RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 NPC1L1Q9UHC9 1359 aa12.79□□□□□ -0.36
CIT-216ENST00000544872 WNK3Q9BYP7 1800 aa12.78□□□□□ -0.36
CIT-216ENST00000544872 TNRC6CQ9HCJ0 1690 aaKnown RBP12.78□□□□□ -0.36
CIT-216ENST00000544872 DLL1O00548 723 aa12.78□□□□□ -0.36
CIT-216ENST00000544872 FLAD1Q8NFF5 587 aa12.78□□□□□ -0.36
CIT-216ENST00000544872 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
CIT-216ENST00000544872 FLT4P35916 1363 aa12.78□□□□□ -0.36
CIT-216ENST00000544872 CNTNAP1P78357 1384 aa12.78□□□□□ -0.36
CIT-216ENST00000544872 SLIT3O75094 1523 aa12.78□□□□□ -0.36
CIT-216ENST00000544872 VEGFBP49765 207 aa12.77□□□□□ -0.37
CIT-216ENST00000544872 POLKQ9UBT6 870 aa12.77□□□□□ -0.37
CIT-216ENST00000544872 RALBP1Q15311 655 aa12.76□□□□□ -0.37
CIT-216ENST00000544872 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
CIT-216ENST00000544872 NUDCQ9Y266 331 aa12.76□□□□□ -0.37
CIT-216ENST00000544872 PIK3C2AO00443 1686 aa12.76□□□□□ -0.37
CIT-216ENST00000544872 A0A0G2JLW4 131 aa12.75□□□□□ -0.37
CIT-216ENST00000544872 ERBB3P21860 1342 aa12.75□□□□□ -0.37
CIT-216ENST00000544872 FBLN1P23142 703 aa12.75□□□□□ -0.37
CIT-216ENST00000544872 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
CIT-216ENST00000544872 EMILIN1Q9Y6C2 1016 aa12.75□□□□□ -0.37
CIT-216ENST00000544872 MON2Q7Z3U7 1717 aa12.74□□□□□ -0.37
CIT-216ENST00000544872 INSRP06213 1382 aa12.74□□□□□ -0.37
CIT-216ENST00000544872 MTHFSP49914 203 aa12.74□□□□□ -0.37
CIT-216ENST00000544872 GCC1Q96CN9 775 aa12.74□□□□□ -0.37
CIT-216ENST00000544872 BEGAINQ9BUH8 593 aa12.74□□□□□ -0.37
CIT-216ENST00000544872 IL2RBP14784 551 aa12.73□□□□□ -0.37
CIT-216ENST00000544872 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
CIT-216ENST00000544872 ANP32CO43423 234 aa12.72□□□□□ -0.37
CIT-216ENST00000544872 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
CIT-216ENST00000544872 NEFMP07197 916 aa12.72□□□□□ -0.37
CIT-216ENST00000544872 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
CIT-216ENST00000544872 MCOLN1Q9GZU1 580 aa12.72□□□□□ -0.37
CIT-216ENST00000544872 PKD1L3Q7Z443 1732 aa12.71□□□□□ -0.37
CIT-216ENST00000544872 PHF14O94880 888 aa12.71□□□□□ -0.37
CIT-216ENST00000544872 TGFB2P61812 414 aa12.71□□□□□ -0.37
CIT-216ENST00000544872 SMIM5Q71RC9 77 aa12.71□□□□□ -0.37
CIT-216ENST00000544872 ZNF219Q9P2Y4 722 aaPredicted RBP12.71□□□□□ -0.37
CIT-216ENST00000544872 ABCC6O95255 1503 aa12.71□□□□□ -0.38
CIT-216ENST00000544872 PNNQ9H307 717 aaKnown RBP12.7□□□□□ -0.38
CIT-216ENST00000544872 NFAT5O94916 1531 aa12.7□□□□□ -0.38
CIT-216ENST00000544872 U2SURPO15042 1029 aaKnown RBP12.69□□□□□ -0.38
CIT-216ENST00000544872 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
CIT-216ENST00000544872 SOX10P56693 466 aa12.69□□□□□ -0.38
CIT-216ENST00000544872 DDX54Q8TDD1 881 aaKnown RBP12.69□□□□□ -0.38
CIT-216ENST00000544872 SPG7Q9UQ90 795 aa12.69□□□□□ -0.38
CIT-216ENST00000544872 TNRC18O15417 2968 aaPredicted RBP12.69□□□□□ -0.38
CIT-216ENST00000544872 GLTPD2A6NH11 291 aa12.68□□□□□ -0.38
CIT-216ENST00000544872 PPP2R1AP30153 589 aa12.68□□□□□ -0.38
CIT-216ENST00000544872 EIF4A2Q14240 407 aaKnown RBP12.68□□□□□ -0.38
CIT-216ENST00000544872 NBPF6Q5VWK0 638 aa12.68□□□□□ -0.38
CIT-216ENST00000544872 CHADLQ6NUI6 762 aa12.68□□□□□ -0.38
CIT-216ENST00000544872 AK7Q96M32 723 aa12.68□□□□□ -0.38
CIT-216ENST00000544872 NBPF4Q96M43 638 aa12.68□□□□□ -0.38
CIT-216ENST00000544872 DPEP1P16444 411 aa12.67□□□□□ -0.38
CIT-216ENST00000544872 HMGB2P26583 209 aaKnown RBP12.67□□□□□ -0.38
CIT-216ENST00000544872 ZCRB1Q8TBF4 217 aaKnown RBP12.67□□□□□ -0.38
CIT-216ENST00000544872 COL18A1P39060 1754 aa12.66□□□□□ -0.38
CIT-216ENST00000544872 AMOTQ4VCS5 1084 aa12.66□□□□□ -0.38
CIT-216ENST00000544872 PLEKHO1Q53GL0 409 aaPredicted RBP12.66□□□□□ -0.38
CIT-216ENST00000544872 EYA1Q99502 592 aa12.66□□□□□ -0.38
CIT-216ENST00000544872 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
CIT-216ENST00000544872 MYBBP1AQ9BQG0 1328 aaKnown RBP12.65□□□□□ -0.38
CIT-216ENST00000544872 DGKZQ13574 1117 aa12.65□□□□□ -0.38
CIT-216ENST00000544872 HABP4Q5JVS0 413 aaKnown RBP12.65□□□□□ -0.38
CIT-216ENST00000544872 SULT6B1Q6IMI4 303 aa12.65□□□□□ -0.38
CIT-216ENST00000544872 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
CIT-216ENST00000544872 TMEM88BA6NKF7 163 aa12.64□□□□□ -0.39
CIT-216ENST00000544872 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
CIT-216ENST00000544872 MMP10P09238 476 aa12.64□□□□□ -0.39
CIT-216ENST00000544872 U2AF1L5P0DN76 240 aaPredicted RBP12.64□□□□□ -0.39
CIT-216ENST00000544872 IL13P35225 146 aa12.64□□□□□ -0.39
CIT-216ENST00000544872 U2AF1Q01081 240 aaKnown RBP eCLIP12.64□□□□□ -0.39
CIT-216ENST00000544872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
CIT-216ENST00000544872 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
CIT-216ENST00000544872 ZC3H4Q9UPT8 1303 aaKnown RBP12.63□□□□□ -0.39
CIT-216ENST00000544872 WDR43Q15061 677 aaKnown RBP eCLIP12.63□□□□□ -0.39
CIT-216ENST00000544872 DEFB115Q30KQ5 88 aa12.63□□□□□ -0.39
CIT-216ENST00000544872 C1orf141Q5JVX7 400 aa12.63□□□□□ -0.39
CIT-216ENST00000544872 PRKRIP1Q9H875 184 aaPredicted RBP12.63□□□□□ -0.39
CIT-216ENST00000544872 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
CIT-216ENST00000544872 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
CIT-216ENST00000544872 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.62□□□□□ -0.39
CIT-216ENST00000544872 DALRD3Q5D0E6 543 aaKnown RBP12.62□□□□□ -0.39
CIT-216ENST00000544872 PCDH11XQ9BZA7 1347 aa12.62□□□□□ -0.39
CIT-216ENST00000544872 PCDH11YQ9BZA8 1340 aa12.62□□□□□ -0.39
CIT-216ENST00000544872 WDR33Q9C0J8 1336 aaKnown RBP12.62□□□□□ -0.39
CIT-216ENST00000544872 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
CIT-216ENST00000544872 PAXIP1Q6ZW49 1069 aaPredicted RBP12.61□□□□□ -0.39
CIT-216ENST00000544872 IFNL2Q8IZJ0 200 aa12.61□□□□□ -0.39
CIT-216ENST00000544872 NBPF15Q8N660 670 aa12.61□□□□□ -0.39
CIT-216ENST00000544872 SLC17A8Q8NDX2 589 aa12.61□□□□□ -0.39
CIT-216ENST00000544872 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
CIT-216ENST00000544872 KIF20BQ96Q89 1820 aa12.6□□□□□ -0.39
CIT-216ENST00000544872 LY75O60449 1722 aa12.6□□□□□ -0.39
CIT-216ENST00000544872 GRM1Q13255 1194 aa12.6□□□□□ -0.39
CIT-216ENST00000544872 CCDC87Q9NVE4 849 aa12.6□□□□□ -0.39
CIT-216ENST00000544872 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
CIT-216ENST00000544872 HMOX1P09601 288 aa12.59□□□□□ -0.39
CIT-216ENST00000544872 RASSF7Q02833 373 aa12.59□□□□□ -0.39
CIT-216ENST00000544872 ABT1Q9ULW3 272 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms