RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 C4AP0C0L4 1744 aa15.37■□□□□ 0.05
TMEM116-203ENST00000546537 LOC102724428A0A0B4J2F2 783 aa15.36■□□□□ 0.05
TMEM116-203ENST00000546537 GNPATO15228 680 aa15.36■□□□□ 0.05
TMEM116-203ENST00000546537 DPEP1P16444 411 aa15.36■□□□□ 0.05
TMEM116-203ENST00000546537 SIK1P57059 783 aa15.36■□□□□ 0.05
TMEM116-203ENST00000546537 RRAGCQ9HB90 399 aa15.36■□□□□ 0.05
TMEM116-203ENST00000546537 SMG6Q86US8 1419 aaKnown RBP15.35■□□□□ 0.05
TMEM116-203ENST00000546537 SMC1BQ8NDV3 1235 aa15.35■□□□□ 0.05
TMEM116-203ENST00000546537 KCNA3P22001 575 aa15.34■□□□□ 0.05
TMEM116-203ENST00000546537 ITPK1Q13572 414 aa15.34■□□□□ 0.05
TMEM116-203ENST00000546537 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
TMEM116-203ENST00000546537 PUS7Q96PZ0 661 aaKnown RBP15.34■□□□□ 0.05
TMEM116-203ENST00000546537 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
TMEM116-203ENST00000546537 CCDC87Q9NVE4 849 aa15.33■□□□□ 0.04
TMEM116-203ENST00000546537 TMF1P82094 1093 aa15.32■□□□□ 0.04
TMEM116-203ENST00000546537 NKX1-1Q15270 411 aaPredicted RBP15.32■□□□□ 0.04
TMEM116-203ENST00000546537 RNF181Q9P0P0 153 aa15.32■□□□□ 0.04
TMEM116-203ENST00000546537 ATP6V1AP38606 617 aa15.31■□□□□ 0.04
TMEM116-203ENST00000546537 TRAPPC3LQ5T215 181 aa15.31■□□□□ 0.04
TMEM116-203ENST00000546537 DCAF5Q96JK2 942 aa15.31■□□□□ 0.04
TMEM116-203ENST00000546537 INSRP06213 1382 aa15.31■□□□□ 0.04
TMEM116-203ENST00000546537 ZNF831Q5JPB2 1677 aa15.3■□□□□ 0.04
TMEM116-203ENST00000546537 PIM2Q9P1W9 311 aa15.3■□□□□ 0.04
TMEM116-203ENST00000546537 COL5A3P25940 1745 aaPredicted RBP15.29■□□□□ 0.04
TMEM116-203ENST00000546537 ASAP1Q9ULH1 1129 aa15.29■□□□□ 0.04
TMEM116-203ENST00000546537 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
TMEM116-203ENST00000546537 GYS1P13807 737 aa15.28■□□□□ 0.04
TMEM116-203ENST00000546537 HSP90AB2PQ58FF8 381 aa15.28■□□□□ 0.04
TMEM116-203ENST00000546537 TMOD3Q9NYL9 352 aa15.28■□□□□ 0.04
TMEM116-203ENST00000546537 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
TMEM116-203ENST00000546537 DALRD3Q5D0E6 543 aaKnown RBP15.27■□□□□ 0.04
TMEM116-203ENST00000546537 ARHGEF1Q92888 912 aaKnown RBP15.27■□□□□ 0.04
TMEM116-203ENST00000546537 NCAPD2Q15021 1401 aa15.26■□□□□ 0.03
TMEM116-203ENST00000546537 FLT4P35916 1363 aa15.26■□□□□ 0.03
TMEM116-203ENST00000546537 ZC3H4Q9UPT8 1303 aaKnown RBP15.26■□□□□ 0.03
TMEM116-203ENST00000546537 ADRA2BP18089 450 aa15.26■□□□□ 0.03
TMEM116-203ENST00000546537 CARD11Q9BXL7 1154 aa15.26■□□□□ 0.03
TMEM116-203ENST00000546537 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
TMEM116-203ENST00000546537 KDRP35968 1356 aa15.25■□□□□ 0.03
TMEM116-203ENST00000546537 KIF24Q5T7B8 1368 aa15.25■□□□□ 0.03
TMEM116-203ENST00000546537 FYB1O15117 783 aa15.25■□□□□ 0.03
TMEM116-203ENST00000546537 VEGFAP15692 232 aaPredicted RBP15.25■□□□□ 0.03
TMEM116-203ENST00000546537 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
TMEM116-203ENST00000546537 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
TMEM116-203ENST00000546537 KDM6AO15550 1401 aaPredicted RBP15.25■□□□□ 0.03
TMEM116-203ENST00000546537 MYH14Q7Z406 1995 aaKnown RBP15.24■□□□□ 0.03
TMEM116-203ENST00000546537 RFC4P35249 363 aa15.24■□□□□ 0.03
TMEM116-203ENST00000546537 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
TMEM116-203ENST00000546537 GGNBP2Q9H3C7 697 aa15.24■□□□□ 0.03
TMEM116-203ENST00000546537 CCDC88AQ3V6T2 1871 aa15.24■□□□□ 0.03
TMEM116-203ENST00000546537 TIAM2Q8IVF5 1701 aa15.23■□□□□ 0.03
TMEM116-203ENST00000546537 KIF20BQ96Q89 1820 aa15.23■□□□□ 0.03
TMEM116-203ENST00000546537 GLTPD2A6NH11 291 aa15.23■□□□□ 0.03
TMEM116-203ENST00000546537 SLC4A9Q96Q91 983 aa15.23■□□□□ 0.03
TMEM116-203ENST00000546537 CNTNAP4Q9C0A0 1308 aa15.22■□□□□ 0.03
TMEM116-203ENST00000546537 RPS6KA4O75676 772 aa15.22■□□□□ 0.03
TMEM116-203ENST00000546537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.03
TMEM116-203ENST00000546537 CHRNA5P30532 468 aa15.21■□□□□ 0.03
TMEM116-203ENST00000546537 PHKG2P15735 406 aa15.2■□□□□ 0.02
TMEM116-203ENST00000546537 RASSF7Q02833 373 aa15.2■□□□□ 0.02
TMEM116-203ENST00000546537 NEUROD1Q13562 356 aa15.2■□□□□ 0.02
TMEM116-203ENST00000546537 IFNL2Q8IZJ0 200 aa15.2■□□□□ 0.02
TMEM116-203ENST00000546537 PRDM10Q9NQV6 1147 aa15.2■□□□□ 0.02
TMEM116-203ENST00000546537 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
TMEM116-203ENST00000546537 TONSLQ96HA7 1378 aa15.2■□□□□ 0.02
TMEM116-203ENST00000546537 DLEC1Q9Y238 1755 aa15.19■□□□□ 0.02
TMEM116-203ENST00000546537 DDR1Q08345 913 aa15.19■□□□□ 0.02
TMEM116-203ENST00000546537 ANKRD26Q9UPS8 1709 aa15.19■□□□□ 0.02
TMEM116-203ENST00000546537 POTECB2RU33 542 aa15.18■□□□□ 0.02
TMEM116-203ENST00000546537 FOXN1O15353 648 aa15.18■□□□□ 0.02
TMEM116-203ENST00000546537 LMNB1P20700 586 aa15.18■□□□□ 0.02
TMEM116-203ENST00000546537 TESK2Q96S53 571 aa15.18■□□□□ 0.02
TMEM116-203ENST00000546537 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
TMEM116-203ENST00000546537 CREBZFQ9NS37 354 aa15.18■□□□□ 0.02
TMEM116-203ENST00000546537 FKBP8Q14318 412 aa15.17■□□□□ 0.02
TMEM116-203ENST00000546537 MKRN1Q9UHC7 482 aaKnown RBP15.17■□□□□ 0.02
TMEM116-203ENST00000546537 USP42Q9H9J4 1324 aaKnown RBP15.17■□□□□ 0.02
TMEM116-203ENST00000546537 ADAMTS7Q9UKP4 1686 aa15.16■□□□□ 0.02
TMEM116-203ENST00000546537 AFDNP55196 1824 aaKnown RBP15.16■□□□□ 0.02
TMEM116-203ENST00000546537 SRP68Q9UHB9 627 aaKnown RBP15.16■□□□□ 0.02
TMEM116-203ENST00000546537 EMILIN1Q9Y6C2 1016 aa15.16■□□□□ 0.02
TMEM116-203ENST00000546537 POLRMTO00411 1230 aaKnown RBP15.15■□□□□ 0.02
TMEM116-203ENST00000546537 DICER1Q9UPY3 1922 aaKnown RBP15.15■□□□□ 0.02
TMEM116-203ENST00000546537 ERVV-2B6SEH9 535 aa15.14■□□□□ 0.01
TMEM116-203ENST00000546537 TM4SF1P30408 202 aa15.14■□□□□ 0.01
TMEM116-203ENST00000546537 EYA1Q99502 592 aa15.14■□□□□ 0.01
TMEM116-203ENST00000546537 VIRMAQ69YN4 1812 aaKnown RBP15.14■□□□□ 0.01
TMEM116-203ENST00000546537 NRXN2Q9P2S2 1712 aa15.14■□□□□ 0.01
TMEM116-203ENST00000546537 CNTNAP1P78357 1384 aa15.13■□□□□ 0.01
TMEM116-203ENST00000546537 SLC24A1O60721 1099 aa15.13■□□□□ 0.01
TMEM116-203ENST00000546537 CTCFP49711 727 aaPredicted RBP15.13■□□□□ 0.01
TMEM116-203ENST00000546537 TJP1Q07157 1748 aa15.13■□□□□ 0.01
TMEM116-203ENST00000546537 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
TMEM116-203ENST00000546537 ST20-MTHFSA0A0A6YYL1 179 aa15.12■□□□□ 0.01
TMEM116-203ENST00000546537 CHADLQ6NUI6 762 aa15.12■□□□□ 0.01
TMEM116-203ENST00000546537 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
TMEM116-203ENST00000546537 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
TMEM116-203ENST00000546537 CRKLP46109 303 aaKnown RBP15.11■□□□□ 0.01
TMEM116-203ENST00000546537 NFKBIEO00221 500 aa15.1■□□□□ 0.01
TMEM116-203ENST00000546537 PPM1GO15355 546 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms