RNA–Protein interactions for RNA: ENST00000546272.5

C12orf43-209, Transcript of chromosome 12 open reading frame 43, humanhuman

TSL 2

Gene C12orf43, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-209ENST00000546272 TONSLQ96HA7 1378 aa25.16■■□□□ 1.62
C12orf43-209ENST00000546272 SMG6Q86US8 1419 aaKnown RBP25.16■■□□□ 1.62
C12orf43-209ENST00000546272 LOC102724428A0A0B4J2F2 783 aa25.15■■□□□ 1.62
C12orf43-209ENST00000546272 SIK1P57059 783 aa25.15■■□□□ 1.62
C12orf43-209ENST00000546272 SMC1BQ8NDV3 1235 aa25.15■■□□□ 1.62
C12orf43-209ENST00000546272 TNRC6CQ9HCJ0 1690 aaKnown RBP25.15■■□□□ 1.62
C12orf43-209ENST00000546272 CYP27B1O15528 508 aa25.14■■□□□ 1.62
C12orf43-209ENST00000546272 DPEP1P16444 411 aa25.14■■□□□ 1.62
C12orf43-209ENST00000546272 PIGBQ92521 554 aa25.14■■□□□ 1.62
C12orf43-209ENST00000546272 RRAGCQ9HB90 399 aa25.14■■□□□ 1.62
C12orf43-209ENST00000546272 SLC34A2O95436 690 aa25.13■■□□□ 1.61
C12orf43-209ENST00000546272 NLGN1Q8N2Q7 840 aa25.12■■□□□ 1.61
C12orf43-209ENST00000546272 CCDC87Q9NVE4 849 aa25.12■■□□□ 1.61
C12orf43-209ENST00000546272 TMF1P82094 1093 aa25.1■■□□□ 1.61
C12orf43-209ENST00000546272 PUS7Q96PZ0 661 aaKnown RBP25.1■■□□□ 1.61
C12orf43-209ENST00000546272 ITPK1Q13572 414 aa25.09■■□□□ 1.61
C12orf43-209ENST00000546272 RRS1Q15050 365 aaKnown RBP25.09■■□□□ 1.61
C12orf43-209ENST00000546272 RNF181Q9P0P0 153 aa25.09■■□□□ 1.61
C12orf43-209ENST00000546272 C4AP0C0L4 1744 aa25.09■■□□□ 1.61
C12orf43-209ENST00000546272 ATP6V1AP38606 617 aa25.08■■□□□ 1.6
C12orf43-209ENST00000546272 CLSPNQ9HAW4 1339 aa25.07■■□□□ 1.6
C12orf43-209ENST00000546272 KCNA3P22001 575 aa25.07■■□□□ 1.6
C12orf43-209ENST00000546272 TRAPPC3LQ5T215 181 aa25.07■■□□□ 1.6
C12orf43-209ENST00000546272 SBF1O95248 1867 aa25.06■■□□□ 1.6
C12orf43-209ENST00000546272 NKX1-1Q15270 411 aaPredicted RBP25.06■■□□□ 1.6
C12orf43-209ENST00000546272 DCAF5Q96JK2 942 aa25.06■■□□□ 1.6
C12orf43-209ENST00000546272 PIM2Q9P1W9 311 aa25.06■■□□□ 1.6
C12orf43-209ENST00000546272 RTCBQ9Y3I0 505 aaKnown RBP25.05■■□□□ 1.6
C12orf43-209ENST00000546272 PARP3Q9Y6F1 533 aa25.05■■□□□ 1.6
C12orf43-209ENST00000546272 CCER1Q8TC90 406 aaPredicted RBP25.04■■□□□ 1.6
C12orf43-209ENST00000546272 TMOD3Q9NYL9 352 aa25.04■■□□□ 1.6
C12orf43-209ENST00000546272 ASAP1Q9ULH1 1129 aa25.04■■□□□ 1.6
C12orf43-209ENST00000546272 INSRP06213 1382 aa25.04■■□□□ 1.6
C12orf43-209ENST00000546272 DALRD3Q5D0E6 543 aaKnown RBP25.02■■□□□ 1.6
C12orf43-209ENST00000546272 ADRA2BP18089 450 aa25.01■■□□□ 1.59
C12orf43-209ENST00000546272 HSP90AB2PQ58FF8 381 aa25.01■■□□□ 1.59
C12orf43-209ENST00000546272 CARD11Q9BXL7 1154 aa25.01■■□□□ 1.59
C12orf43-209ENST00000546272 GYS1P13807 737 aa25■■□□□ 1.59
C12orf43-209ENST00000546272 ZC3H4Q9UPT8 1303 aaKnown RBP24.99■■□□□ 1.59
C12orf43-209ENST00000546272 ARHGEF1Q92888 912 aaKnown RBP24.99■■□□□ 1.59
C12orf43-209ENST00000546272 SPG7Q9UQ90 795 aa24.99■■□□□ 1.59
C12orf43-209ENST00000546272 FLT4P35916 1363 aa24.98■■□□□ 1.59
C12orf43-209ENST00000546272 VEGFAP15692 232 aaPredicted RBP24.97■■□□□ 1.59
C12orf43-209ENST00000546272 RFC4P35249 363 aa24.97■■□□□ 1.59
C12orf43-209ENST00000546272 KIF24Q5T7B8 1368 aa24.97■■□□□ 1.59
C12orf43-209ENST00000546272 ATG3Q9NT62 314 aa24.96■■□□□ 1.59
C12orf43-209ENST00000546272 RC3H1Q5TC82 1133 aaKnown RBP24.95■■□□□ 1.58
C12orf43-209ENST00000546272 GGNBP2Q9H3C7 697 aa24.95■■□□□ 1.58
C12orf43-209ENST00000546272 ZNF831Q5JPB2 1677 aa24.95■■□□□ 1.58
C12orf43-209ENST00000546272 FYB1O15117 783 aa24.94■■□□□ 1.58
C12orf43-209ENST00000546272 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
C12orf43-209ENST00000546272 KDRP35968 1356 aa24.93■■□□□ 1.58
C12orf43-209ENST00000546272 GLTPD2A6NH11 291 aa24.92■■□□□ 1.58
C12orf43-209ENST00000546272 RPS6KA4O75676 772 aa24.92■■□□□ 1.58
C12orf43-209ENST00000546272 NCAPD2Q15021 1401 aa24.92■■□□□ 1.58
C12orf43-209ENST00000546272 COL5A3P25940 1745 aaPredicted RBP24.91■■□□□ 1.58
C12orf43-209ENST00000546272 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.91■■□□□ 1.58
C12orf43-209ENST00000546272 CNTNAP4Q9C0A0 1308 aa24.91■■□□□ 1.58
C12orf43-209ENST00000546272 KDM6AO15550 1401 aaPredicted RBP24.91■■□□□ 1.58
C12orf43-209ENST00000546272 IFNL2Q8IZJ0 200 aa24.89■■□□□ 1.58
C12orf43-209ENST00000546272 CHRNA5P30532 468 aa24.88■■□□□ 1.57
C12orf43-209ENST00000546272 SLC4A9Q96Q91 983 aa24.88■■□□□ 1.57
C12orf43-209ENST00000546272 RBM42Q9BTD8 480 aaKnown RBP24.88■■□□□ 1.57
C12orf43-209ENST00000546272 PHKG2P15735 406 aa24.87■■□□□ 1.57
C12orf43-209ENST00000546272 LMNB1P20700 586 aa24.87■■□□□ 1.57
C12orf43-209ENST00000546272 RASSF7Q02833 373 aa24.87■■□□□ 1.57
C12orf43-209ENST00000546272 PRDM10Q9NQV6 1147 aa24.87■■□□□ 1.57
C12orf43-209ENST00000546272 MYH14Q7Z406 1995 aaKnown RBP24.87■■□□□ 1.57
C12orf43-209ENST00000546272 PCDH10Q9P2E7 1040 aa24.86■■□□□ 1.57
C12orf43-209ENST00000546272 FOXN1O15353 648 aa24.85■■□□□ 1.57
C12orf43-209ENST00000546272 CREBZFQ9NS37 354 aa24.85■■□□□ 1.57
C12orf43-209ENST00000546272 CCDC88AQ3V6T2 1871 aa24.84■■□□□ 1.57
C12orf43-209ENST00000546272 TIAM2Q8IVF5 1701 aa24.84■■□□□ 1.57
C12orf43-209ENST00000546272 DDR1Q08345 913 aa24.84■■□□□ 1.57
C12orf43-209ENST00000546272 MKRN1Q9UHC7 482 aaKnown RBP24.84■■□□□ 1.57
C12orf43-209ENST00000546272 KIF20BQ96Q89 1820 aa24.83■■□□□ 1.57
C12orf43-209ENST00000546272 SLC24A1O60721 1099 aa24.83■■□□□ 1.56
C12orf43-209ENST00000546272 FKBP8Q14318 412 aa24.83■■□□□ 1.56
C12orf43-209ENST00000546272 TESK2Q96S53 571 aa24.83■■□□□ 1.56
C12orf43-209ENST00000546272 SRP68Q9UHB9 627 aaKnown RBP24.81■■□□□ 1.56
C12orf43-209ENST00000546272 EMILIN1Q9Y6C2 1016 aa24.81■■□□□ 1.56
C12orf43-209ENST00000546272 USP42Q9H9J4 1324 aaKnown RBP24.81■■□□□ 1.56
C12orf43-209ENST00000546272 POTECB2RU33 542 aa24.8■■□□□ 1.56
C12orf43-209ENST00000546272 ERVV-2B6SEH9 535 aa24.8■■□□□ 1.56
C12orf43-209ENST00000546272 DPY19L2Q6NUT2 758 aa24.79■■□□□ 1.56
C12orf43-209ENST00000546272 EYA1Q99502 592 aa24.79■■□□□ 1.56
C12orf43-209ENST00000546272 POLRMTO00411 1230 aaKnown RBP24.78■■□□□ 1.56
C12orf43-209ENST00000546272 CTCFP49711 727 aaPredicted RBP24.78■■□□□ 1.56
C12orf43-209ENST00000546272 FAM161AQ3B820 660 aa24.77■■□□□ 1.56
C12orf43-209ENST00000546272 AIDAQ96BJ3 306 aa24.77■■□□□ 1.56
C12orf43-209ENST00000546272 ST20-MTHFSA0A0A6YYL1 179 aa24.76■■□□□ 1.55
C12orf43-209ENST00000546272 PPM1GO15355 546 aaPredicted RBP24.76■■□□□ 1.55
C12orf43-209ENST00000546272 TM4SF1P30408 202 aa24.76■■□□□ 1.55
C12orf43-209ENST00000546272 CNTNAP1P78357 1384 aa24.75■■□□□ 1.55
C12orf43-209ENST00000546272 CRKLP46109 303 aaKnown RBP24.75■■□□□ 1.55
C12orf43-209ENST00000546272 CHADLQ6NUI6 762 aa24.75■■□□□ 1.55
C12orf43-209ENST00000546272 DLEC1Q9Y238 1755 aa24.75■■□□□ 1.55
C12orf43-209ENST00000546272 ANKRD26Q9UPS8 1709 aa24.74■■□□□ 1.55
C12orf43-209ENST00000546272 WASHC2AQ641Q2 1341 aa24.74■■□□□ 1.55
C12orf43-209ENST00000546272 HSP90AB1P08238 724 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms