RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 SSFA2P28290 1259 aa25.54■■□□□ 1.68
CHPT1-202ENST00000546490 ZNF530Q6P9A1 599 aaPredicted RBP25.54■■□□□ 1.68
CHPT1-202ENST00000546490 PELP1Q8IZL8 1130 aaKnown RBP25.54■■□□□ 1.68
CHPT1-202ENST00000546490 DCAF5Q96JK2 942 aa25.54■■□□□ 1.68
CHPT1-202ENST00000546490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.53■■□□□ 1.68
CHPT1-202ENST00000546490 ERVV-2B6SEH9 535 aa25.53■■□□□ 1.68
CHPT1-202ENST00000546490 ATP6V1AP38606 617 aa25.53■■□□□ 1.68
CHPT1-202ENST00000546490 AMER1Q5JTC6 1135 aaPredicted RBP25.53■■□□□ 1.68
CHPT1-202ENST00000546490 ATG3Q9NT62 314 aa25.53■■□□□ 1.68
CHPT1-202ENST00000546490 AMIGO3Q86WK7 504 aa25.52■■□□□ 1.68
CHPT1-202ENST00000546490 AEBP1Q8IUX7 1158 aa25.52■■□□□ 1.68
CHPT1-202ENST00000546490 ITPK1Q13572 414 aa25.51■■□□□ 1.67
CHPT1-202ENST00000546490 C1orf141Q5JVX7 400 aa25.5■■□□□ 1.67
CHPT1-202ENST00000546490 ZNF784Q8NCA9 323 aaPredicted RBP25.5■■□□□ 1.67
CHPT1-202ENST00000546490 CICQ96RK0 1608 aaPredicted RBP25.5■■□□□ 1.67
CHPT1-202ENST00000546490 C4AP0C0L4 1744 aa25.49■■□□□ 1.67
CHPT1-202ENST00000546490 GNPATO15228 680 aa25.49■■□□□ 1.67
CHPT1-202ENST00000546490 SULT6B1Q6IMI4 303 aa25.49■■□□□ 1.67
CHPT1-202ENST00000546490 CD2APQ9Y5K6 639 aa25.48■■□□□ 1.67
CHPT1-202ENST00000546490 IL13P35225 146 aa25.47■■□□□ 1.67
CHPT1-202ENST00000546490 CABP4P57796 275 aa25.47■■□□□ 1.67
CHPT1-202ENST00000546490 TJP1Q07157 1748 aa25.46■■□□□ 1.67
CHPT1-202ENST00000546490 MTHFSP49914 203 aa25.45■■□□□ 1.66
CHPT1-202ENST00000546490 SMIM5Q71RC9 77 aa25.45■■□□□ 1.66
CHPT1-202ENST00000546490 RBM42Q9BTD8 480 aaKnown RBP25.45■■□□□ 1.66
CHPT1-202ENST00000546490 MYH14Q7Z406 1995 aaKnown RBP25.45■■□□□ 1.66
CHPT1-202ENST00000546490 KIF13BQ9NQT8 1826 aa25.44■■□□□ 1.66
CHPT1-202ENST00000546490 GRIN3BO60391 1043 aa25.43■■□□□ 1.66
CHPT1-202ENST00000546490 YBX3P16989 372 aaKnown RBP eCLIP25.42■■□□□ 1.66
CHPT1-202ENST00000546490 RTCBQ9Y3I0 505 aaKnown RBP25.42■■□□□ 1.66
CHPT1-202ENST00000546490 MRC1P22897 1456 aa25.41■■□□□ 1.66
CHPT1-202ENST00000546490 CNTNAP4Q9C0A0 1308 aa25.41■■□□□ 1.66
CHPT1-202ENST00000546490 SLC4A9Q96Q91 983 aa25.41■■□□□ 1.66
CHPT1-202ENST00000546490 ADAMTS7Q9UKP4 1686 aa25.41■■□□□ 1.66
CHPT1-202ENST00000546490 PER1O15534 1290 aaPredicted RBP25.4■■□□□ 1.66
CHPT1-202ENST00000546490 CC2D1BQ5T0F9 858 aaKnown RBP25.4■■□□□ 1.66
CHPT1-202ENST00000546490 NPC1L1Q9UHC9 1359 aa25.39■■□□□ 1.65
CHPT1-202ENST00000546490 KIAA1551Q9HCM1 1747 aa25.38■■□□□ 1.65
CHPT1-202ENST00000546490 ADRA2BP18089 450 aa25.38■■□□□ 1.65
CHPT1-202ENST00000546490 AKAP4Q5JQC9 854 aa25.38■■□□□ 1.65
CHPT1-202ENST00000546490 RC3H1Q5TC82 1133 aaKnown RBP25.38■■□□□ 1.65
CHPT1-202ENST00000546490 COL3A1P02461 1466 aaPredicted RBP25.37■■□□□ 1.65
CHPT1-202ENST00000546490 TRAPPC3LQ5T215 181 aa25.37■■□□□ 1.65
CHPT1-202ENST00000546490 NFATC2IPQ8NCF5 419 aa25.37■■□□□ 1.65
CHPT1-202ENST00000546490 N4BP2Q86UW6 1770 aaPredicted RBP25.36■■□□□ 1.65
CHPT1-202ENST00000546490 DIAPH1O60610 1272 aaKnown RBP25.35■■□□□ 1.65
CHPT1-202ENST00000546490 PTCD1O75127 700 aaKnown RBP25.35■■□□□ 1.65
CHPT1-202ENST00000546490 HMOX1P09601 288 aa25.35■■□□□ 1.65
CHPT1-202ENST00000546490 UBR2Q8IWV8 1755 aa25.34■■□□□ 1.65
CHPT1-202ENST00000546490 MMP10P09238 476 aa25.34■■□□□ 1.65
CHPT1-202ENST00000546490 RPS6KA4O75676 772 aa25.33■■□□□ 1.65
CHPT1-202ENST00000546490 NLGN1Q8N2Q7 840 aa25.32■■□□□ 1.64
CHPT1-202ENST00000546490 SLC52A2Q9HAB3 445 aa25.32■■□□□ 1.64
CHPT1-202ENST00000546490 RFC4P35249 363 aa25.31■■□□□ 1.64
CHPT1-202ENST00000546490 ARHGEF1Q92888 912 aaKnown RBP25.31■■□□□ 1.64
CHPT1-202ENST00000546490 BRCA1P38398 1863 aaKnown RBP25.31■■□□□ 1.64
CHPT1-202ENST00000546490 C10orf71Q711Q0 1435 aa25.3■■□□□ 1.64
CHPT1-202ENST00000546490 CRKLP46109 303 aaKnown RBP25.3■■□□□ 1.64
CHPT1-202ENST00000546490 PXDNLA1KZ92 1463 aa25.29■■□□□ 1.64
CHPT1-202ENST00000546490 KCPQ6ZWJ8 1503 aa25.29■■□□□ 1.64
CHPT1-202ENST00000546490 SIPA1L3O60292 1781 aaPredicted RBP25.28■■□□□ 1.64
CHPT1-202ENST00000546490 RNMTO43148 476 aaKnown RBP25.28■■□□□ 1.64
CHPT1-202ENST00000546490 GYS1P13807 737 aa25.28■■□□□ 1.64
CHPT1-202ENST00000546490 CNGB1Q14028 1251 aaPredicted RBP25.28■■□□□ 1.64
CHPT1-202ENST00000546490 MTHFSDQ2M296 383 aaKnown RBP25.27■■□□□ 1.64
CHPT1-202ENST00000546490 LGR6Q9HBX8 967 aa25.27■■□□□ 1.64
CHPT1-202ENST00000546490 GIGYF1O75420 1035 aaPredicted RBP25.26■■□□□ 1.63
CHPT1-202ENST00000546490 WWC3Q9ULE0 1092 aa25.26■■□□□ 1.63
CHPT1-202ENST00000546490 ATP10DQ9P241 1426 aa25.25■■□□□ 1.63
CHPT1-202ENST00000546490 USP42Q9H9J4 1324 aaKnown RBP25.24■■□□□ 1.63
CHPT1-202ENST00000546490 U2SURPO15042 1029 aaKnown RBP25.24■■□□□ 1.63
CHPT1-202ENST00000546490 CCDC87Q9NVE4 849 aa25.24■■□□□ 1.63
CHPT1-202ENST00000546490 ARFGEF1Q9Y6D6 1849 aa25.23■■□□□ 1.63
CHPT1-202ENST00000546490 ADCY9O60503 1353 aa25.23■■□□□ 1.63
CHPT1-202ENST00000546490 C1QTNF8P60827 252 aa25.23■■□□□ 1.63
CHPT1-202ENST00000546490 PARP3Q9Y6F1 533 aa25.23■■□□□ 1.63
CHPT1-202ENST00000546490 TGFB2P61812 414 aa25.22■■□□□ 1.63
CHPT1-202ENST00000546490 DNAJC10Q8IXB1 793 aa25.22■■□□□ 1.63
CHPT1-202ENST00000546490 SLC39A6Q13433 755 aa25.2■■□□□ 1.62
CHPT1-202ENST00000546490 INTS5Q6P9B9 1019 aaKnown RBP25.2■■□□□ 1.62
CHPT1-202ENST00000546490 GAS2L2Q8NHY3 880 aa25.2■■□□□ 1.62
CHPT1-202ENST00000546490 AFDNP55196 1824 aaKnown RBP25.19■■□□□ 1.62
CHPT1-202ENST00000546490 CFAP53Q96M91 514 aa25.19■■□□□ 1.62
CHPT1-202ENST00000546490 SRP68Q9UHB9 627 aaKnown RBP25.19■■□□□ 1.62
CHPT1-202ENST00000546490 COL15A1P39059 1388 aa25.18■■□□□ 1.62
CHPT1-202ENST00000546490 SOS1Q07889 1333 aaPredicted RBP25.17■■□□□ 1.62
CHPT1-202ENST00000546490 VSIG10Q8N0Z9 540 aa25.17■■□□□ 1.62
CHPT1-202ENST00000546490 SENP3-EIF4A1A0A087X0R7 540 aa25.16■■□□□ 1.62
CHPT1-202ENST00000546490 GNAT3A8MTJ3 354 aa25.16■■□□□ 1.62
CHPT1-202ENST00000546490 CYP19A1P11511 503 aaPredicted RBP25.16■■□□□ 1.62
CHPT1-202ENST00000546490 FKBP8Q14318 412 aa25.16■■□□□ 1.62
CHPT1-202ENST00000546490 TTC5Q8N0Z6 440 aa25.16■■□□□ 1.62
CHPT1-202ENST00000546490 NRXN2Q9P2S2 1712 aa25.15■■□□□ 1.62
CHPT1-202ENST00000546490 A0A0G2JLW4 131 aa25.15■■□□□ 1.62
CHPT1-202ENST00000546490 ZPR1O75312 459 aa25.15■■□□□ 1.62
CHPT1-202ENST00000546490 TEFQ10587 303 aa25.15■■□□□ 1.62
CHPT1-202ENST00000546490 SCN7AQ01118 1682 aa25.15■■□□□ 1.62
CHPT1-202ENST00000546490 GPBP1L1Q9HC44 474 aaPredicted RBP25.14■■□□□ 1.62
CHPT1-202ENST00000546490 BCS1LQ9Y276 419 aa25.14■■□□□ 1.62
CHPT1-202ENST00000546490 DLEC1Q9Y238 1755 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms