RNA–Protein interactions for RNA: ENST00000544179.1

TM7SF3-216, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 2

Gene TM7SF3, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-216ENST00000544179 PCDHGA11Q9Y5H2 935 aa9.49□□□□□ -0.89
TM7SF3-216ENST00000544179 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
TM7SF3-216ENST00000544179 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
TM7SF3-216ENST00000544179 TLR1Q15399 786 aa9.48□□□□□ -0.89
TM7SF3-216ENST00000544179 CNTNAP3BQ96NU0 1288 aa9.48□□□□□ -0.89
TM7SF3-216ENST00000544179 CNTNAP3Q9BZ76 1288 aa9.48□□□□□ -0.89
TM7SF3-216ENST00000544179 H7C1W4 665 aa9.47□□□□□ -0.89
TM7SF3-216ENST00000544179 KRT76Q01546 638 aa9.47□□□□□ -0.89
TM7SF3-216ENST00000544179 DBN1Q16643 649 aa9.47□□□□□ -0.89
TM7SF3-216ENST00000544179 TBC1D9Q6ZT07 1266 aa9.47□□□□□ -0.89
TM7SF3-216ENST00000544179 TRIM22Q8IYM9 498 aa9.47□□□□□ -0.89
TM7SF3-216ENST00000544179 GMCL1Q96IK5 515 aa9.47□□□□□ -0.89
TM7SF3-216ENST00000544179 UCN2Q96RP3 112 aa9.47□□□□□ -0.89
TM7SF3-216ENST00000544179 F11P03951 625 aa9.46□□□□□ -0.9
TM7SF3-216ENST00000544179 SMTNP53814 917 aa9.46□□□□□ -0.9
TM7SF3-216ENST00000544179 GTF2IP78347 998 aa9.46□□□□□ -0.9
TM7SF3-216ENST00000544179 C4orf17Q53FE4 359 aa9.46□□□□□ -0.9
TM7SF3-216ENST00000544179 PPARGC1BQ86YN6 1023 aaKnown RBP9.46□□□□□ -0.9
TM7SF3-216ENST00000544179 GLMNQ92990 594 aa9.46□□□□□ -0.9
TM7SF3-216ENST00000544179 SERTAD1Q9UHV2 236 aa9.46□□□□□ -0.9
TM7SF3-216ENST00000544179 TMEM229AB2RXF0 380 aa9.45□□□□□ -0.9
TM7SF3-216ENST00000544179 ATP9BO43861 1147 aa9.45□□□□□ -0.9
TM7SF3-216ENST00000544179 RNFT1Q5M7Z0 435 aa9.45□□□□□ -0.9
TM7SF3-216ENST00000544179 RHBDD1Q8TEB9 315 aa9.45□□□□□ -0.9
TM7SF3-216ENST00000544179 SLC4A9Q96Q91 983 aa9.45□□□□□ -0.9
TM7SF3-216ENST00000544179 PSME1Q06323 249 aa9.44□□□□□ -0.9
TM7SF3-216ENST00000544179 PLEKHM2Q8IWE5 1019 aa9.44□□□□□ -0.9
TM7SF3-216ENST00000544179 ZNF837Q96EG3 531 aaPredicted RBP9.44□□□□□ -0.9
TM7SF3-216ENST00000544179 A0A1B0GTH6 734 aa9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 USP17L3A6NCW0 530 aa9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 USP17L4A6NCW7 530 aa9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 FAM181BA6NEQ2 426 aa9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 USP17L2Q6R6M4 530 aa9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 USP17L1Q7RTZ2 530 aa9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 TRIM50Q86XT4 487 aa9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 TFIP11Q9UBB9 837 aaKnown RBP9.43□□□□□ -0.9
TM7SF3-216ENST00000544179 GTPBP3Q969Y2 492 aaKnown RBP9.42□□□□□ -0.9
TM7SF3-216ENST00000544179 CALR3Q96L12 384 aaKnown RBP9.42□□□□□ -0.9
TM7SF3-216ENST00000544179 GPAMQ9HCL2 828 aa9.42□□□□□ -0.9
TM7SF3-216ENST00000544179 A6NJY4 79 aa9.41□□□□□ -0.9
TM7SF3-216ENST00000544179 CDK2AP1O14519 115 aa9.41□□□□□ -0.9
TM7SF3-216ENST00000544179 BACH1O14867 736 aa9.41□□□□□ -0.9
TM7SF3-216ENST00000544179 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.41□□□□□ -0.9
TM7SF3-216ENST00000544179 MKRN1Q9UHC7 482 aaKnown RBP9.41□□□□□ -0.9
TM7SF3-216ENST00000544179 GPR25O00155 361 aa9.4□□□□□ -0.9
TM7SF3-216ENST00000544179 ZBTB7BO15156 539 aaPredicted RBP9.4□□□□□ -0.9
TM7SF3-216ENST00000544179 MSX1P28360 303 aa9.4□□□□□ -0.9
TM7SF3-216ENST00000544179 ATP1A2P50993 1020 aa9.4□□□□□ -0.9
TM7SF3-216ENST00000544179 NIFKQ9BYG3 293 aaKnown RBP9.4□□□□□ -0.9
TM7SF3-216ENST00000544179 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
TM7SF3-216ENST00000544179 ZNF358Q9NW07 568 aa9.4□□□□□ -0.9
TM7SF3-216ENST00000544179 CSB-PGBD3P0DP91 1061 aa9.39□□□□□ -0.91
TM7SF3-216ENST00000544179 PLA2G4AP47712 749 aa9.39□□□□□ -0.91
TM7SF3-216ENST00000544179 GAS6Q14393 721 aa9.39□□□□□ -0.91
TM7SF3-216ENST00000544179 MTFR1Q15390 333 aa9.39□□□□□ -0.91
TM7SF3-216ENST00000544179 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
TM7SF3-216ENST00000544179 TRERF1Q96PN7 1200 aa9.39□□□□□ -0.91
TM7SF3-216ENST00000544179 PALM3A6NDB9 673 aaPredicted RBP9.38□□□□□ -0.91
TM7SF3-216ENST00000544179 CLDN10P78369 228 aa9.38□□□□□ -0.91
TM7SF3-216ENST00000544179 CCDC102BQ68D86 513 aa9.38□□□□□ -0.91
TM7SF3-216ENST00000544179 AIDAQ96BJ3 306 aa9.38□□□□□ -0.91
TM7SF3-216ENST00000544179 DNAAF2Q9NVR5 837 aaKnown RBP9.38□□□□□ -0.91
TM7SF3-216ENST00000544179 ZNF777Q9ULD5 760 aaPredicted RBP9.38□□□□□ -0.91
TM7SF3-216ENST00000544179 SLURP2P0DP57 97 aa9.37□□□□□ -0.91
TM7SF3-216ENST00000544179 OGFOD1Q8N543 542 aa9.37□□□□□ -0.91
TM7SF3-216ENST00000544179 TPCN2Q8NHX9 752 aa9.37□□□□□ -0.91
TM7SF3-216ENST00000544179 RUBCNLQ9H714 662 aa9.37□□□□□ -0.91
TM7SF3-216ENST00000544179 IQSEC3Q9UPP2 1182 aaPredicted RBP9.37□□□□□ -0.91
TM7SF3-216ENST00000544179 THBS1P07996 1170 aa9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 SRSF11Q05519 484 aaKnown RBP9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 LBRQ14739 615 aaKnown RBP9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 LARGE2Q8N3Y3 721 aa9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 CABP1Q9NZU7 370 aa9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 KIAA1024Q9UPX6 916 aa9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 MAFBQ9Y5Q3 323 aaPredicted RBP9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
TM7SF3-216ENST00000544179 ADAMTS2O95450 1211 aa9.35□□□□□ -0.91
TM7SF3-216ENST00000544179 ZNF295-AS1Q8N0V1 137 aa9.35□□□□□ -0.91
TM7SF3-216ENST00000544179 SCHIP1Q9P0W5 487 aaPredicted RBP9.35□□□□□ -0.91
TM7SF3-216ENST00000544179 RASA1P20936 1047 aa9.34□□□□□ -0.91
TM7SF3-216ENST00000544179 EFHC2Q5JST6 749 aa9.34□□□□□ -0.91
TM7SF3-216ENST00000544179 ZNF385CQ66K41 422 aaPredicted RBP9.34□□□□□ -0.91
TM7SF3-216ENST00000544179 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
TM7SF3-216ENST00000544179 C1orf216Q8TAB5 229 aa9.34□□□□□ -0.91
TM7SF3-216ENST00000544179 CFHR5Q9BXR6 569 aa9.34□□□□□ -0.91
TM7SF3-216ENST00000544179 MBIPQ9NS73 344 aa9.34□□□□□ -0.91
TM7SF3-216ENST00000544179 WHAMMQ8TF30 809 aa9.33□□□□□ -0.92
TM7SF3-216ENST00000544179 CRISPLD1Q9H336 500 aa9.33□□□□□ -0.92
TM7SF3-216ENST00000544179 RBM19Q9Y4C8 960 aaKnown RBP9.33□□□□□ -0.92
TM7SF3-216ENST00000544179 PARP3Q9Y6F1 533 aa9.33□□□□□ -0.92
TM7SF3-216ENST00000544179 EPHA4P54764 986 aa9.32□□□□□ -0.92
TM7SF3-216ENST00000544179 FOXK2Q01167 660 aa9.32□□□□□ -0.92
TM7SF3-216ENST00000544179 NBPF1Q3BBV0 1214 aa9.32□□□□□ -0.92
TM7SF3-216ENST00000544179 SLC9A9Q8IVB4 645 aa9.32□□□□□ -0.92
TM7SF3-216ENST00000544179 SVOPQ8N4V2 548 aa9.32□□□□□ -0.92
TM7SF3-216ENST00000544179 ZNF594Q96JF6 807 aaPredicted RBP9.32□□□□□ -0.92
TM7SF3-216ENST00000544179 TATP17735 454 aaPredicted RBP9.31□□□□□ -0.92
TM7SF3-216ENST00000544179 MX2P20592 715 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms