RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 UBAP1LF5GYI3 381 aa6.82□□□□□ -1.32
LRP6-207ENST00000545658 H3BM21 787 aa6.82□□□□□ -1.32
LRP6-207ENST00000545658 GMPRP36959 345 aa6.82□□□□□ -1.32
LRP6-207ENST00000545658 CEBPAP49715 358 aaPredicted RBP6.82□□□□□ -1.32
LRP6-207ENST00000545658 DHX9Q08211 1270 aaKnown RBP6.82□□□□□ -1.32
LRP6-207ENST00000545658 NPAS3Q8IXF0 933 aa6.82□□□□□ -1.32
LRP6-207ENST00000545658 IRF7Q92985 503 aa6.82□□□□□ -1.32
LRP6-207ENST00000545658 FER1L4A9Z1Z3 1794 aa6.82□□□□□ -1.32
LRP6-207ENST00000545658 SOS2Q07890 1332 aaPredicted RBP6.81□□□□□ -1.32
LRP6-207ENST00000545658 ATP10BO94823 1461 aa6.81□□□□□ -1.32
LRP6-207ENST00000545658 GOLGA3Q08378 1498 aa6.81□□□□□ -1.32
LRP6-207ENST00000545658 INSM1Q01101 510 aaPredicted RBP6.81□□□□□ -1.32
LRP6-207ENST00000545658 NBPF20Q3BBV1 942 aa6.81□□□□□ -1.32
LRP6-207ENST00000545658 AGBL1Q96MI9 1066 aa6.81□□□□□ -1.32
LRP6-207ENST00000545658 TMPRSS4Q9NRS4 437 aa6.81□□□□□ -1.32
LRP6-207ENST00000545658 EFCAB5A4FU69 1503 aa6.81□□□□□ -1.32
LRP6-207ENST00000545658 ZFYVE16Q7Z3T8 1539 aa6.81□□□□□ -1.32
LRP6-207ENST00000545658 ARHGEF12Q9NZN5 1544 aa6.81□□□□□ -1.32
LRP6-207ENST00000545658 ERBB4Q15303 1308 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 RAPGEF2Q9Y4G8 1499 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 FIGNL2A6NMB9 653 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 TTLL8A6PVC2 850 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 RELBQ01201 579 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 RICTORQ6R327 1708 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 Q6ZVU0 165 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 GJD4Q96KN9 370 aaPredicted RBP6.8□□□□□ -1.32
LRP6-207ENST00000545658 DNMT3LQ9UJW3 386 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 ZMYM4Q5VZL5 1548 aa6.8□□□□□ -1.32
LRP6-207ENST00000545658 SUPT5HO00267 1087 aaKnown RBP6.79□□□□□ -1.32
LRP6-207ENST00000545658 PCDHB9Q9Y5E1 797 aa6.79□□□□□ -1.32
LRP6-207ENST00000545658 MAGI2Q86UL8 1455 aa6.79□□□□□ -1.32
LRP6-207ENST00000545658 ZBBXA8MT70 800 aa6.78□□□□□ -1.32
LRP6-207ENST00000545658 ERVH48-1M5A8F1 160 aa6.78□□□□□ -1.32
LRP6-207ENST00000545658 FBXO45P0C2W1 286 aa6.78□□□□□ -1.32
LRP6-207ENST00000545658 HSPA1LP34931 641 aa6.78□□□□□ -1.32
LRP6-207ENST00000545658 ZNF784Q8NCA9 323 aaPredicted RBP6.78□□□□□ -1.32
LRP6-207ENST00000545658 NCOA1Q15788 1441 aa6.77□□□□□ -1.33
LRP6-207ENST00000545658 SPINT1O43278 529 aa6.77□□□□□ -1.33
LRP6-207ENST00000545658 PPFIA3O75145 1194 aa6.77□□□□□ -1.33
LRP6-207ENST00000545658 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.77□□□□□ -1.336e-6■■■■□ 22.6
LRP6-207ENST00000545658 ZNF395Q9H8N7 513 aaPredicted RBP6.77□□□□□ -1.33
LRP6-207ENST00000545658 ZNF335Q9H4Z2 1342 aaPredicted RBP6.76□□□□□ -1.33
LRP6-207ENST00000545658 ESPNB1AK53 854 aa6.76□□□□□ -1.33
LRP6-207ENST00000545658 BANK1Q8NDB2 785 aa6.76□□□□□ -1.33
LRP6-207ENST00000545658 INSM2Q96T92 566 aaPredicted RBP6.76□□□□□ -1.33
LRP6-207ENST00000545658 POLMQ9NP87 494 aaPredicted RBP6.76□□□□□ -1.33
LRP6-207ENST00000545658 CYLDQ9NQC7 956 aa6.76□□□□□ -1.33
LRP6-207ENST00000545658 SNRKQ9NRH2 765 aa6.76□□□□□ -1.33
LRP6-207ENST00000545658 STK17AQ9UEE5 414 aa6.76□□□□□ -1.33
LRP6-207ENST00000545658 HECW1Q76N89 1606 aa6.76□□□□□ -1.33
LRP6-207ENST00000545658 C9orf84Q5VXU9 1444 aa6.76□□□□□ -1.33
LRP6-207ENST00000545658 ATP10AO60312 1499 aa6.75□□□□□ -1.33
LRP6-207ENST00000545658 LILRA1O75019 489 aa6.75□□□□□ -1.33
LRP6-207ENST00000545658 GIGYF1O75420 1035 aaPredicted RBP6.75□□□□□ -1.33
LRP6-207ENST00000545658 ADD1P35611 737 aaKnown RBP6.75□□□□□ -1.33
LRP6-207ENST00000545658 CTSOP43234 321 aaPredicted RBP6.75□□□□□ -1.33
LRP6-207ENST00000545658 PTSQ03393 145 aa6.75□□□□□ -1.33
LRP6-207ENST00000545658 MTMR14Q8NCE2 650 aa6.75□□□□□ -1.33
LRP6-207ENST00000545658 CFAP74Q9C0B2 1584 aa6.74□□□□□ -1.33
LRP6-207ENST00000545658 ADH1AP07327 375 aa6.74□□□□□ -1.33
LRP6-207ENST00000545658 FAM9AQ8IZU1 332 aaPredicted RBP6.74□□□□□ -1.33
LRP6-207ENST00000545658 SETD1BQ9UPS6 1966 aaKnown RBP6.74□□□□□ -1.33
LRP6-207ENST00000545658 PIP4K2BP78356 416 aa6.73□□□□□ -1.33
LRP6-207ENST00000545658 NR1H3Q13133 447 aa6.73□□□□□ -1.33
LRP6-207ENST00000545658 SEPT12Q8IYM1 358 aa6.73□□□□□ -1.33
LRP6-207ENST00000545658 NDUFB9Q9Y6M9 179 aa6.73□□□□□ -1.33
LRP6-207ENST00000545658 CTTNBP2Q8WZ74 1663 aa6.73□□□□□ -1.33
LRP6-207ENST00000545658 TRAPPC8Q9Y2L5 1435 aa6.73□□□□□ -1.33
LRP6-207ENST00000545658 VSIG8P0DPA2 414 aa6.72□□□□□ -1.33
LRP6-207ENST00000545658 PTGIRP43119 386 aa6.72□□□□□ -1.33
LRP6-207ENST00000545658 ZSCAN1Q8NBB4 408 aa6.72□□□□□ -1.33
LRP6-207ENST00000545658 CAMSAP1Q5T5Y3 1602 aa6.72□□□□□ -1.33
LRP6-207ENST00000545658 SCAPERQ9BY12 1400 aa6.71□□□□□ -1.34
LRP6-207ENST00000545658 PRKCSHP14314 528 aaPredicted RBP6.71□□□□□ -1.34
LRP6-207ENST00000545658 CCDC155Q8N6L0 562 aa6.71□□□□□ -1.34
LRP6-207ENST00000545658 KDF1Q8NAX2 398 aaPredicted RBP6.71□□□□□ -1.34
LRP6-207ENST00000545658 RNF217Q8TC41 542 aa6.71□□□□□ -1.34
LRP6-207ENST00000545658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.71□□□□□ -1.34
LRP6-207ENST00000545658 RAPGEF6Q8TEU7 1601 aa6.7□□□□□ -1.34
LRP6-207ENST00000545658 APBB1O00213 710 aa6.7□□□□□ -1.34
LRP6-207ENST00000545658 TOM1O60784 492 aa6.7□□□□□ -1.34
LRP6-207ENST00000545658 GPR37L1O60883 481 aa6.7□□□□□ -1.34
LRP6-207ENST00000545658 LORP23490 312 aaPredicted RBP6.7□□□□□ -1.34
LRP6-207ENST00000545658 ZNF330Q9Y3S2 320 aaPredicted RBP6.7□□□□□ -1.34
LRP6-207ENST00000545658 C3P01024 1663 aa6.7□□□□□ -1.34
LRP6-207ENST00000545658 NUP153P49790 1475 aaKnown RBP6.69□□□□□ -1.34
LRP6-207ENST00000545658 PLEKHD1A6NEE1 506 aa6.69□□□□□ -1.34
LRP6-207ENST00000545658 RNF20Q5VTR2 975 aa6.69□□□□□ -1.34
LRP6-207ENST00000545658 FOXD4L5Q5VV16 416 aaPredicted RBP6.69□□□□□ -1.34
LRP6-207ENST00000545658 GPR161Q8N6U8 529 aaKnown RBP6.69□□□□□ -1.34
LRP6-207ENST00000545658 TRIM52Q96A61 297 aa6.69□□□□□ -1.34
LRP6-207ENST00000545658 PCDHB11Q9Y5F2 797 aa6.69□□□□□ -1.34
LRP6-207ENST00000545658 SLC35F4A4IF30 521 aa6.68□□□□□ -1.34
LRP6-207ENST00000545658 FAM181BA6NEQ2 426 aa6.68□□□□□ -1.34
LRP6-207ENST00000545658 ATP5J2-PTCD1G3V325 749 aa6.68□□□□□ -1.34
LRP6-207ENST00000545658 MEN1O00255 615 aa6.68□□□□□ -1.34
LRP6-207ENST00000545658 MCCD1P59942 119 aaPredicted RBP6.68□□□□□ -1.34
LRP6-207ENST00000545658 RGS17Q9UGC6 210 aaPredicted RBP6.68□□□□□ -1.34
LRP6-207ENST00000545658 TBC1D2BQ9UPU7 963 aa6.68□□□□□ -1.34
LRP6-207ENST00000545658 PLA2R1Q13018 1463 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms