RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
RAB5C-203ENST00000546881 ATG3Q9NT62 314 aa15.75■□□□□ 0.11
RAB5C-203ENST00000546881 IGSF1Q8N6C5 1336 aa15.74■□□□□ 0.11
RAB5C-203ENST00000546881 GOLGB1Q14789 3259 aaKnown RBP15.74■□□□□ 0.11
RAB5C-203ENST00000546881 ATP10DQ9P241 1426 aa15.74■□□□□ 0.11
RAB5C-203ENST00000546881 HSP90AB1P08238 724 aaKnown RBP15.72■□□□□ 0.11
RAB5C-203ENST00000546881 PLEKHO1Q53GL0 409 aaPredicted RBP15.72■□□□□ 0.11
RAB5C-203ENST00000546881 ZNF530Q6P9A1 599 aaPredicted RBP15.72■□□□□ 0.11
RAB5C-203ENST00000546881 MORC1Q86VD1 984 aa15.72■□□□□ 0.11
RAB5C-203ENST00000546881 ZNF526Q8TF50 670 aaPredicted RBP15.72■□□□□ 0.11
RAB5C-203ENST00000546881 MMP10P09238 476 aa15.71■□□□□ 0.11
RAB5C-203ENST00000546881 CABP4P57796 275 aa15.71■□□□□ 0.11
RAB5C-203ENST00000546881 DCAF5Q96JK2 942 aa15.71■□□□□ 0.11
RAB5C-203ENST00000546881 RTCBQ9Y3I0 505 aaKnown RBP15.71■□□□□ 0.11
RAB5C-203ENST00000546881 ERVV-2B6SEH9 535 aa15.7■□□□□ 0.1
RAB5C-203ENST00000546881 TRAPPC3LQ5T215 181 aa15.7■□□□□ 0.1
RAB5C-203ENST00000546881 CCER1Q8TC90 406 aaPredicted RBP15.7■□□□□ 0.1
RAB5C-203ENST00000546881 GPBP1L1Q9HC44 474 aaPredicted RBP15.7■□□□□ 0.1
RAB5C-203ENST00000546881 AMOTQ4VCS5 1084 aa15.69■□□□□ 0.1
RAB5C-203ENST00000546881 C1orf141Q5JVX7 400 aa15.69■□□□□ 0.1
RAB5C-203ENST00000546881 AEBP1Q8IUX7 1158 aa15.69■□□□□ 0.1
RAB5C-203ENST00000546881 KDRP35968 1356 aa15.69■□□□□ 0.1
RAB5C-203ENST00000546881 PLEKHG2Q9H7P9 1386 aa15.68■□□□□ 0.1
RAB5C-203ENST00000546881 MTHFSP49914 203 aa15.68■□□□□ 0.1
RAB5C-203ENST00000546881 SLC4A9Q96Q91 983 aa15.68■□□□□ 0.1
RAB5C-203ENST00000546881 KDM6AO15550 1401 aaPredicted RBP15.68■□□□□ 0.1
RAB5C-203ENST00000546881 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
RAB5C-203ENST00000546881 SULT6B1Q6IMI4 303 aa15.67■□□□□ 0.1
RAB5C-203ENST00000546881 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
RAB5C-203ENST00000546881 CICQ96RK0 1608 aaPredicted RBP15.67■□□□□ 0.1
RAB5C-203ENST00000546881 RFC4P35249 363 aa15.66■□□□□ 0.1
RAB5C-203ENST00000546881 NLGN1Q8N2Q7 840 aa15.66■□□□□ 0.1
RAB5C-203ENST00000546881 ARHGEF1Q92888 912 aaKnown RBP15.66■□□□□ 0.1
RAB5C-203ENST00000546881 RC3H1Q5TC82 1133 aaKnown RBP15.65■□□□□ 0.1
RAB5C-203ENST00000546881 CNTNAP4Q9C0A0 1308 aa15.65■□□□□ 0.1
RAB5C-203ENST00000546881 ADCY9O60503 1353 aa15.64■□□□□ 0.09
RAB5C-203ENST00000546881 A0A0G2JLW4 131 aa15.64■□□□□ 0.09
RAB5C-203ENST00000546881 RPS6KA4O75676 772 aa15.64■□□□□ 0.09
RAB5C-203ENST00000546881 ADRA2BP18089 450 aa15.64■□□□□ 0.09
RAB5C-203ENST00000546881 COL5A3P25940 1745 aaPredicted RBP15.64■□□□□ 0.09
RAB5C-203ENST00000546881 NFATC2IPQ8NCF5 419 aa15.64■□□□□ 0.09
RAB5C-203ENST00000546881 CCDC87Q9NVE4 849 aa15.64■□□□□ 0.09
RAB5C-203ENST00000546881 BCS1LQ9Y276 419 aa15.64■□□□□ 0.09
RAB5C-203ENST00000546881 PXDNLA1KZ92 1463 aa15.64■□□□□ 0.09
RAB5C-203ENST00000546881 ZNF831Q5JPB2 1677 aa15.63■□□□□ 0.09
RAB5C-203ENST00000546881 N4BP2Q86UW6 1770 aaPredicted RBP15.63■□□□□ 0.09
RAB5C-203ENST00000546881 GYS1P13807 737 aa15.63■□□□□ 0.09
RAB5C-203ENST00000546881 PARP3Q9Y6F1 533 aa15.63■□□□□ 0.09
RAB5C-203ENST00000546881 TGFB2P61812 414 aa15.62■□□□□ 0.09
RAB5C-203ENST00000546881 C10orf71Q711Q0 1435 aa15.61■□□□□ 0.09
RAB5C-203ENST00000546881 C4AP0C0L4 1744 aa15.61■□□□□ 0.09
RAB5C-203ENST00000546881 IL13P35225 146 aa15.61■□□□□ 0.09
RAB5C-203ENST00000546881 CRKLP46109 303 aaKnown RBP15.61■□□□□ 0.09
RAB5C-203ENST00000546881 SRP68Q9UHB9 627 aaKnown RBP15.61■□□□□ 0.09
RAB5C-203ENST00000546881 KIF13BQ9NQT8 1826 aa15.6■□□□□ 0.09
RAB5C-203ENST00000546881 FCHSD2O94868 740 aa15.6■□□□□ 0.09
RAB5C-203ENST00000546881 DPEP1P16444 411 aa15.6■□□□□ 0.09
RAB5C-203ENST00000546881 ARHGAP27Q6ZUM4 889 aa15.6■□□□□ 0.09
RAB5C-203ENST00000546881 KIAA1551Q9HCM1 1747 aa15.6■□□□□ 0.09
RAB5C-203ENST00000546881 HMOX1P09601 288 aa15.59■□□□□ 0.09
RAB5C-203ENST00000546881 MYH14Q7Z406 1995 aaKnown RBP15.58■□□□□ 0.09
RAB5C-203ENST00000546881 CNGB1Q14028 1251 aaPredicted RBP15.58■□□□□ 0.08
RAB5C-203ENST00000546881 AKAP4Q5JQC9 854 aa15.58■□□□□ 0.08
RAB5C-203ENST00000546881 TJP1Q07157 1748 aa15.57■□□□□ 0.08
RAB5C-203ENST00000546881 FKBP8Q14318 412 aa15.57■□□□□ 0.08
RAB5C-203ENST00000546881 AMER1Q5JTC6 1135 aaPredicted RBP15.57■□□□□ 0.08
RAB5C-203ENST00000546881 KIF7Q2M1P5 1343 aa15.57■□□□□ 0.08
RAB5C-203ENST00000546881 SCN11AQ9UI33 1791 aa15.57■□□□□ 0.08
RAB5C-203ENST00000546881 HSPA6P17066 643 aa15.56■□□□□ 0.08
RAB5C-203ENST00000546881 CC2D1BQ5T0F9 858 aaKnown RBP15.56■□□□□ 0.08
RAB5C-203ENST00000546881 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
RAB5C-203ENST00000546881 SLC52A2Q9HAB3 445 aa15.56■□□□□ 0.08
RAB5C-203ENST00000546881 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
RAB5C-203ENST00000546881 USP42Q9H9J4 1324 aaKnown RBP15.56■□□□□ 0.08
RAB5C-203ENST00000546881 KIF3CO14782 793 aa15.55■□□□□ 0.08
RAB5C-203ENST00000546881 SLC39A6Q13433 755 aa15.55■□□□□ 0.08
RAB5C-203ENST00000546881 INTS5Q6P9B9 1019 aaKnown RBP15.55■□□□□ 0.08
RAB5C-203ENST00000546881 RNMTO43148 476 aaKnown RBP15.54■□□□□ 0.08
RAB5C-203ENST00000546881 ZPR1O75312 459 aa15.54■□□□□ 0.08
RAB5C-203ENST00000546881 DDR1Q08345 913 aa15.54■□□□□ 0.08
RAB5C-203ENST00000546881 PIM2Q9P1W9 311 aa15.54■□□□□ 0.08
RAB5C-203ENST00000546881 DIAPH1O60610 1272 aaKnown RBP15.53■□□□□ 0.08
RAB5C-203ENST00000546881 MTHFSDQ2M296 383 aaKnown RBP15.53■□□□□ 0.08
RAB5C-203ENST00000546881 USPL1Q5W0Q7 1092 aa15.53■□□□□ 0.08
RAB5C-203ENST00000546881 KCNA3P22001 575 aa15.52■□□□□ 0.08
RAB5C-203ENST00000546881 CHRNA5P30532 468 aa15.52■□□□□ 0.08
RAB5C-203ENST00000546881 DALRD3Q5D0E6 543 aaKnown RBP15.52■□□□□ 0.08
RAB5C-203ENST00000546881 C9orf131Q5VYM1 1079 aa15.52■□□□□ 0.08
RAB5C-203ENST00000546881 SOS1Q07889 1333 aaPredicted RBP15.51■□□□□ 0.07
RAB5C-203ENST00000546881 BRCA1P38398 1863 aaKnown RBP15.51■□□□□ 0.07
RAB5C-203ENST00000546881 POLRMTO00411 1230 aaKnown RBP15.51■□□□□ 0.07
RAB5C-203ENST00000546881 CYP19A1P11511 503 aaPredicted RBP15.51■□□□□ 0.07
RAB5C-203ENST00000546881 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
RAB5C-203ENST00000546881 NMRK2Q9NPI5 230 aa15.5■□□□□ 0.07
RAB5C-203ENST00000546881 MRC1P22897 1456 aa15.5■□□□□ 0.07
RAB5C-203ENST00000546881 VIRMAQ69YN4 1812 aaKnown RBP15.5■□□□□ 0.07
RAB5C-203ENST00000546881 COL15A1P39059 1388 aa15.49■□□□□ 0.07
RAB5C-203ENST00000546881 KCPQ6ZWJ8 1503 aa15.49■□□□□ 0.07
RAB5C-203ENST00000546881 TM4SF1P30408 202 aa15.49■□□□□ 0.07
RAB5C-203ENST00000546881 TTC5Q8N0Z6 440 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms