RNA–Protein interactions for RNA: ENST00000547130.5

PFDN5-204, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-204ENST00000547130 TJP1Q07157 1748 aa16.26■□□□□ 0.19
PFDN5-204ENST00000547130 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
PFDN5-204ENST00000547130 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
PFDN5-204ENST00000547130 NUDCQ9Y266 331 aa16.26■□□□□ 0.19
PFDN5-204ENST00000547130 COL24A1Q17RW2 1714 aa16.25■□□□□ 0.19
PFDN5-204ENST00000547130 ATP6V1AP38606 617 aa16.25■□□□□ 0.19
PFDN5-204ENST00000547130 ATG3Q9NT62 314 aa16.25■□□□□ 0.19
PFDN5-204ENST00000547130 CICQ96RK0 1608 aaPredicted RBP16.24■□□□□ 0.19
PFDN5-204ENST00000547130 PHF14O94880 888 aa16.24■□□□□ 0.19
PFDN5-204ENST00000547130 PTGER2P43116 358 aa16.24■□□□□ 0.19
PFDN5-204ENST00000547130 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
PFDN5-204ENST00000547130 MAP3K5Q99683 1374 aa16.24■□□□□ 0.19
PFDN5-204ENST00000547130 U2AF1L5P0DN76 240 aaPredicted RBP16.23■□□□□ 0.19
PFDN5-204ENST00000547130 PRKAR2BP31323 418 aa16.23■□□□□ 0.19
PFDN5-204ENST00000547130 ZEB1P37275 1124 aaPredicted RBP16.23■□□□□ 0.19
PFDN5-204ENST00000547130 U2AF1Q01081 240 aaKnown RBP eCLIP16.23■□□□□ 0.19
PFDN5-204ENST00000547130 DDX10Q13206 875 aaKnown RBP16.23■□□□□ 0.19
PFDN5-204ENST00000547130 LINC00116Q8NCU8 138 aa16.23■□□□□ 0.19
PFDN5-204ENST00000547130 POLD1P28340 1107 aa16.22■□□□□ 0.19
PFDN5-204ENST00000547130 KLHL34Q8N239 644 aa16.22■□□□□ 0.19
PFDN5-204ENST00000547130 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
PFDN5-204ENST00000547130 SLC16A10Q8TF71 515 aa16.22■□□□□ 0.19
PFDN5-204ENST00000547130 SIPA1L3O60292 1781 aaPredicted RBP16.22■□□□□ 0.19
PFDN5-204ENST00000547130 C4AP0C0L4 1744 aa16.22■□□□□ 0.19
PFDN5-204ENST00000547130 UBR2Q8IWV8 1755 aa16.21■□□□□ 0.19
PFDN5-204ENST00000547130 GNPATO15228 680 aa16.21■□□□□ 0.19
PFDN5-204ENST00000547130 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
PFDN5-204ENST00000547130 ITPK1Q13572 414 aa16.21■□□□□ 0.19
PFDN5-204ENST00000547130 NFATC2IPQ8NCF5 419 aa16.21■□□□□ 0.19
PFDN5-204ENST00000547130 RNMTO43148 476 aaKnown RBP16.2■□□□□ 0.18
PFDN5-204ENST00000547130 MSL1Q68DK7 614 aa16.2■□□□□ 0.18
PFDN5-204ENST00000547130 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
PFDN5-204ENST00000547130 FLAD1Q8NFF5 587 aa16.2■□□□□ 0.18
PFDN5-204ENST00000547130 ARXQ96QS3 562 aa16.2■□□□□ 0.18
PFDN5-204ENST00000547130 RSPH6AQ9H0K4 717 aa16.2■□□□□ 0.18
PFDN5-204ENST00000547130 SLC52A2Q9HAB3 445 aa16.2■□□□□ 0.18
PFDN5-204ENST00000547130 LGR6Q9HBX8 967 aa16.19■□□□□ 0.18
PFDN5-204ENST00000547130 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.18■□□□□ 0.18
PFDN5-204ENST00000547130 SGIP1Q9BQI5 828 aa16.18■□□□□ 0.18
PFDN5-204ENST00000547130 FHDC1Q9C0D6 1143 aaPredicted RBP16.18■□□□□ 0.18
PFDN5-204ENST00000547130 KCPQ6ZWJ8 1503 aa16.18■□□□□ 0.18
PFDN5-204ENST00000547130 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
PFDN5-204ENST00000547130 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
PFDN5-204ENST00000547130 GNAT3A8MTJ3 354 aa16.17■□□□□ 0.18
PFDN5-204ENST00000547130 NEFMP07197 916 aa16.17■□□□□ 0.18
PFDN5-204ENST00000547130 SSFA2P28290 1259 aa16.17■□□□□ 0.18
PFDN5-204ENST00000547130 TEFQ10587 303 aa16.17■□□□□ 0.18
PFDN5-204ENST00000547130 SMIM5Q71RC9 77 aa16.17■□□□□ 0.18
PFDN5-204ENST00000547130 RALBP1Q15311 655 aa16.16■□□□□ 0.18
PFDN5-204ENST00000547130 AMIGO3Q86WK7 504 aa16.16■□□□□ 0.18
PFDN5-204ENST00000547130 SLC4A9Q96Q91 983 aa16.16■□□□□ 0.18
PFDN5-204ENST00000547130 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
PFDN5-204ENST00000547130 MYH14Q7Z406 1995 aaKnown RBP16.15■□□□□ 0.18
PFDN5-204ENST00000547130 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
PFDN5-204ENST00000547130 TTC5Q8N0Z6 440 aa16.15■□□□□ 0.18
PFDN5-204ENST00000547130 PHACTR3Q96KR7 559 aa16.15■□□□□ 0.18
PFDN5-204ENST00000547130 RTCBQ9Y3I0 505 aaKnown RBP16.15■□□□□ 0.18
PFDN5-204ENST00000547130 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
PFDN5-204ENST00000547130 MYBBP1AQ9BQG0 1328 aaKnown RBP16.14■□□□□ 0.17
PFDN5-204ENST00000547130 FCHSD2O94868 740 aa16.13■□□□□ 0.17
PFDN5-204ENST00000547130 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
PFDN5-204ENST00000547130 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
PFDN5-204ENST00000547130 SYT17Q9BSW7 474 aa16.12■□□□□ 0.17
PFDN5-204ENST00000547130 CEMIPQ8WUJ3 1361 aa16.11■□□□□ 0.17
PFDN5-204ENST00000547130 TRAPPC3LQ5T215 181 aa16.1■□□□□ 0.17
PFDN5-204ENST00000547130 DNAJC10Q8IXB1 793 aa16.1■□□□□ 0.17
PFDN5-204ENST00000547130 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
PFDN5-204ENST00000547130 ADRA2BP18089 450 aa16.09■□□□□ 0.17
PFDN5-204ENST00000547130 RFC4P35249 363 aa16.09■□□□□ 0.17
PFDN5-204ENST00000547130 RC3H1Q5TC82 1133 aaKnown RBP16.09■□□□□ 0.17
PFDN5-204ENST00000547130 MCM10Q7L590 875 aa16.09■□□□□ 0.17
PFDN5-204ENST00000547130 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.17
PFDN5-204ENST00000547130 RPS6KA4O75676 772 aa16.08■□□□□ 0.16
PFDN5-204ENST00000547130 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
PFDN5-204ENST00000547130 PNNQ9H307 717 aaKnown RBP16.08■□□□□ 0.16
PFDN5-204ENST00000547130 CCDC87Q9NVE4 849 aa16.08■□□□□ 0.16
PFDN5-204ENST00000547130 KDM3BQ7LBC6 1761 aa16.08■□□□□ 0.16
PFDN5-204ENST00000547130 BTBD11A6QL63 1104 aa16.07■□□□□ 0.16
PFDN5-204ENST00000547130 ZNF790Q6PG37 636 aa16.07■□□□□ 0.16
PFDN5-204ENST00000547130 SCN7AQ01118 1682 aa16.07■□□□□ 0.16
PFDN5-204ENST00000547130 COL15A1P39059 1388 aa16.06■□□□□ 0.16
PFDN5-204ENST00000547130 HEG1Q9ULI3 1381 aa16.06■□□□□ 0.16
PFDN5-204ENST00000547130 DCTN1Q14203 1278 aa16.06■□□□□ 0.16
PFDN5-204ENST00000547130 WDR43Q15061 677 aaKnown RBP eCLIP16.06■□□□□ 0.16
PFDN5-204ENST00000547130 VSIG10Q8N0Z9 540 aa16.06■□□□□ 0.16
PFDN5-204ENST00000547130 NLGN2Q8NFZ4 835 aa16.06■□□□□ 0.16
PFDN5-204ENST00000547130 ARHGEF1Q92888 912 aaKnown RBP16.06■□□□□ 0.16
PFDN5-204ENST00000547130 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
PFDN5-204ENST00000547130 FMNL2Q96PY5 1086 aa16.05■□□□□ 0.16
PFDN5-204ENST00000547130 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
PFDN5-204ENST00000547130 SOS1Q07889 1333 aaPredicted RBP16.04■□□□□ 0.16
PFDN5-204ENST00000547130 KIF13BQ9NQT8 1826 aa16.04■□□□□ 0.16
PFDN5-204ENST00000547130 MMP10P09238 476 aa16.04■□□□□ 0.16
PFDN5-204ENST00000547130 CYP19A1P11511 503 aaPredicted RBP16.04■□□□□ 0.16
PFDN5-204ENST00000547130 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
PFDN5-204ENST00000547130 PRKRIP1Q9H875 184 aaPredicted RBP16.04■□□□□ 0.16
PFDN5-204ENST00000547130 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
PFDN5-204ENST00000547130 USP42Q9H9J4 1324 aaKnown RBP16.03■□□□□ 0.16
PFDN5-204ENST00000547130 HTATSF1O43719 755 aaKnown RBP16.03■□□□□ 0.16
PFDN5-204ENST00000547130 CANXP27824 592 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms