RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	SULF1	Q8IWU6	871 aa		9.35	□□□□□ -0.91
TAF1D-222	ENST00000546088	DCAF11	Q8TEB1	546 aa		9.35	□□□□□ -0.91
TAF1D-222	ENST00000546088	PPL	O60437	1756 aa		9.35	□□□□□ -0.91
TAF1D-222	ENST00000546088	PLEKHG1	Q9ULL1	1385 aa		9.35	□□□□□ -0.91
TAF1D-222	ENST00000546088	MMP16	P51512	607 aa		9.34	□□□□□ -0.91
TAF1D-222	ENST00000546088	FBXO41	Q8TF61	875 aa		9.34	□□□□□ -0.91
TAF1D-222	ENST00000546088	ADAMTS13	Q76LX8	1427 aa		9.33	□□□□□ -0.92
TAF1D-222	ENST00000546088	LTBP4	Q8N2S1	1624 aa		9.33	□□□□□ -0.92
TAF1D-222	ENST00000546088	GRIPAP1	Q4V328	841 aa		9.33	□□□□□ -0.92
TAF1D-222	ENST00000546088	NXF1	Q9UBU9	619 aa	Known RBP	9.33	□□□□□ -0.92
TAF1D-222	ENST00000546088	NRXN3	Q9Y4C0	1643 aa		9.33	□□□□□ -0.92
TAF1D-222	ENST00000546088	LOR	P23490	312 aa	Predicted RBP	9.32	□□□□□ -0.92
TAF1D-222	ENST00000546088	TMEM132E	Q6IEE7	984 aa		9.32	□□□□□ -0.92
TAF1D-222	ENST00000546088	IFT172	Q9UG01	1749 aa		9.32	□□□□□ -0.92
TAF1D-222	ENST00000546088	MET	P08581	1390 aa		9.31	□□□□□ -0.92
TAF1D-222	ENST00000546088	ZSCAN1	Q8NBB4	408 aa		9.31	□□□□□ -0.92
TAF1D-222	ENST00000546088	RPGRIP1L	Q68CZ1	1315 aa		9.31	□□□□□ -0.92
TAF1D-222	ENST00000546088	KCNA6	P17658	529 aa		9.31	□□□□□ -0.92
TAF1D-222	ENST00000546088		Q3C1V9	767 aa		9.31	□□□□□ -0.92
TAF1D-222	ENST00000546088	CFAP70	Q5T0N1	1121 aa		9.31	□□□□□ -0.92
TAF1D-222	ENST00000546088	NPAS3	Q8IXF0	933 aa		9.31	□□□□□ -0.92
TAF1D-222	ENST00000546088	STK26	Q9P289	416 aa		9.31	□□□□□ -0.92
TAF1D-222	ENST00000546088	GNPAT	O15228	680 aa		9.3	□□□□□ -0.92
TAF1D-222	ENST00000546088	GMPR	P36959	345 aa		9.3	□□□□□ -0.92
TAF1D-222	ENST00000546088	PROSER2	Q86WR7	435 aa	Predicted RBP	9.3	□□□□□ -0.92
TAF1D-222	ENST00000546088	CCER1	Q8TC90	406 aa	Predicted RBP	9.3	□□□□□ -0.92
TAF1D-222	ENST00000546088	PTPRU	Q92729	1446 aa		9.3	□□□□□ -0.92
TAF1D-222	ENST00000546088	AMOTL2	Q9Y2J4	779 aa		9.3	□□□□□ -0.92
TAF1D-222	ENST00000546088	TBX22	Q9Y458	520 aa		9.3	□□□□□ -0.92
TAF1D-222	ENST00000546088	SETBP1	Q9Y6X0	1596 aa		9.29	□□□□□ -0.92
TAF1D-222	ENST00000546088	SEMA3E	O15041	775 aa		9.29	□□□□□ -0.92
TAF1D-222	ENST00000546088	RC3H1	Q5TC82	1133 aa	Known RBP	9.29	□□□□□ -0.92
TAF1D-222	ENST00000546088	L3MBTL2	Q969R5	705 aa		9.29	□□□□□ -0.92
TAF1D-222	ENST00000546088	ALK	Q9UM73	1620 aa		9.29	□□□□□ -0.92
TAF1D-222	ENST00000546088	CHD2	O14647	1828 aa	Known RBP	9.29	□□□□□ -0.92
TAF1D-222	ENST00000546088	DXO	O77932	396 aa	Known RBP	9.28	□□□□□ -0.92
TAF1D-222	ENST00000546088	IRF7	Q92985	503 aa		9.28	□□□□□ -0.92
TAF1D-222	ENST00000546088	WNT7B	P56706	349 aa		9.28	□□□□□ -0.92
TAF1D-222	ENST00000546088	C14orf37	Q86TY3	774 aa		9.28	□□□□□ -0.92
TAF1D-222	ENST00000546088	NLRP7	Q8WX94	980 aa		9.28	□□□□□ -0.92
TAF1D-222	ENST00000546088	LRRC7	Q96NW7	1537 aa		9.28	□□□□□ -0.92
TAF1D-222	ENST00000546088	SETD1A	O15047	1707 aa	Known RBP	9.27	□□□□□ -0.93
TAF1D-222	ENST00000546088	PIP4K2B	P78356	416 aa		9.27	□□□□□ -0.93
TAF1D-222	ENST00000546088	TMEM94	Q12767	1356 aa		9.27	□□□□□ -0.93
TAF1D-222	ENST00000546088	PIK3C2G	O75747	1445 aa		9.27	□□□□□ -0.93
TAF1D-222	ENST00000546088	XIRP1	Q702N8	1843 aa	Known RBP	9.26	□□□□□ -0.93
TAF1D-222	ENST00000546088	CPS1	P31327	1500 aa		9.26	□□□□□ -0.93
TAF1D-222	ENST00000546088	UBAP1L	F5GYI3	381 aa		9.26	□□□□□ -0.93
TAF1D-222	ENST00000546088	SKOR1	P84550	965 aa		9.26	□□□□□ -0.93
TAF1D-222	ENST00000546088	SAFB2	Q14151	953 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
TAF1D-222	ENST00000546088	DIP2A	Q14689	1571 aa		9.26	□□□□□ -0.93
TAF1D-222	ENST00000546088	USB1	Q9BQ65	265 aa	Known RBP	9.25	□□□□□ -0.93
TAF1D-222	ENST00000546088	TSHZ2	Q9NRE2	1034 aa		9.25	□□□□□ -0.93
TAF1D-222	ENST00000546088	MYOM2	P54296	1465 aa		9.25	□□□□□ -0.93
TAF1D-222	ENST00000546088	ASXL1	Q8IXJ9	1541 aa		9.25	□□□□□ -0.93
TAF1D-222	ENST00000546088	NBPF1	Q3BBV0	1214 aa		9.25	□□□□□ -0.93
TAF1D-222	ENST00000546088	WAPL	Q7Z5K2	1190 aa		9.25	□□□□□ -0.93
TAF1D-222	ENST00000546088	C14orf93	Q9H972	538 aa	Known RBP	9.25	□□□□□ -0.93
TAF1D-222	ENST00000546088	TONSL	Q96HA7	1378 aa		9.25	□□□□□ -0.93
TAF1D-222	ENST00000546088	NWD1	Q149M9	1564 aa		9.24	□□□□□ -0.93
TAF1D-222	ENST00000546088	GPR37	O15354	613 aa		9.24	□□□□□ -0.93
TAF1D-222	ENST00000546088	PHOX2B	Q99453	314 aa		9.24	□□□□□ -0.93
TAF1D-222	ENST00000546088	TRAK1	Q9UPV9	953 aa		9.24	□□□□□ -0.93
TAF1D-222	ENST00000546088	NRXN1	Q9ULB1	1477 aa		9.23	□□□□□ -0.93
TAF1D-222	ENST00000546088	ROBO2	Q9HCK4	1378 aa		9.23	□□□□□ -0.93
TAF1D-222	ENST00000546088		H3BM21	787 aa		9.23	□□□□□ -0.93
TAF1D-222	ENST00000546088	ALDH1A1	P00352	501 aa		9.23	□□□□□ -0.93
TAF1D-222	ENST00000546088	RBM26	Q5T8P6	1007 aa	Known RBP	9.23	□□□□□ -0.93
TAF1D-222	ENST00000546088	XRN1	Q8IZH2	1706 aa	Known RBP	9.23	□□□□□ -0.93
TAF1D-222	ENST00000546088	PLEKHH1	Q9ULM0	1364 aa		9.23	□□□□□ -0.93
TAF1D-222	ENST00000546088	NBPF8	Q3BBV2	869 aa		9.22	□□□□□ -0.93
TAF1D-222	ENST00000546088	TRIM46	Q7Z4K8	759 aa		9.22	□□□□□ -0.93
TAF1D-222	ENST00000546088	NKTR	P30414	1462 aa	Known RBP	9.22	□□□□□ -0.93
TAF1D-222	ENST00000546088	PIK3R4	Q99570	1358 aa		9.22	□□□□□ -0.93
TAF1D-222	ENST00000546088	CCDC24	Q8N4L8	307 aa		9.22	□□□□□ -0.93
TAF1D-222	ENST00000546088	PRAG1	Q86YV5	1406 aa		9.21	□□□□□ -0.93
TAF1D-222	ENST00000546088	YTHDC2	Q9H6S0	1430 aa	Known RBP	9.21	□□□□□ -0.93
TAF1D-222	ENST00000546088	MSH6	P52701	1360 aa		9.2	□□□□□ -0.94
TAF1D-222	ENST00000546088	TOM1	O60784	492 aa		9.2	□□□□□ -0.94
TAF1D-222	ENST00000546088	PRAM1	Q96QH2	718 aa		9.2	□□□□□ -0.94
TAF1D-222	ENST00000546088	HIRIP3	Q9BW71	556 aa	Predicted RBP	9.2	□□□□□ -0.94
TAF1D-222	ENST00000546088	BMP1	P13497	986 aa		9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	NALCN	Q8IZF0	1738 aa		9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	LAMC1	P11047	1609 aa		9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	LRPPRC	P42704	1394 aa	Known RBP	9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	ADGRB1	O14514	1584 aa		9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	TESPA1	A2RU30	521 aa	Predicted RBP	9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	CAPN5	O15484	640 aa	Predicted RBP	9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	SIAH2	O43255	324 aa		9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	CD46	P15529	392 aa		9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	SMYD5	Q6GMV2	418 aa		9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	POGK	Q9P215	609 aa		9.19	□□□□□ -0.94
TAF1D-222	ENST00000546088	ERBB4	Q15303	1308 aa		9.18	□□□□□ -0.94
TAF1D-222	ENST00000546088	MINK1	Q8N4C8	1332 aa	Predicted RBP	9.18	□□□□□ -0.94
TAF1D-222	ENST00000546088	ATF3	P18847	181 aa		9.18	□□□□□ -0.94
TAF1D-222	ENST00000546088	VEGFB	P49765	207 aa		9.18	□□□□□ -0.94
TAF1D-222	ENST00000546088	C19orf44	Q9H6X5	657 aa		9.18	□□□□□ -0.94
TAF1D-222	ENST00000546088	TRPM1	Q7Z4N2	1603 aa		9.17	□□□□□ -0.94
TAF1D-222	ENST00000546088	ROCK2	O75116	1388 aa	Known RBP	9.17	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms