RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 TNRC6CQ9HCJ0 1690 aaKnown RBP33.48■■■□□ 2.95
PRDM4-202ENST00000547188 LOC102724428A0A0B4J2F2 783 aa33.48■■■□□ 2.95
PRDM4-202ENST00000547188 SIK1P57059 783 aa33.48■■■□□ 2.95
PRDM4-202ENST00000547188 ITPK1Q13572 414 aa33.46■■■□□ 2.95
PRDM4-202ENST00000547188 RRS1Q15050 365 aaKnown RBP33.46■■■□□ 2.95
PRDM4-202ENST00000547188 SMC1BQ8NDV3 1235 aa33.46■■■□□ 2.95
PRDM4-202ENST00000547188 RNF181Q9P0P0 153 aa33.45■■■□□ 2.95
PRDM4-202ENST00000547188 SBF1O95248 1867 aa33.45■■■□□ 2.95
PRDM4-202ENST00000547188 C4AP0C0L4 1744 aa33.42■■■□□ 2.94
PRDM4-202ENST00000547188 KCNA3P22001 575 aa33.41■■■□□ 2.94
PRDM4-202ENST00000547188 RTL1A6NKG5 1358 aa33.41■■■□□ 2.94
PRDM4-202ENST00000547188 CCDC87Q9NVE4 849 aa33.4■■■□□ 2.94
PRDM4-202ENST00000547188 SMG6Q86US8 1419 aaKnown RBP33.39■■■□□ 2.94
PRDM4-202ENST00000547188 ATP6V1AP38606 617 aa33.39■■■□□ 2.94
PRDM4-202ENST00000547188 TMF1P82094 1093 aa33.39■■■□□ 2.94
PRDM4-202ENST00000547188 NLGN1Q8N2Q7 840 aa33.38■■■□□ 2.93
PRDM4-202ENST00000547188 ASAP1Q9ULH1 1129 aa33.38■■■□□ 2.93
PRDM4-202ENST00000547188 TRAPPC3LQ5T215 181 aa33.35■■■□□ 2.93
PRDM4-202ENST00000547188 DCAF5Q96JK2 942 aa33.34■■■□□ 2.93
PRDM4-202ENST00000547188 PIM2Q9P1W9 311 aa33.34■■■□□ 2.93
PRDM4-202ENST00000547188 HSP90AB2PQ58FF8 381 aa33.33■■■□□ 2.93
PRDM4-202ENST00000547188 PARP3Q9Y6F1 533 aa33.32■■■□□ 2.92
PRDM4-202ENST00000547188 RTCBQ9Y3I0 505 aaKnown RBP33.31■■■□□ 2.92
PRDM4-202ENST00000547188 DALRD3Q5D0E6 543 aaKnown RBP33.3■■■□□ 2.92
PRDM4-202ENST00000547188 ARHGEF1Q92888 912 aaKnown RBP33.3■■■□□ 2.92
PRDM4-202ENST00000547188 SIN3AQ96ST3 1273 aa33.3■■■□□ 2.92
PRDM4-202ENST00000547188 TMOD3Q9NYL9 352 aa33.3■■■□□ 2.92
PRDM4-202ENST00000547188 GYS1P13807 737 aa33.29■■■□□ 2.92
PRDM4-202ENST00000547188 NKX1-1Q15270 411 aaPredicted RBP33.29■■■□□ 2.92
PRDM4-202ENST00000547188 INSRP06213 1382 aa33.25■■■□□ 2.91
PRDM4-202ENST00000547188 CARD11Q9BXL7 1154 aa33.25■■■□□ 2.91
PRDM4-202ENST00000547188 GGNBP2Q9H3C7 697 aa33.25■■■□□ 2.91
PRDM4-202ENST00000547188 ATG3Q9NT62 314 aa33.25■■■□□ 2.91
PRDM4-202ENST00000547188 CHRNA5P30532 468 aa33.23■■■□□ 2.91
PRDM4-202ENST00000547188 RASSF7Q02833 373 aa33.23■■■□□ 2.91
PRDM4-202ENST00000547188 VEGFAP15692 232 aaPredicted RBP33.22■■■□□ 2.91
PRDM4-202ENST00000547188 RFC4P35249 363 aa33.22■■■□□ 2.91
PRDM4-202ENST00000547188 NEUROD1Q13562 356 aa33.22■■■□□ 2.91
PRDM4-202ENST00000547188 CCDC88AQ3V6T2 1871 aa33.22■■■□□ 2.91
PRDM4-202ENST00000547188 PUS7Q96PZ0 661 aaKnown RBP33.2■■■□□ 2.91
PRDM4-202ENST00000547188 SLC4A9Q96Q91 983 aa33.2■■■□□ 2.91
PRDM4-202ENST00000547188 MYH14Q7Z406 1995 aaKnown RBP33.2■■■□□ 2.9
PRDM4-202ENST00000547188 SPG7Q9UQ90 795 aa33.19■■■□□ 2.9
PRDM4-202ENST00000547188 COL5A3P25940 1745 aaPredicted RBP33.19■■■□□ 2.9
PRDM4-202ENST00000547188 FYB1O15117 783 aa33.18■■■□□ 2.9
PRDM4-202ENST00000547188 MKRN1Q9UHC7 482 aaKnown RBP33.18■■■□□ 2.9
PRDM4-202ENST00000547188 FLT4P35916 1363 aa33.18■■■□□ 2.9
PRDM4-202ENST00000547188 KDRP35968 1356 aa33.18■■■□□ 2.9
PRDM4-202ENST00000547188 GLTPD2A6NH11 291 aa33.17■■■□□ 2.9
PRDM4-202ENST00000547188 FOXN1O15353 648 aa33.17■■■□□ 2.9
PRDM4-202ENST00000547188 ADRA2BP18089 450 aa33.17■■■□□ 2.9
PRDM4-202ENST00000547188 RBM42Q9BTD8 480 aaKnown RBP33.17■■■□□ 2.9
PRDM4-202ENST00000547188 RPS6KA4O75676 772 aa33.14■■■□□ 2.9
PRDM4-202ENST00000547188 DDR1Q08345 913 aa33.14■■■□□ 2.9
PRDM4-202ENST00000547188 TIAM2Q8IVF5 1701 aa33.14■■■□□ 2.89
PRDM4-202ENST00000547188 RC3H1Q5TC82 1133 aaKnown RBP33.13■■■□□ 2.89
PRDM4-202ENST00000547188 SRP68Q9UHB9 627 aaKnown RBP33.13■■■□□ 2.89
PRDM4-202ENST00000547188 ZC3H4Q9UPT8 1303 aaKnown RBP33.12■■■□□ 2.89
PRDM4-202ENST00000547188 KDM6AO15550 1401 aaPredicted RBP33.11■■■□□ 2.89
PRDM4-202ENST00000547188 ZNF831Q5JPB2 1677 aa33.1■■■□□ 2.89
PRDM4-202ENST00000547188 CNTNAP4Q9C0A0 1308 aa33.1■■■□□ 2.89
PRDM4-202ENST00000547188 PHKG2P15735 406 aa33.1■■■□□ 2.89
PRDM4-202ENST00000547188 FKBP8Q14318 412 aa33.1■■■□□ 2.89
PRDM4-202ENST00000547188 FAM161AQ3B820 660 aa33.1■■■□□ 2.89
PRDM4-202ENST00000547188 POTECB2RU33 542 aa33.09■■■□□ 2.89
PRDM4-202ENST00000547188 LMNB1P20700 586 aa33.08■■■□□ 2.89
PRDM4-202ENST00000547188 IFNL2Q8IZJ0 200 aa33.08■■■□□ 2.89
PRDM4-202ENST00000547188 PRDM10Q9NQV6 1147 aa33.08■■■□□ 2.89
PRDM4-202ENST00000547188 NCAPD2Q15021 1401 aa33.08■■■□□ 2.89
PRDM4-202ENST00000547188 KIF20BQ96Q89 1820 aa33.07■■■□□ 2.89
PRDM4-202ENST00000547188 EMILIN1Q9Y6C2 1016 aa33.07■■■□□ 2.88
PRDM4-202ENST00000547188 CREBZFQ9NS37 354 aa33.06■■■□□ 2.88
PRDM4-202ENST00000547188 KIF24Q5T7B8 1368 aa33.04■■■□□ 2.88
PRDM4-202ENST00000547188 TESK2Q96S53 571 aa33.02■■■□□ 2.88
PRDM4-202ENST00000547188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.02■■■□□ 2.88
PRDM4-202ENST00000547188 PPM1GO15355 546 aaPredicted RBP33.01■■■□□ 2.87
PRDM4-202ENST00000547188 PCDH10Q9P2E7 1040 aa33.01■■■□□ 2.87
PRDM4-202ENST00000547188 USP42Q9H9J4 1324 aaKnown RBP33.01■■■□□ 2.87
PRDM4-202ENST00000547188 POLRMTO00411 1230 aaKnown RBP33■■■□□ 2.87
PRDM4-202ENST00000547188 EYA1Q99502 592 aa33■■■□□ 2.87
PRDM4-202ENST00000547188 TONSLQ96HA7 1378 aa32.99■■■□□ 2.87
PRDM4-202ENST00000547188 CTCFP49711 727 aaPredicted RBP32.99■■■□□ 2.87
PRDM4-202ENST00000547188 AFDNP55196 1824 aaKnown RBP32.99■■■□□ 2.87
PRDM4-202ENST00000547188 AIDAQ96BJ3 306 aa32.97■■■□□ 2.87
PRDM4-202ENST00000547188 CNTNAP1P78357 1384 aa32.96■■■□□ 2.87
PRDM4-202ENST00000547188 POTEIP0CG38 1075 aa32.96■■■□□ 2.87
PRDM4-202ENST00000547188 POTEJP0CG39 1038 aa32.96■■■□□ 2.87
PRDM4-202ENST00000547188 CRKLP46109 303 aaKnown RBP32.96■■■□□ 2.87
PRDM4-202ENST00000547188 CHADLQ6NUI6 762 aa32.96■■■□□ 2.87
PRDM4-202ENST00000547188 DLEC1Q9Y238 1755 aa32.96■■■□□ 2.87
PRDM4-202ENST00000547188 ST20-MTHFSA0A0A6YYL1 179 aa32.95■■■□□ 2.87
PRDM4-202ENST00000547188 LBX1P52954 281 aa32.95■■■□□ 2.87
PRDM4-202ENST00000547188 ABHD8Q96I13 439 aa32.95■■■□□ 2.87
PRDM4-202ENST00000547188 TM4SF1P30408 202 aa32.94■■■□□ 2.86
PRDM4-202ENST00000547188 NFKBIEO00221 500 aa32.93■■■□□ 2.86
PRDM4-202ENST00000547188 PTCD1O75127 700 aaKnown RBP32.93■■■□□ 2.86
PRDM4-202ENST00000547188 DPY19L2Q6NUT2 758 aa32.93■■■□□ 2.86
PRDM4-202ENST00000547188 DICER1Q9UPY3 1922 aaKnown RBP32.91■■■□□ 2.86
PRDM4-202ENST00000547188 ERVV-2B6SEH9 535 aa32.91■■■□□ 2.86
PRDM4-202ENST00000547188 ADAMTS7Q9UKP4 1686 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms