RNA–Protein interactions for RNA: ENST00000546653.5

VDR-203, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-203ENST00000546653 HSPA1BP0DMV9 641 aaKnown RBP18.92■□□□□ 0.62
VDR-203ENST00000546653 SIK1P57059 783 aa18.92■□□□□ 0.62
VDR-203ENST00000546653 ITPK1Q13572 414 aa18.92■□□□□ 0.62
VDR-203ENST00000546653 C4AP0C0L4 1744 aa18.91■□□□□ 0.62
VDR-203ENST00000546653 RRS1Q15050 365 aaKnown RBP18.91■□□□□ 0.62
VDR-203ENST00000546653 RRAGCQ9HB90 399 aa18.91■□□□□ 0.62
VDR-203ENST00000546653 SLC34A2O95436 690 aa18.9■□□□□ 0.62
VDR-203ENST00000546653 KCNA3P22001 575 aa18.9■□□□□ 0.62
VDR-203ENST00000546653 KDM2BQ8NHM5 1336 aa18.89■□□□□ 0.61
VDR-203ENST00000546653 NKX1-1Q15270 411 aaPredicted RBP18.87■□□□□ 0.61
VDR-203ENST00000546653 SMG6Q86US8 1419 aaKnown RBP18.87■□□□□ 0.61
VDR-203ENST00000546653 SMC1BQ8NDV3 1235 aa18.87■□□□□ 0.61
VDR-203ENST00000546653 SIN3AQ96ST3 1273 aa18.87■□□□□ 0.61
VDR-203ENST00000546653 HSP90AB2PQ58FF8 381 aa18.86■□□□□ 0.61
VDR-203ENST00000546653 NLGN1Q8N2Q7 840 aa18.86■□□□□ 0.61
VDR-203ENST00000546653 RNF181Q9P0P0 153 aa18.86■□□□□ 0.61
VDR-203ENST00000546653 ASAP1Q9ULH1 1129 aa18.86■□□□□ 0.61
VDR-203ENST00000546653 ATP6V1AP38606 617 aa18.85■□□□□ 0.61
VDR-203ENST00000546653 TMF1P82094 1093 aa18.85■□□□□ 0.61
VDR-203ENST00000546653 DCAF5Q96JK2 942 aa18.85■□□□□ 0.61
VDR-203ENST00000546653 PUS7Q96PZ0 661 aaKnown RBP18.85■□□□□ 0.61
VDR-203ENST00000546653 CCDC87Q9NVE4 849 aa18.85■□□□□ 0.61
VDR-203ENST00000546653 INSRP06213 1382 aa18.84■□□□□ 0.61
VDR-203ENST00000546653 GYS1P13807 737 aa18.83■□□□□ 0.6
VDR-203ENST00000546653 TRAPPC3LQ5T215 181 aa18.83■□□□□ 0.6
VDR-203ENST00000546653 PIM2Q9P1W9 311 aa18.82■□□□□ 0.6
VDR-203ENST00000546653 MYH14Q7Z406 1995 aaKnown RBP18.82■□□□□ 0.6
VDR-203ENST00000546653 COL5A3P25940 1745 aaPredicted RBP18.82■□□□□ 0.6
VDR-203ENST00000546653 ARHGEF1Q92888 912 aaKnown RBP18.81■□□□□ 0.6
VDR-203ENST00000546653 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
VDR-203ENST00000546653 ATG3Q9NT62 314 aa18.81■□□□□ 0.6
VDR-203ENST00000546653 TMOD3Q9NYL9 352 aa18.81■□□□□ 0.6
VDR-203ENST00000546653 RTCBQ9Y3I0 505 aaKnown RBP18.81■□□□□ 0.6
VDR-203ENST00000546653 NCAPD2Q15021 1401 aa18.81■□□□□ 0.6
VDR-203ENST00000546653 KDRP35968 1356 aa18.81■□□□□ 0.6
VDR-203ENST00000546653 ZNF831Q5JPB2 1677 aa18.8■□□□□ 0.6
VDR-203ENST00000546653 FYB1O15117 783 aa18.8■□□□□ 0.6
VDR-203ENST00000546653 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
VDR-203ENST00000546653 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
VDR-203ENST00000546653 SLC4A9Q96Q91 983 aa18.8■□□□□ 0.6
VDR-203ENST00000546653 GGNBP2Q9H3C7 697 aa18.8■□□□□ 0.6
VDR-203ENST00000546653 PARP3Q9Y6F1 533 aa18.79■□□□□ 0.6
VDR-203ENST00000546653 FLT4P35916 1363 aa18.79■□□□□ 0.6
VDR-203ENST00000546653 KDM6AO15550 1401 aaPredicted RBP18.77■□□□□ 0.6
VDR-203ENST00000546653 ADRA2BP18089 450 aa18.77■□□□□ 0.6
VDR-203ENST00000546653 CCDC88AQ3V6T2 1871 aa18.77■□□□□ 0.6
VDR-203ENST00000546653 SPG7Q9UQ90 795 aa18.76■□□□□ 0.59
VDR-203ENST00000546653 KIF24Q5T7B8 1368 aa18.76■□□□□ 0.59
VDR-203ENST00000546653 CHRNA5P30532 468 aa18.75■□□□□ 0.59
VDR-203ENST00000546653 RFC4P35249 363 aa18.75■□□□□ 0.59
VDR-203ENST00000546653 RC3H1Q5TC82 1133 aaKnown RBP18.75■□□□□ 0.59
VDR-203ENST00000546653 TESK2Q96S53 571 aa18.75■□□□□ 0.59
VDR-203ENST00000546653 ZC3H4Q9UPT8 1303 aaKnown RBP18.74■□□□□ 0.59
VDR-203ENST00000546653 KIF20BQ96Q89 1820 aa18.74■□□□□ 0.59
VDR-203ENST00000546653 RPS6KA4O75676 772 aa18.74■□□□□ 0.59
VDR-203ENST00000546653 VEGFAP15692 232 aaPredicted RBP18.74■□□□□ 0.59
VDR-203ENST00000546653 RASSF7Q02833 373 aa18.74■□□□□ 0.59
VDR-203ENST00000546653 DDR1Q08345 913 aa18.74■□□□□ 0.59
VDR-203ENST00000546653 TIAM2Q8IVF5 1701 aa18.74■□□□□ 0.59
VDR-203ENST00000546653 CNTNAP4Q9C0A0 1308 aa18.74■□□□□ 0.59
VDR-203ENST00000546653 GLTPD2A6NH11 291 aa18.73■□□□□ 0.59
VDR-203ENST00000546653 PHKG2P15735 406 aa18.73■□□□□ 0.59
VDR-203ENST00000546653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.72■□□□□ 0.59
VDR-203ENST00000546653 TONSLQ96HA7 1378 aa18.71■□□□□ 0.59
VDR-203ENST00000546653 POTECB2RU33 542 aa18.71■□□□□ 0.59
VDR-203ENST00000546653 SRP68Q9UHB9 627 aaKnown RBP18.71■□□□□ 0.59
VDR-203ENST00000546653 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
VDR-203ENST00000546653 FOXN1O15353 648 aa18.7■□□□□ 0.58
VDR-203ENST00000546653 FKBP8Q14318 412 aa18.7■□□□□ 0.58
VDR-203ENST00000546653 IFNL2Q8IZJ0 200 aa18.7■□□□□ 0.58
VDR-203ENST00000546653 RBM42Q9BTD8 480 aaKnown RBP18.7■□□□□ 0.58
VDR-203ENST00000546653 ANKRD26Q9UPS8 1709 aa18.69■□□□□ 0.58
VDR-203ENST00000546653 ADAMTS7Q9UKP4 1686 aa18.69■□□□□ 0.58
VDR-203ENST00000546653 LMNB1P20700 586 aa18.68■□□□□ 0.58
VDR-203ENST00000546653 MKRN1Q9UHC7 482 aaKnown RBP18.68■□□□□ 0.58
VDR-203ENST00000546653 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
VDR-203ENST00000546653 DLEC1Q9Y238 1755 aa18.68■□□□□ 0.58
VDR-203ENST00000546653 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
VDR-203ENST00000546653 EYA1Q99502 592 aa18.67■□□□□ 0.58
VDR-203ENST00000546653 PRDM10Q9NQV6 1147 aa18.67■□□□□ 0.58
VDR-203ENST00000546653 ST20-MTHFSA0A0A6YYL1 179 aa18.66■□□□□ 0.58
VDR-203ENST00000546653 POLRMTO00411 1230 aaKnown RBP18.66■□□□□ 0.58
VDR-203ENST00000546653 CREBZFQ9NS37 354 aa18.66■□□□□ 0.58
VDR-203ENST00000546653 TM4SF1P30408 202 aa18.65■□□□□ 0.58
VDR-203ENST00000546653 DICER1Q9UPY3 1922 aaKnown RBP18.64■□□□□ 0.57
VDR-203ENST00000546653 TJP1Q07157 1748 aa18.63■□□□□ 0.57
VDR-203ENST00000546653 ERVV-2B6SEH9 535 aa18.63■□□□□ 0.57
VDR-203ENST00000546653 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
VDR-203ENST00000546653 NFKBIEO00221 500 aa18.62■□□□□ 0.57
VDR-203ENST00000546653 CRKLP46109 303 aaKnown RBP18.62■□□□□ 0.57
VDR-203ENST00000546653 FAM161AQ3B820 660 aa18.62■□□□□ 0.57
VDR-203ENST00000546653 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
VDR-203ENST00000546653 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
VDR-203ENST00000546653 CNTNAP1P78357 1384 aa18.61■□□□□ 0.57
VDR-203ENST00000546653 PPM1GO15355 546 aaPredicted RBP18.61■□□□□ 0.57
VDR-203ENST00000546653 POTEIP0CG38 1075 aa18.6■□□□□ 0.57
VDR-203ENST00000546653 POTEJP0CG39 1038 aa18.6■□□□□ 0.57
VDR-203ENST00000546653 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
VDR-203ENST00000546653 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
VDR-203ENST00000546653 CTCFP49711 727 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms