RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 B4GALNT3Q6L9W6 998 aa24.87■■□□□ 1.57
SKP2-208ENST00000546211 ATF7IPQ6VMQ6 1270 aa24.87■■□□□ 1.57
SKP2-208ENST00000546211 FTSJ3Q8IY81 847 aaKnown RBP24.87■■□□□ 1.57
SKP2-208ENST00000546211 DZIP1LQ8IYY4 767 aaKnown RBP24.86■■□□□ 1.57
SKP2-208ENST00000546211 SLC52A2Q9HAB3 445 aa24.86■■□□□ 1.57
SKP2-208ENST00000546211 SLIT2O94813 1529 aa24.86■■□□□ 1.57
SKP2-208ENST00000546211 TCERG1O14776 1098 aaKnown RBP24.85■■□□□ 1.57
SKP2-208ENST00000546211 SIPA1L3O60292 1781 aaPredicted RBP24.85■■□□□ 1.57
SKP2-208ENST00000546211 CLUAP1Q96AJ1 413 aa24.84■■□□□ 1.57
SKP2-208ENST00000546211 DISP2A7MBM2 1401 aa24.84■■□□□ 1.57
SKP2-208ENST00000546211 TRIM27P14373 513 aa24.84■■□□□ 1.57
SKP2-208ENST00000546211 HSPA1LP34931 641 aa24.84■■□□□ 1.57
SKP2-208ENST00000546211 EIF4A1P60842 406 aaKnown RBP24.84■■□□□ 1.57
SKP2-208ENST00000546211 ARHGAP45Q92619 1136 aa24.84■■□□□ 1.57
SKP2-208ENST00000546211 TNNQ9UQP3 1299 aa24.84■■□□□ 1.57
SKP2-208ENST00000546211 COG6Q9Y2V7 657 aa24.84■■□□□ 1.57
SKP2-208ENST00000546211 DDX54Q8TDD1 881 aaKnown RBP24.83■■□□□ 1.57
SKP2-208ENST00000546211 THRAP3Q9Y2W1 955 aaKnown RBP24.83■■□□□ 1.57
SKP2-208ENST00000546211 MRC1P22897 1456 aa24.83■■□□□ 1.57
SKP2-208ENST00000546211 RLBP1P12271 317 aa24.82■■□□□ 1.56
SKP2-208ENST00000546211 NKX1-1Q15270 411 aaPredicted RBP24.81■■□□□ 1.56
SKP2-208ENST00000546211 NGLY1Q96IV0 654 aa24.81■■□□□ 1.56
SKP2-208ENST00000546211 C8orf37Q96NL8 207 aa24.81■■□□□ 1.56
SKP2-208ENST00000546211 CDCA7Q9BWT1 371 aaPredicted RBP24.81■■□□□ 1.56
SKP2-208ENST00000546211 CHMP4AQ9BY43 222 aa24.81■■□□□ 1.56
SKP2-208ENST00000546211 SPATA31A1Q5TZJ5 1347 aa24.81■■□□□ 1.56
SKP2-208ENST00000546211 SHANK3Q9BYB0 1731 aa24.81■■□□□ 1.56
SKP2-208ENST00000546211 HOXB7P09629 217 aa24.8■■□□□ 1.56
SKP2-208ENST00000546211 CABP4P57796 275 aa24.8■■□□□ 1.56
SKP2-208ENST00000546211 CCDC30Q5VVM6 783 aa24.8■■□□□ 1.56
SKP2-208ENST00000546211 NFATC2IPQ8NCF5 419 aa24.8■■□□□ 1.56
SKP2-208ENST00000546211 STK31Q9BXU1 1019 aa24.8■■□□□ 1.56
SKP2-208ENST00000546211 KCNQ3O43525 872 aa24.8■■□□□ 1.56
SKP2-208ENST00000546211 WNK3Q9BYP7 1800 aa24.79■■□□□ 1.56
SKP2-208ENST00000546211 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
SKP2-208ENST00000546211 API5Q9BZZ5 524 aaKnown RBP24.79■■□□□ 1.56
SKP2-208ENST00000546211 MVPQ14764 893 aaKnown RBP24.78■■□□□ 1.56
SKP2-208ENST00000546211 PELP1Q8IZL8 1130 aaKnown RBP24.78■■□□□ 1.56
SKP2-208ENST00000546211 CCDC9Q9Y3X0 531 aaKnown RBP24.78■■□□□ 1.56
SKP2-208ENST00000546211 SPATA31A5Q5VU36 1347 aa24.78■■□□□ 1.56
SKP2-208ENST00000546211 SPATA31A7Q8IWB4 1347 aa24.78■■□□□ 1.56
SKP2-208ENST00000546211 ERVV-2B6SEH9 535 aa24.77■■□□□ 1.56
SKP2-208ENST00000546211 SLC4A2P04920 1241 aa24.77■■□□□ 1.56
SKP2-208ENST00000546211 AAMPQ13685 434 aa24.77■■□□□ 1.56
SKP2-208ENST00000546211 LRP6O75581 1613 aa24.77■■□□□ 1.56
SKP2-208ENST00000546211 EXOC5O00471 708 aa24.76■■□□□ 1.55
SKP2-208ENST00000546211 HDGFL1Q5TGJ6 251 aa24.76■■□□□ 1.55
SKP2-208ENST00000546211 ZNF790Q6PG37 636 aa24.76■■□□□ 1.55
SKP2-208ENST00000546211 PTPRCP08575 1304 aa24.76■■□□□ 1.55
SKP2-208ENST00000546211 ITPRIPQ8IWB1 547 aa24.74■■□□□ 1.55
SKP2-208ENST00000546211 TTC5Q8N0Z6 440 aa24.74■■□□□ 1.55
SKP2-208ENST00000546211 FNBP4Q8N3X1 1017 aaPredicted RBP24.74■■□□□ 1.55
SKP2-208ENST00000546211 TNS2Q63HR2 1409 aa24.74■■□□□ 1.55
SKP2-208ENST00000546211 HEG1Q9ULI3 1381 aa24.73■■□□□ 1.55
SKP2-208ENST00000546211 MEX3CQ5U5Q3 659 aaKnown RBP24.73■■□□□ 1.55
SKP2-208ENST00000546211 TMEM57Q8N5G2 664 aa24.73■■□□□ 1.55
SKP2-208ENST00000546211 DDX19BQ9UMR2 479 aa24.73■■□□□ 1.55
SKP2-208ENST00000546211 BCL9LQ86UU0 1499 aa24.73■■□□□ 1.55
SKP2-208ENST00000546211 SLC39A6Q13433 755 aa24.72■■□□□ 1.55
SKP2-208ENST00000546211 VPS72Q15906 364 aa24.72■■□□□ 1.55
SKP2-208ENST00000546211 BARGINQ6ZT62 677 aa24.72■■□□□ 1.55
SKP2-208ENST00000546211 NECTIN2Q92692 538 aa24.72■■□□□ 1.55
SKP2-208ENST00000546211 ABCC4O15439 1325 aa24.72■■□□□ 1.55
SKP2-208ENST00000546211 GIGYF1O75420 1035 aaPredicted RBP24.71■■□□□ 1.55
SKP2-208ENST00000546211 EIF2S2P20042 333 aaKnown RBP24.71■■□□□ 1.55
SKP2-208ENST00000546211 DDB1Q16531 1140 aa24.7■■□□□ 1.54
SKP2-208ENST00000546211 USP21Q9UK80 565 aa24.69■■□□□ 1.54
SKP2-208ENST00000546211 FMNL2Q96PY5 1086 aa24.68■■□□□ 1.54
SKP2-208ENST00000546211 CHMP4BQ9H444 224 aaKnown RBP24.68■■□□□ 1.54
SKP2-208ENST00000546211 G2E3Q7L622 706 aa24.67■■□□□ 1.54
SKP2-208ENST00000546211 TMOD3Q9NYL9 352 aa24.67■■□□□ 1.54
SKP2-208ENST00000546211 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.66■■□□□ 1.54
SKP2-208ENST00000546211 FLIIQ13045 1269 aa24.66■■□□□ 1.54
SKP2-208ENST00000546211 ZNF496Q96IT1 587 aaPredicted RBP24.66■■□□□ 1.54
SKP2-208ENST00000546211 TOGARAM1Q9Y4F4 1720 aa24.66■■□□□ 1.54
SKP2-208ENST00000546211 RGS12O14924 1447 aa24.66■■□□□ 1.54
SKP2-208ENST00000546211 CACNA1FO60840 1977 aa24.65■■□□□ 1.54
SKP2-208ENST00000546211 SNRPA1P09661 255 aaKnown RBP24.64■■□□□ 1.54
SKP2-208ENST00000546211 CHPF2Q9P2E5 772 aa24.64■■□□□ 1.54
SKP2-208ENST00000546211 DBF4Q9UBU7 674 aaPredicted RBP24.64■■□□□ 1.54
SKP2-208ENST00000546211 FKBP5Q13451 457 aaPredicted RBP24.63■■□□□ 1.53
SKP2-208ENST00000546211 PRAMEF22A3QJZ6 481 aa24.63■■□□□ 1.53
SKP2-208ENST00000546211 INTS3Q68E01 1043 aaKnown RBP24.63■■□□□ 1.53
SKP2-208ENST00000546211 PAPPAQ13219 1627 aa24.63■■□□□ 1.53
SKP2-208ENST00000546211 FAM98CQ17RN3 349 aaKnown RBP24.62■■□□□ 1.53
SKP2-208ENST00000546211 CENPQQ7L2Z9 268 aaPredicted RBP24.61■■□□□ 1.53
SKP2-208ENST00000546211 AFF2P51816 1311 aa24.61■■□□□ 1.53
SKP2-208ENST00000546211 ZBTB40Q9NUA8 1239 aa24.6■■□□□ 1.53
SKP2-208ENST00000546211 C5P01031 1676 aa24.6■■□□□ 1.53
SKP2-208ENST00000546211 PHAXQ9H814 394 aaKnown RBP24.59■■□□□ 1.53
SKP2-208ENST00000546211 UBR2Q8IWV8 1755 aa24.59■■□□□ 1.53
SKP2-208ENST00000546211 ZBTB7BO15156 539 aaPredicted RBP24.59■■□□□ 1.53
SKP2-208ENST00000546211 PIGBQ92521 554 aa24.59■■□□□ 1.53
SKP2-208ENST00000546211 KDM2BQ8NHM5 1336 aa24.58■■□□□ 1.53
SKP2-208ENST00000546211 CCT4P50991 539 aaKnown RBP24.58■■□□□ 1.52
SKP2-208ENST00000546211 SLC4A10Q6U841 1118 aa24.58■■□□□ 1.52
SKP2-208ENST00000546211 DDX21Q9NR30 783 aaKnown RBP eCLIP24.58■■□□□ 1.52
SKP2-208ENST00000546211 HYPKQ9NX55 129 aa24.58■■□□□ 1.52
SKP2-208ENST00000546211 KCPQ6ZWJ8 1503 aa24.58■■□□□ 1.52
SKP2-208ENST00000546211 F6X3S4 739 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms