C0D6 1143 aaPredicted RBP22.46■■□□□ 1.19
RBFOX1-207ENST00000547338 CNTNAP4Q9C0A0 1308 aa22.45■■□□□ 1.19
RBFOX1-207ENST00000547338 PHF14O94880 888 aa22.45■■□□□ 1.18
RBFOX1-207ENST00000547338 SSFA2P28290 1259 aa22.45■■□□□ 1.18
RBFOX1-207ENST00000547338 MSL1Q68DK7 614 aa22.45■■□□□ 1.18
RBFOX1-207ENST00000547338 FLAD1Q8NFF5 587 aa22.45■■□□□ 1.18
RBFOX1-207ENST00000547338 ARXQ96QS3 562 aa22.45■■□□□ 1.18
RBFOX1-207ENST00000547338 RCAN3Q9UKA8 241 aa22.45■■□□□ 1.18
RBFOX1-207ENST00000547338 MSH5O43196 834 aa22.44■■□□□ 1.18
RBFOX1-207ENST00000547338 IRX6P78412 446 aaPredicted RBP22.44■■□□□ 1.18
RBFOX1-207ENST00000547338 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
RBFOX1-207ENST00000547338 NCBP3Q53F19 620 aaKnown RBP22.42■■□□□ 1.18
RBFOX1-207ENST00000547338 SYT17Q9BSW7 474 aa22.42■■□□□ 1.18
RBFOX1-207ENST00000547338 DLG5Q8TDM6 1919 aa22.42■■□□□ 1.18
RBFOX1-207ENST00000547338 C4AP0C0L4 1744 aa22.42■■□□□ 1.18
RBFOX1-207ENST00000547338 CRKLP46109 303 aaKnown RBP22.41■■□□□ 1.18
RBFOX1-207ENST00000547338 DNAJC10Q8IXB1 793 aa22.41■■□□□ 1.18
RBFOX1-207ENST00000547338 RRP1P56182 461 aaKnown RBP22.4■■□□□ 1.18
RBFOX1-207ENST00000547338 MCM10Q7L590 875 aa22.4■■□□□ 1.18
RBFOX1-207ENST00000547338 RPS6KA4O75676 772 aa22.39■■□□□ 1.17
RBFOX1-207ENST00000547338 DCTN1Q14203 1278 aa22.39■■□□□ 1.17
RBFOX1-207ENST00000547338 INTS5Q6P9B9 1019 aaKnown RBP22.39■■□□□ 1.17
RBFOX1-207ENST00000547338 ZNF521Q96K83 1311 aa22.38■■□□□ 1.17
RBFOX1-207ENST00000547338 POLD1P28340 1107 aa22.38■■□□□ 1.17
RBFOX1-207ENST00000547338 TEFQ10587 303 aa22.38■■□□□ 1.17
RBFOX1-207ENST00000547338 KCNQ3O43525 872 aa22.37■■□□□ 1.17
RBFOX1-207ENST00000547338 ZNF496Q96IT1 587 aaPredicted RBP22.37■■□□□ 1.17
RBFOX1-207ENST00000547338 RTCBQ9Y3I0 505 aaKnown RBP22.37■■□□□ 1.17
RBFOX1-207ENST00000547338 CYP19A1P11511 503 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms