RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 WAPLQ7Z5K2 1190 aa8.93□□□□□ -0.98
PRKDC-211ENST00000546304 SULF1Q8IWU6 871 aa8.93□□□□□ -0.98
PRKDC-211ENST00000546304 POGKQ9P215 609 aa8.93□□□□□ -0.98
PRKDC-211ENST00000546304 MST1RQ04912 1400 aa8.93□□□□□ -0.98
PRKDC-211ENST00000546304 ATP7BP35670 1465 aa8.93□□□□□ -0.98
PRKDC-211ENST00000546304 RGS20O76081 388 aa8.92□□□□□ -0.98
PRKDC-211ENST00000546304 PCDHB3Q9Y5E6 796 aa8.92□□□□□ -0.98
PRKDC-211ENST00000546304 NHSL1Q5SYE7 1610 aa8.91□□□□□ -0.98
PRKDC-211ENST00000546304 ANKARQ7Z5J8 1434 aa8.91□□□□□ -0.98
PRKDC-211ENST00000546304 ZEB1P37275 1124 aaPredicted RBP8.91□□□□□ -0.98
PRKDC-211ENST00000546304 C19orf44Q9H6X5 657 aa8.91□□□□□ -0.98
PRKDC-211ENST00000546304 MYOM1P52179 1685 aa8.91□□□□□ -0.98
PRKDC-211ENST00000546304 C1orf167Q5SNV9 1468 aa8.9□□□□□ -0.98
PRKDC-211ENST00000546304 DDX11L8A8MPP1 907 aa8.9□□□□□ -0.98
PRKDC-211ENST00000546304 ATF3P18847 181 aa8.9□□□□□ -0.98
PRKDC-211ENST00000546304 KRI1Q8N9T8 703 aaKnown RBP8.9□□□□□ -0.98
PRKDC-211ENST00000546304 ZNF516Q92618 1163 aa8.9□□□□□ -0.98
PRKDC-211ENST00000546304 HIRIP3Q9BW71 556 aaPredicted RBP8.9□□□□□ -0.98
PRKDC-211ENST00000546304 ZPR1O75312 459 aa8.89□□□□□ -0.99
PRKDC-211ENST00000546304 COPS2P61201 443 aa8.89□□□□□ -0.99
PRKDC-211ENST00000546304 BLOC1S3Q6QNY0 202 aa8.89□□□□□ -0.99
PRKDC-211ENST00000546304 RDH13Q8NBN7 331 aa8.89□□□□□ -0.99
PRKDC-211ENST00000546304 AHDC1Q5TGY3 1603 aaPredicted RBP8.89□□□□□ -0.99
PRKDC-211ENST00000546304 DISP3Q9P2K9 1392 aa8.88□□□□□ -0.99
PRKDC-211ENST00000546304 ST20-MTHFSA0A0A6YYL1 179 aa8.88□□□□□ -0.99
PRKDC-211ENST00000546304 GCGRP47871 477 aa8.88□□□□□ -0.99
PRKDC-211ENST00000546304 EIF4G2P78344 907 aaKnown RBP eCLIP8.88□□□□□ -0.99
PRKDC-211ENST00000546304 MDM2Q00987 491 aaPredicted RBP8.88□□□□□ -0.99
PRKDC-211ENST00000546304 TESK2Q96S53 571 aa8.88□□□□□ -0.99
PRKDC-211ENST00000546304 TMUB1Q9BVT8 246 aa8.88□□□□□ -0.99
PRKDC-211ENST00000546304 AKAP12Q02952 1782 aa8.88□□□□□ -0.99
PRKDC-211ENST00000546304 PHLPP1O60346 1717 aa8.88□□□□□ -0.99
PRKDC-211ENST00000546304 MON2Q7Z3U7 1717 aa8.88□□□□□ -0.99
PRKDC-211ENST00000546304 UBAP1LF5GYI3 381 aa8.87□□□□□ -0.99
PRKDC-211ENST00000546304 WASLO00401 505 aaPredicted RBP8.87□□□□□ -0.99
PRKDC-211ENST00000546304 HSPA5P11021 654 aaKnown RBP8.87□□□□□ -0.99
PRKDC-211ENST00000546304 CLCN1P35523 988 aa8.87□□□□□ -0.99
PRKDC-211ENST00000546304 COL16A1Q07092 1604 aaPredicted RBP8.87□□□□□ -0.99
PRKDC-211ENST00000546304 ATAD2Q6PL18 1390 aa8.86□□□□□ -0.99
PRKDC-211ENST00000546304 NRKQ7Z2Y5 1582 aa8.86□□□□□ -0.99
PRKDC-211ENST00000546304 EVC2Q86UK5 1308 aa8.86□□□□□ -0.99
PRKDC-211ENST00000546304 TOM1O60784 492 aa8.86□□□□□ -0.99
PRKDC-211ENST00000546304 CD46P15529 392 aa8.86□□□□□ -0.99
PRKDC-211ENST00000546304 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
PRKDC-211ENST00000546304 TRPM3Q9HCF6 1732 aaPredicted RBP8.85□□□□□ -0.99
PRKDC-211ENST00000546304 PRR36Q9H6K5 1346 aa8.85□□□□□ -0.99
PRKDC-211ENST00000546304 NR1I2O75469 434 aa8.85□□□□□ -0.99
PRKDC-211ENST00000546304 SRPK2P78362 688 aaKnown RBP8.85□□□□□ -0.99
PRKDC-211ENST00000546304 AMHR2Q16671 573 aa8.85□□□□□ -0.99
PRKDC-211ENST00000546304 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
PRKDC-211ENST00000546304 PPIP5K1Q6PFW1 1433 aa8.85□□□□□ -0.99
PRKDC-211ENST00000546304 PXDNQ92626 1479 aa8.84□□□□□ -0.99
PRKDC-211ENST00000546304 CDK19Q9BWU1 502 aa8.84□□□□□ -0.99
PRKDC-211ENST00000546304 SLAIN2Q9P270 581 aa8.84□□□□□ -0.99
PRKDC-211ENST00000546304 NINLQ9Y2I6 1382 aa8.84□□□□□ -0.99
PRKDC-211ENST00000546304 PIP4K2BP78356 416 aa8.83□□□□□ -1
PRKDC-211ENST00000546304 TMF1P82094 1093 aa8.83□□□□□ -1
PRKDC-211ENST00000546304 FUT2Q10981 343 aa8.83□□□□□ -1
PRKDC-211ENST00000546304 BRINP3Q76B58 766 aa8.83□□□□□ -1
PRKDC-211ENST00000546304 FAM217BQ9NTX9 383 aaPredicted RBP8.83□□□□□ -1
PRKDC-211ENST00000546304 ALS2Q96Q42 1657 aa8.83□□□□□ -1
PRKDC-211ENST00000546304 ABCA3Q99758 1704 aa8.83□□□□□ -1
PRKDC-211ENST00000546304 SHPRHQ149N8 1683 aa8.82□□□□□ -1
PRKDC-211ENST00000546304 ATP6V1AP38606 617 aa8.82□□□□□ -1
PRKDC-211ENST00000546304 MORN1Q5T089 497 aa8.82□□□□□ -1
PRKDC-211ENST00000546304 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
PRKDC-211ENST00000546304 SCUBE3Q8IX30 993 aa8.82□□□□□ -1
PRKDC-211ENST00000546304 NUDT16Q96DE0 195 aaKnown RBP8.82□□□□□ -1
PRKDC-211ENST00000546304 AK7Q96M32 723 aa8.82□□□□□ -1
PRKDC-211ENST00000546304 KIF20BQ96Q89 1820 aa8.82□□□□□ -1
PRKDC-211ENST00000546304 CDCA8Q53HL2 280 aa8.81□□□□□ -1
PRKDC-211ENST00000546304 ESCO1Q5FWF5 840 aa8.81□□□□□ -1
PRKDC-211ENST00000546304 FBXO41Q8TF61 875 aa8.81□□□□□ -1
PRKDC-211ENST00000546304 ORAI2Q96SN7 254 aa8.81□□□□□ -1
PRKDC-211ENST00000546304 POLR3AO14802 1390 aaPredicted RBP8.81□□□□□ -1
PRKDC-211ENST00000546304 CD163L1Q9NR16 1453 aa8.81□□□□□ -1
PRKDC-211ENST00000546304 PIK3C2AO00443 1686 aa8.81□□□□□ -1
PRKDC-211ENST00000546304 NPHP3Q7Z494 1330 aa8.8□□□□□ -1
PRKDC-211ENST00000546304 COL22A1Q8NFW1 1626 aaPredicted RBP8.8□□□□□ -1
PRKDC-211ENST00000546304 CRYBG1Q9Y4K1 1723 aa8.8□□□□□ -1
PRKDC-211ENST00000546304 GGCXP38435 758 aa8.8□□□□□ -1
PRKDC-211ENST00000546304 PUS10Q3MIT2 529 aaKnown RBP8.8□□□□□ -1
PRKDC-211ENST00000546304 PUS7Q96PZ0 661 aaKnown RBP8.8□□□□□ -1
PRKDC-211ENST00000546304 REPIN1Q9BWE0 567 aaKnown RBP8.8□□□□□ -1
PRKDC-211ENST00000546304 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.8□□□□□ -1
PRKDC-211ENST00000546304 MED1Q15648 1581 aaPredicted RBP8.8□□□□□ -1
PRKDC-211ENST00000546304 USP54Q70EL1 1684 aa8.8□□□□□ -1
PRKDC-211ENST00000546304 MARF1Q9Y4F3 1742 aaKnown RBP8.8□□□□□ -1
PRKDC-211ENST00000546304 USP6P35125 1406 aa8.8□□□□□ -1
PRKDC-211ENST00000546304 TNS3Q68CZ2 1445 aa8.8□□□□□ -1
PRKDC-211ENST00000546304 A0A1W2PP64 1363 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 CCDC7Q96M83 1385 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 TRIM66O15016 1216 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 TLL1O43897 1013 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 ADH1BP00325 375 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 USP46P62068 366 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 GRIPAP1Q4V328 841 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 ANKRD26Q9UPS8 1709 aa8.79□□□□□ -1
PRKDC-211ENST00000546304 PHRF1Q9P1Y6 1649 aaKnown RBP8.79□□□□□ -1
PRKDC-211ENST00000546304 CPSF1Q10570 1443 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms