RNA–Protein interactions for RNA: ENST00000544805.1

RNF10-222, Transcript of ring finger protein 10, human

TSL 2

Gene RNF10, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-222	ENST00000544805	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.53	□□□□□ -0.56
RNF10-222	ENST00000544805	BTG4	Q9NY30	223 aa		11.53	□□□□□ -0.56
RNF10-222	ENST00000544805	TERF2IP	Q9NYB0	399 aa		11.53	□□□□□ -0.56
RNF10-222	ENST00000544805	POLR3A	O14802	1390 aa	Predicted RBP	11.53	□□□□□ -0.56
RNF10-222	ENST00000544805	FAM83G	A6ND36	823 aa		11.52	□□□□□ -0.57
RNF10-222	ENST00000544805	APBB1	O00213	710 aa		11.52	□□□□□ -0.57
RNF10-222	ENST00000544805	NEUROD2	Q15784	382 aa		11.52	□□□□□ -0.57
RNF10-222	ENST00000544805	STRN4	Q9NRL3	753 aa		11.52	□□□□□ -0.57
RNF10-222	ENST00000544805	WDR70	Q9NW82	654 aa		11.52	□□□□□ -0.57
RNF10-222	ENST00000544805	RIPOR2	Q9Y4F9	1068 aa		11.52	□□□□□ -0.57
RNF10-222	ENST00000544805	KTN1	Q86UP2	1357 aa	Known RBP	11.52	□□□□□ -0.57
RNF10-222	ENST00000544805		G3V3G9	751 aa		11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	PDE4A	P27815	886 aa		11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	CHRNA2	Q15822	529 aa		11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	CDCA8	Q53HL2	280 aa		11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	GJD4	Q96KN9	370 aa	Predicted RBP	11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	CRISPLD2	Q9H0B8	497 aa		11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	USP47	Q96K76	1375 aa		11.51	□□□□□ -0.57
RNF10-222	ENST00000544805	TTC36	A6NLP5	189 aa		11.5	□□□□□ -0.57
RNF10-222	ENST00000544805	AEBP1	Q8IUX7	1158 aa		11.5	□□□□□ -0.57
RNF10-222	ENST00000544805	BRD4	O60885	1362 aa	Predicted RBP	11.5	□□□□□ -0.57
RNF10-222	ENST00000544805	ANP32A	P39687	249 aa	Known RBP	11.49	□□□□□ -0.57
RNF10-222	ENST00000544805	NBPF20	Q3BBV1	942 aa		11.49	□□□□□ -0.57
RNF10-222	ENST00000544805	CASC1	Q6TDU7	716 aa		11.49	□□□□□ -0.57
RNF10-222	ENST00000544805	NBPF11	Q86T75	865 aa		11.49	□□□□□ -0.57
RNF10-222	ENST00000544805	LARP6	Q9BRS8	491 aa	Known RBP	11.49	□□□□□ -0.57
RNF10-222	ENST00000544805	SLC12A5	Q9H2X9	1139 aa		11.49	□□□□□ -0.57
RNF10-222	ENST00000544805	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.49	□□□□□ -0.57
RNF10-222	ENST00000544805	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	C11orf95	C9JLR9	678 aa	Predicted RBP	11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	VPS72	Q15906	364 aa		11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	ANKRD13A	Q8IZ07	590 aa		11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	TTC21B	Q7Z4L5	1316 aa		11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	KIAA0232	Q92628	1395 aa		11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	SBNO2	Q9Y2G9	1366 aa		11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	USP6	P35125	1406 aa		11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	TOPAZ1	Q8N9V7	1692 aa		11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	MARF1	Q9Y4F3	1742 aa	Known RBP	11.48	□□□□□ -0.57
RNF10-222	ENST00000544805	BCL9L	Q86UU0	1499 aa		11.47	□□□□□ -0.57
RNF10-222	ENST00000544805	ATRN	O75882	1429 aa		11.47	□□□□□ -0.57
RNF10-222	ENST00000544805	TTC21A	Q8NDW8	1320 aa		11.47	□□□□□ -0.57
RNF10-222	ENST00000544805	GC	P02774	474 aa		11.47	□□□□□ -0.57
RNF10-222	ENST00000544805	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
RNF10-222	ENST00000544805	KCNH5	Q8NCM2	988 aa		11.47	□□□□□ -0.57
RNF10-222	ENST00000544805	MYH16	Q9H6N6	1097 aa		11.47	□□□□□ -0.57
RNF10-222	ENST00000544805	ALS2	Q96Q42	1657 aa		11.46	□□□□□ -0.57
RNF10-222	ENST00000544805	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.46	□□□□□ -0.57
RNF10-222	ENST00000544805	MFSD10	Q14728	455 aa		11.46	□□□□□ -0.57
RNF10-222	ENST00000544805	NOP58	Q9Y2X3	529 aa	Known RBP	11.46	□□□□□ -0.57
RNF10-222	ENST00000544805	RGS12	O14924	1447 aa		11.45	□□□□□ -0.58
RNF10-222	ENST00000544805	CSB-PGBD3	P0DP91	1061 aa		11.45	□□□□□ -0.58
RNF10-222	ENST00000544805	FAM98C	Q17RN3	349 aa	Known RBP	11.45	□□□□□ -0.58
RNF10-222	ENST00000544805	NOL8	Q76FK4	1167 aa	Known RBP	11.45	□□□□□ -0.58
RNF10-222	ENST00000544805	SEPT12	Q8IYM1	358 aa		11.45	□□□□□ -0.58
RNF10-222	ENST00000544805	GPHN	Q9NQX3	736 aa	Predicted RBP	11.45	□□□□□ -0.58
RNF10-222	ENST00000544805	SLIT2	O94813	1529 aa		11.45	□□□□□ -0.58
RNF10-222	ENST00000544805	SF3B2	Q13435	895 aa	Known RBP	11.44	□□□□□ -0.58
RNF10-222	ENST00000544805	TESK2	Q96S53	571 aa		11.44	□□□□□ -0.58
RNF10-222	ENST00000544805	COL14A1	Q05707	1796 aa	Known RBP	11.44	□□□□□ -0.58
RNF10-222	ENST00000544805	ERCC3	P19447	782 aa		11.43	□□□□□ -0.58
RNF10-222	ENST00000544805	CALR	P27797	417 aa	Known RBP	11.43	□□□□□ -0.58
RNF10-222	ENST00000544805	TSHZ1	Q6ZSZ6	1077 aa		11.43	□□□□□ -0.58
RNF10-222	ENST00000544805	NME9	Q86XW9	330 aa		11.43	□□□□□ -0.58
RNF10-222	ENST00000544805	DDX27	Q96GQ7	796 aa	Known RBP	11.43	□□□□□ -0.58
RNF10-222	ENST00000544805	HDAC5	Q9UQL6	1122 aa		11.43	□□□□□ -0.58
RNF10-222	ENST00000544805	ABCA3	Q99758	1704 aa		11.43	□□□□□ -0.58
RNF10-222	ENST00000544805	PLCH1	Q4KWH8	1693 aa		11.43	□□□□□ -0.58
RNF10-222	ENST00000544805	NINL	Q9Y2I6	1382 aa		11.42	□□□□□ -0.58
RNF10-222	ENST00000544805	USP19	O94966	1318 aa		11.42	□□□□□ -0.58
RNF10-222	ENST00000544805	IRX3	P78415	501 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF10-222	ENST00000544805	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF10-222	ENST00000544805	TOM1L2	Q6ZVM7	507 aa		11.42	□□□□□ -0.58
RNF10-222	ENST00000544805	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.42	□□□□□ -0.58	1e-6	■□□□□ 9.2
RNF10-222	ENST00000544805	COG3	Q96JB2	828 aa		11.42	□□□□□ -0.58
RNF10-222	ENST00000544805	GZF1	Q9H116	711 aa	Predicted RBP	11.42	□□□□□ -0.58
RNF10-222	ENST00000544805	FANCI	Q9NVI1	1328 aa		11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	NRDC	O43847	1150 aa		11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	HSPA5	P11021	654 aa	Known RBP	11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	KRT27	Q7Z3Y8	459 aa		11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	TMC2	Q8TDI7	906 aa		11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	PRDM4	Q9UKN5	801 aa		11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	CPSF1	Q10570	1443 aa	Known RBP	11.41	□□□□□ -0.58
RNF10-222	ENST00000544805	NWD2	Q9ULI1	1742 aa		11.4	□□□□□ -0.58
RNF10-222	ENST00000544805	SPATA31A5	Q5VU36	1347 aa		11.4	□□□□□ -0.58
RNF10-222	ENST00000544805	SPATA31A7	Q8IWB4	1347 aa		11.4	□□□□□ -0.58
RNF10-222	ENST00000544805	APP	P05067	770 aa		11.4	□□□□□ -0.58
RNF10-222	ENST00000544805	PDE3B	Q13370	1112 aa		11.4	□□□□□ -0.58
RNF10-222	ENST00000544805	E2F4	Q16254	413 aa		11.4	□□□□□ -0.58
RNF10-222	ENST00000544805	LARP1	Q6PKG0	1096 aa	Known RBP	11.4	□□□□□ -0.58
RNF10-222	ENST00000544805	KCNV2	Q8TDN2	545 aa		11.4	□□□□□ -0.58
RNF10-222	ENST00000544805	EDC4	Q6P2E9	1401 aa	Known RBP	11.4	□□□□□ -0.58
RNF10-222	ENST00000544805		A0A1W2PP64	1363 aa		11.4	□□□□□ -0.59
RNF10-222	ENST00000544805	CPD	O75976	1380 aa		11.4	□□□□□ -0.59
RNF10-222	ENST00000544805	TMEM92	Q6UXU6	159 aa		11.39	□□□□□ -0.59
RNF10-222	ENST00000544805	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	11.39	□□□□□ -0.59
RNF10-222	ENST00000544805	SPATA31A1	Q5TZJ5	1347 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms