RNA–Protein interactions for RNA: ENST00000546146.5

LDHC-210, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 701 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-210ENST00000546146 ASTLQ6HA08 431 aaPredicted RBP13.22□□□□□ -0.29
LDHC-210ENST00000546146 SSH1Q8WYL5 1049 aa13.22□□□□□ -0.29
LDHC-210ENST00000546146 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
LDHC-210ENST00000546146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.29
LDHC-210ENST00000546146 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
LDHC-210ENST00000546146 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
LDHC-210ENST00000546146 C7P10643 843 aa13.21□□□□□ -0.29
LDHC-210ENST00000546146 C20orf194Q5TEA3 1177 aa13.21□□□□□ -0.29
LDHC-210ENST00000546146 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
LDHC-210ENST00000546146 CHMP4BQ9H444 224 aaKnown RBP13.21□□□□□ -0.29
LDHC-210ENST00000546146 CRB1P82279 1406 aa13.21□□□□□ -0.3
LDHC-210ENST00000546146 NCAPD2Q15021 1401 aa13.21□□□□□ -0.3
LDHC-210ENST00000546146 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
LDHC-210ENST00000546146 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
LDHC-210ENST00000546146 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
LDHC-210ENST00000546146 DZIP1LQ8IYY4 767 aaKnown RBP13.2□□□□□ -0.3
LDHC-210ENST00000546146 IL17REQ8NFR9 667 aa13.2□□□□□ -0.3
LDHC-210ENST00000546146 NOB1Q9ULX3 412 aaKnown RBP13.2□□□□□ -0.3
LDHC-210ENST00000546146 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
LDHC-210ENST00000546146 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
LDHC-210ENST00000546146 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
LDHC-210ENST00000546146 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
LDHC-210ENST00000546146 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
LDHC-210ENST00000546146 ARHGAP45Q92619 1136 aa13.19□□□□□ -0.3
LDHC-210ENST00000546146 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
LDHC-210ENST00000546146 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
LDHC-210ENST00000546146 UBAP1LF5GYI3 381 aa13.18□□□□□ -0.3
LDHC-210ENST00000546146 PIP4K2BP78356 416 aa13.18□□□□□ -0.3
LDHC-210ENST00000546146 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
LDHC-210ENST00000546146 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
LDHC-210ENST00000546146 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
LDHC-210ENST00000546146 COL18A1P39060 1754 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
LDHC-210ENST00000546146 CRYBG1Q9Y4K1 1723 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
LDHC-210ENST00000546146 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 MRPL50Q8N5N7 158 aaKnown RBP13.17□□□□□ -0.3
LDHC-210ENST00000546146 PANK1Q8TE04 598 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
LDHC-210ENST00000546146 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
LDHC-210ENST00000546146 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
LDHC-210ENST00000546146 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
LDHC-210ENST00000546146 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
LDHC-210ENST00000546146 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
LDHC-210ENST00000546146 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
LDHC-210ENST00000546146 OVOS2A0A0G2JMS6 1433 aa13.15□□□□□ -0.3
LDHC-210ENST00000546146 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
LDHC-210ENST00000546146 MVPQ14764 893 aaKnown RBP13.15□□□□□ -0.3
LDHC-210ENST00000546146 CCDC30Q5VVM6 783 aa13.15□□□□□ -0.3
LDHC-210ENST00000546146 LGR6Q9HBX8 967 aa13.15□□□□□ -0.3
LDHC-210ENST00000546146 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
LDHC-210ENST00000546146 CEMIPQ8WUJ3 1361 aa13.15□□□□□ -0.3
LDHC-210ENST00000546146 TRIM27P14373 513 aa13.14□□□□□ -0.31
LDHC-210ENST00000546146 IL2RBP14784 551 aa13.14□□□□□ -0.31
LDHC-210ENST00000546146 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
LDHC-210ENST00000546146 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
LDHC-210ENST00000546146 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
LDHC-210ENST00000546146 LMO7Q8WWI1 1683 aa13.14□□□□□ -0.31
LDHC-210ENST00000546146 COL5A2P05997 1499 aaPredicted RBP13.13□□□□□ -0.31
LDHC-210ENST00000546146 PHKG2P15735 406 aa13.13□□□□□ -0.31
LDHC-210ENST00000546146 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
LDHC-210ENST00000546146 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
LDHC-210ENST00000546146 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
LDHC-210ENST00000546146 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
LDHC-210ENST00000546146 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
LDHC-210ENST00000546146 MAP3K13O43283 966 aa13.12□□□□□ -0.31
LDHC-210ENST00000546146 HOXB7P09629 217 aa13.12□□□□□ -0.31
LDHC-210ENST00000546146 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
LDHC-210ENST00000546146 PTPRCP08575 1304 aa13.12□□□□□ -0.31
LDHC-210ENST00000546146 PHLPP1O60346 1717 aa13.11□□□□□ -0.31
LDHC-210ENST00000546146 RLBP1P12271 317 aa13.11□□□□□ -0.31
LDHC-210ENST00000546146 LARP1Q6PKG0 1096 aaKnown RBP13.11□□□□□ -0.31
LDHC-210ENST00000546146 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
LDHC-210ENST00000546146 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
LDHC-210ENST00000546146 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
LDHC-210ENST00000546146 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
LDHC-210ENST00000546146 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
LDHC-210ENST00000546146 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
LDHC-210ENST00000546146 COL22A1Q8NFW1 1626 aaPredicted RBP13.1□□□□□ -0.31
LDHC-210ENST00000546146 NUTM2BA6NNL0 878 aaPredicted RBP13.09□□□□□ -0.31
LDHC-210ENST00000546146 NUTM2EB1AL46 878 aaPredicted RBP13.09□□□□□ -0.31
LDHC-210ENST00000546146 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
LDHC-210ENST00000546146 CABP4P57796 275 aa13.09□□□□□ -0.31
LDHC-210ENST00000546146 EIF4A1P60842 406 aaKnown RBP13.09□□□□□ -0.31
LDHC-210ENST00000546146 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
LDHC-210ENST00000546146 NUTM2AQ8IVF1 878 aaPredicted RBP13.09□□□□□ -0.31
LDHC-210ENST00000546146 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
LDHC-210ENST00000546146 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
LDHC-210ENST00000546146 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
LDHC-210ENST00000546146 SCUBE2Q9NQ36 999 aa13.09□□□□□ -0.31
LDHC-210ENST00000546146 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
LDHC-210ENST00000546146 MEGF6O75095 1541 aa13.08□□□□□ -0.31
LDHC-210ENST00000546146 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
LDHC-210ENST00000546146 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
LDHC-210ENST00000546146 TNNQ9UQP3 1299 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms