RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 FTSJ3Q8IY81 847 aaKnown RBP8.14□□□□□ -1.11
SNHG1-225ENST00000545920 GPCPD1Q9NPB8 672 aa8.14□□□□□ -1.11
SNHG1-225ENST00000545920 CHMP5Q9NZZ3 219 aa8.14□□□□□ -1.11
SNHG1-225ENST00000545920 QRICH2Q9H0J4 1663 aa8.14□□□□□ -1.11
SNHG1-225ENST00000545920 PIK3C2BO00750 1634 aa8.14□□□□□ -1.11
SNHG1-225ENST00000545920 GOLGA8CPA6NN73 597 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 DDX11L8A8MPP1 907 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 MTHFSP49914 203 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 SMC5Q8IY18 1101 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 PANK1Q8TE04 598 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 ARHGAP45Q92619 1136 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 SNX21Q969T3 373 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 PHOX2BQ99453 314 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 ZBED2Q9BTP6 218 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 TERF2IPQ9NYB0 399 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 PDZRN3Q9UPQ7 1066 aa8.13□□□□□ -1.11
SNHG1-225ENST00000545920 KIF24Q5T7B8 1368 aa8.12□□□□□ -1.11
SNHG1-225ENST00000545920 PNPLA6Q8IY17 1366 aa8.12□□□□□ -1.11
SNHG1-225ENST00000545920 SKIV2LQ15477 1246 aaKnown RBP8.12□□□□□ -1.11
SNHG1-225ENST00000545920 MRPL50Q8N5N7 158 aaKnown RBP8.12□□□□□ -1.11
SNHG1-225ENST00000545920 WNT2BQ93097 391 aa8.12□□□□□ -1.11
SNHG1-225ENST00000545920 PCDHB15Q9Y5E8 787 aa8.12□□□□□ -1.11
SNHG1-225ENST00000545920 PCDHGA10Q9Y5H3 936 aa8.12□□□□□ -1.11
SNHG1-225ENST00000545920 CDC42BPGQ6DT37 1551 aa8.12□□□□□ -1.11
SNHG1-225ENST00000545920 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
SNHG1-225ENST00000545920 MROH2AA6NES4 1674 aa8.11□□□□□ -1.11
SNHG1-225ENST00000545920 GLI2P10070 1586 aa8.11□□□□□ -1.11
SNHG1-225ENST00000545920 APBB1O00213 710 aa8.11□□□□□ -1.11
SNHG1-225ENST00000545920 MAP3K7O43318 606 aa8.11□□□□□ -1.11
SNHG1-225ENST00000545920 TRAK2O60296 914 aa8.11□□□□□ -1.11
SNHG1-225ENST00000545920 MCM6Q14566 821 aa8.11□□□□□ -1.11
SNHG1-225ENST00000545920 SKOR2Q2VWA4 1001 aaPredicted RBP8.11□□□□□ -1.11
SNHG1-225ENST00000545920 ATF7IPQ6VMQ6 1270 aa8.11□□□□□ -1.11
SNHG1-225ENST00000545920 RBM33Q96EV2 1170 aaKnown RBP8.11□□□□□ -1.11
SNHG1-225ENST00000545920 SLC12A5Q9H2X9 1139 aa8.11□□□□□ -1.11
SNHG1-225ENST00000545920 NEXMIFQ5QGS0 1516 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 TULP4Q9NRJ4 1543 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 FSD2A1L4K1 749 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 U2AF1L5P0DN76 240 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-225ENST00000545920 SSTR3P32745 418 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-225ENST00000545920 MCM4P33991 863 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 SLC4A3P48751 1232 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 RBM25P49756 843 aaKnown RBP8.1□□□□□ -1.11
SNHG1-225ENST00000545920 MDM2Q00987 491 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-225ENST00000545920 U2AF1Q01081 240 aaKnown RBP eCLIP8.1□□□□□ -1.112e-11■■■■□ 21.1
SNHG1-225ENST00000545920 TYW1BQ6NUM6 668 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 HSCBQ8IWL3 235 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 FBXW7Q969H0 707 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 GCC1Q96CN9 775 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 PLEKHF1Q96S99 279 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 C22orf23Q9BZE7 217 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 COL3A1P02461 1466 aaPredicted RBP8.1□□□□□ -1.11
SNHG1-225ENST00000545920 NCOA3Q9Y6Q9 1424 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 FRMPD1Q5SYB0 1578 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 PIK3R4Q99570 1358 aa8.1□□□□□ -1.11
SNHG1-225ENST00000545920 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
SNHG1-225ENST00000545920 GOLGA6L3A6NEY3 463 aa8.09□□□□□ -1.11
SNHG1-225ENST00000545920 TMPOP42166 694 aaKnown RBP8.09□□□□□ -1.11
SNHG1-225ENST00000545920 MRE11P49959 708 aa8.09□□□□□ -1.11
SNHG1-225ENST00000545920 TSR1Q2NL82 804 aaKnown RBP8.09□□□□□ -1.11
SNHG1-225ENST00000545920 SKAP1Q86WV1 359 aa8.09□□□□□ -1.11
SNHG1-225ENST00000545920 NBPF3Q9H094 633 aa8.09□□□□□ -1.11
SNHG1-225ENST00000545920 SMC4Q9NTJ3 1288 aa8.09□□□□□ -1.11
SNHG1-225ENST00000545920 FAM217BQ9NTX9 383 aaPredicted RBP8.09□□□□□ -1.11
SNHG1-225ENST00000545920 BRPF3Q9ULD4 1205 aa8.09□□□□□ -1.11
SNHG1-225ENST00000545920 CD109Q6YHK3 1445 aa8.09□□□□□ -1.11
SNHG1-225ENST00000545920 ARHGEF28Q8N1W1 1705 aaKnown RBP8.09□□□□□ -1.11
SNHG1-225ENST00000545920 CAMSAP1Q5T5Y3 1602 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 OATP04181 439 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 RLBP1P12271 317 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 NUCB1Q02818 461 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 LMOD3Q0VAK6 560 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 BMP2KLQ5H9B9 411 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 HDGFL2Q7Z4V5 671 aaPredicted RBP8.08□□□□□ -1.12
SNHG1-225ENST00000545920 TTC13Q8NBP0 860 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 CERKQ8TCT0 537 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 ZBTB40Q9NUA8 1239 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 PODXL2Q9NZ53 605 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 DLC1Q96QB1 1528 aa8.08□□□□□ -1.12
SNHG1-225ENST00000545920 ANKRD26Q9UPS8 1709 aa8.07□□□□□ -1.12
SNHG1-225ENST00000545920 TRIM27P14373 513 aa8.07□□□□□ -1.12
SNHG1-225ENST00000545920 METTL3Q86U44 580 aaKnown RBP8.07□□□□□ -1.12
SNHG1-225ENST00000545920 ZDHHC16Q969W1 377 aa8.07□□□□□ -1.12
SNHG1-225ENST00000545920 GBP4Q96PP9 640 aa8.07□□□□□ -1.12
SNHG1-225ENST00000545920 BEGAINQ9BUH8 593 aa8.07□□□□□ -1.12
SNHG1-225ENST00000545920 ATP7BP35670 1465 aa8.06□□□□□ -1.12
SNHG1-225ENST00000545920 PTCH1Q13635 1447 aa8.06□□□□□ -1.12
SNHG1-225ENST00000545920 DIAPH1O60610 1272 aaKnown RBP8.06□□□□□ -1.12
SNHG1-225ENST00000545920 CLEC17AQ6ZS10 378 aa8.06□□□□□ -1.12
SNHG1-225ENST00000545920 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.06□□□□□ -1.12
SNHG1-225ENST00000545920 RBM27Q9P2N5 1060 aaKnown RBP8.06□□□□□ -1.12
SNHG1-225ENST00000545920 A0A1W2PP64 1363 aa8.06□□□□□ -1.12
SNHG1-225ENST00000545920 IBTKQ9P2D0 1353 aaPredicted RBP8.06□□□□□ -1.12
SNHG1-225ENST00000545920 DDIT3P35638 169 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 GNAI1P63096 354 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 EXOSC9Q06265 439 aaKnown RBP8.05□□□□□ -1.12
SNHG1-225ENST00000545920 ITPRIPQ8IWB1 547 aa8.05□□□□□ -1.12
SNHG1-225ENST00000545920 PXYLP1Q8TE99 480 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms