RNA–Protein interactions for RNA: ENST00000544959.1

AP003785.1-201, humanhuman

TSL 4 BASIC

Gene AP003785.1, Length 492 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003785.1-201ENST00000544959 ITPK1Q13572 414 aa17.06■□□□□ 0.32
AP003785.1-201ENST00000544959 PKD1L3Q7Z443 1732 aa17.06■□□□□ 0.32
AP003785.1-201ENST00000544959 ITGB4P16144 1822 aa17.05■□□□□ 0.32
AP003785.1-201ENST00000544959 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
AP003785.1-201ENST00000544959 RNF181Q9P0P0 153 aa17.05■□□□□ 0.32
AP003785.1-201ENST00000544959 A0A1W2PP64 1363 aa17.04■□□□□ 0.32
AP003785.1-201ENST00000544959 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
AP003785.1-201ENST00000544959 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
AP003785.1-201ENST00000544959 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
AP003785.1-201ENST00000544959 L3MBTL2Q969R5 705 aa17.04■□□□□ 0.32
AP003785.1-201ENST00000544959 ARFGEF1Q9Y6D6 1849 aa17.03■□□□□ 0.32
AP003785.1-201ENST00000544959 DCAF5Q96JK2 942 aa17.03■□□□□ 0.32
AP003785.1-201ENST00000544959 TNRC6CQ9HCJ0 1690 aaKnown RBP17.03■□□□□ 0.32
AP003785.1-201ENST00000544959 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
AP003785.1-201ENST00000544959 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.32
AP003785.1-201ENST00000544959 TMF1P82094 1093 aa17.01■□□□□ 0.31
AP003785.1-201ENST00000544959 PCDH10Q9P2E7 1040 aa17.01■□□□□ 0.31
AP003785.1-201ENST00000544959 ROCK2O75116 1388 aaKnown RBP17.01■□□□□ 0.31
AP003785.1-201ENST00000544959 SBF1O95248 1867 aa17■□□□□ 0.31
AP003785.1-201ENST00000544959 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
AP003785.1-201ENST00000544959 PIM2Q9P1W9 311 aa17■□□□□ 0.31
AP003785.1-201ENST00000544959 TIMELESSQ9UNS1 1208 aa17■□□□□ 0.31
AP003785.1-201ENST00000544959 ATP6V1AP38606 617 aa16.99■□□□□ 0.31
AP003785.1-201ENST00000544959 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
AP003785.1-201ENST00000544959 NKX1-1Q15270 411 aaPredicted RBP16.99■□□□□ 0.31
AP003785.1-201ENST00000544959 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
AP003785.1-201ENST00000544959 COG3Q96JB2 828 aa16.99■□□□□ 0.31
AP003785.1-201ENST00000544959 ASAP1Q9ULH1 1129 aa16.99■□□□□ 0.31
AP003785.1-201ENST00000544959 C4AP0C0L4 1744 aa16.99■□□□□ 0.31
AP003785.1-201ENST00000544959 GYS1P13807 737 aa16.98■□□□□ 0.31
AP003785.1-201ENST00000544959 DALRD3Q5D0E6 543 aaKnown RBP16.98■□□□□ 0.31
AP003785.1-201ENST00000544959 FOXN1O15353 648 aa16.97■□□□□ 0.31
AP003785.1-201ENST00000544959 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
AP003785.1-201ENST00000544959 ARHGEF1Q92888 912 aaKnown RBP16.97■□□□□ 0.31
AP003785.1-201ENST00000544959 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
AP003785.1-201ENST00000544959 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
AP003785.1-201ENST00000544959 PARP3Q9Y6F1 533 aa16.96■□□□□ 0.31
AP003785.1-201ENST00000544959 GLTPD2A6NH11 291 aa16.95■□□□□ 0.3
AP003785.1-201ENST00000544959 HSP90AB2PQ58FF8 381 aa16.95■□□□□ 0.3
AP003785.1-201ENST00000544959 PRDM10Q9NQV6 1147 aa16.95■□□□□ 0.3
AP003785.1-201ENST00000544959 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
AP003785.1-201ENST00000544959 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
AP003785.1-201ENST00000544959 POTECB2RU33 542 aa16.94■□□□□ 0.3
AP003785.1-201ENST00000544959 CHRNA5P30532 468 aa16.94■□□□□ 0.3
AP003785.1-201ENST00000544959 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
AP003785.1-201ENST00000544959 SLC4A9Q96Q91 983 aa16.94■□□□□ 0.3
AP003785.1-201ENST00000544959 MKRN1Q9UHC7 482 aaKnown RBP16.94■□□□□ 0.3
AP003785.1-201ENST00000544959 RASSF7Q02833 373 aa16.93■□□□□ 0.3
AP003785.1-201ENST00000544959 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
AP003785.1-201ENST00000544959 KDM6AO15550 1401 aaPredicted RBP16.93■□□□□ 0.3
AP003785.1-201ENST00000544959 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
AP003785.1-201ENST00000544959 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
AP003785.1-201ENST00000544959 INSRP06213 1382 aa16.91■□□□□ 0.3
AP003785.1-201ENST00000544959 ADRA2BP18089 450 aa16.91■□□□□ 0.3
AP003785.1-201ENST00000544959 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
AP003785.1-201ENST00000544959 KDRP35968 1356 aa16.9■□□□□ 0.3
AP003785.1-201ENST00000544959 RFC4P35249 363 aa16.9■□□□□ 0.3
AP003785.1-201ENST00000544959 DDR1Q08345 913 aa16.9■□□□□ 0.3
AP003785.1-201ENST00000544959 RC3H1Q5TC82 1133 aaKnown RBP16.9■□□□□ 0.3
AP003785.1-201ENST00000544959 CREBZFQ9NS37 354 aa16.9■□□□□ 0.3
AP003785.1-201ENST00000544959 RPS6KA4O75676 772 aa16.89■□□□□ 0.29
AP003785.1-201ENST00000544959 FYB1O15117 783 aa16.88■□□□□ 0.29
AP003785.1-201ENST00000544959 LMNB1P20700 586 aa16.88■□□□□ 0.29
AP003785.1-201ENST00000544959 FKBP8Q14318 412 aa16.88■□□□□ 0.29
AP003785.1-201ENST00000544959 GGNBP2Q9H3C7 697 aa16.87■□□□□ 0.29
AP003785.1-201ENST00000544959 CNTNAP4Q9C0A0 1308 aa16.87■□□□□ 0.29
AP003785.1-201ENST00000544959 CTCFP49711 727 aaPredicted RBP16.86■□□□□ 0.29
AP003785.1-201ENST00000544959 ABHD8Q96I13 439 aa16.86■□□□□ 0.29
AP003785.1-201ENST00000544959 SIN3AQ96ST3 1273 aa16.86■□□□□ 0.29
AP003785.1-201ENST00000544959 SRP68Q9UHB9 627 aaKnown RBP16.86■□□□□ 0.29
AP003785.1-201ENST00000544959 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
AP003785.1-201ENST00000544959 NCAPD2Q15021 1401 aa16.86■□□□□ 0.29
AP003785.1-201ENST00000544959 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
AP003785.1-201ENST00000544959 PHKG2P15735 406 aa16.85■□□□□ 0.29
AP003785.1-201ENST00000544959 CNTNAP1P78357 1384 aa16.85■□□□□ 0.29
AP003785.1-201ENST00000544959 LBX1P52954 281 aa16.84■□□□□ 0.29
AP003785.1-201ENST00000544959 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
AP003785.1-201ENST00000544959 FLT4P35916 1363 aa16.84■□□□□ 0.29
AP003785.1-201ENST00000544959 ZNF831Q5JPB2 1677 aa16.84■□□□□ 0.29
AP003785.1-201ENST00000544959 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
AP003785.1-201ENST00000544959 POLRMTO00411 1230 aaKnown RBP16.83■□□□□ 0.28
AP003785.1-201ENST00000544959 POTEIP0CG38 1075 aa16.83■□□□□ 0.28
AP003785.1-201ENST00000544959 POTEJP0CG39 1038 aa16.83■□□□□ 0.28
AP003785.1-201ENST00000544959 TM4SF1P30408 202 aa16.83■□□□□ 0.28
AP003785.1-201ENST00000544959 MIER1Q8N108 512 aa16.83■□□□□ 0.28
AP003785.1-201ENST00000544959 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
AP003785.1-201ENST00000544959 WBP1LQ9NX94 342 aa16.83■□□□□ 0.28
AP003785.1-201ENST00000544959 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.83■□□□□ 0.28
AP003785.1-201ENST00000544959 USP42Q9H9J4 1324 aaKnown RBP16.82■□□□□ 0.28
AP003785.1-201ENST00000544959 NFKBIEO00221 500 aa16.82■□□□□ 0.28
AP003785.1-201ENST00000544959 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
AP003785.1-201ENST00000544959 IFNL2Q8IZJ0 200 aa16.82■□□□□ 0.28
AP003785.1-201ENST00000544959 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
AP003785.1-201ENST00000544959 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
AP003785.1-201ENST00000544959 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
AP003785.1-201ENST00000544959 VEGFBP49765 207 aa16.81■□□□□ 0.28
AP003785.1-201ENST00000544959 RGS19P49795 217 aa16.81■□□□□ 0.28
AP003785.1-201ENST00000544959 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
AP003785.1-201ENST00000544959 TIAM2Q8IVF5 1701 aa16.81■□□□□ 0.28
AP003785.1-201ENST00000544959 TONSLQ96HA7 1378 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms