RNA–Protein interactions for RNA: ENST00000543729.5

TRIM46-209, Transcript of tripartite motif containing 46, humanhuman

TSL 5 BASIC

Gene TRIM46, Length 1,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-209ENST00000543729 NKX1-1Q15270 411 aaPredicted RBP21.12■□□□□ 0.97
TRIM46-209ENST00000543729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRIM46-209ENST00000543729 WDR43Q15061 677 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRIM46-209ENST00000543729 MSH5O43196 834 aa21.11■□□□□ 0.97
TRIM46-209ENST00000543729 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
TRIM46-209ENST00000543729 KLHL34Q8N239 644 aa21.1■□□□□ 0.97
TRIM46-209ENST00000543729 TAF1LQ8IZX4 1826 aa21.1■□□□□ 0.97
TRIM46-209ENST00000543729 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
TRIM46-209ENST00000543729 CHD4Q14839 1912 aa21.09■□□□□ 0.97
TRIM46-209ENST00000543729 U2AF1L5P0DN76 240 aaPredicted RBP21.09■□□□□ 0.97
TRIM46-209ENST00000543729 U2AF1Q01081 240 aaKnown RBP eCLIP21.09■□□□□ 0.97
TRIM46-209ENST00000543729 PLEKHG2Q9H7P9 1386 aa21.08■□□□□ 0.97
TRIM46-209ENST00000543729 PNISRQ8TF01 805 aaKnown RBP21.08■□□□□ 0.97
TRIM46-209ENST00000543729 PIGBQ92521 554 aa21.08■□□□□ 0.97
TRIM46-209ENST00000543729 IGSF1Q8N6C5 1336 aa21.07■□□□□ 0.96
TRIM46-209ENST00000543729 GPR162Q16538 588 aa21.07■□□□□ 0.96
TRIM46-209ENST00000543729 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
TRIM46-209ENST00000543729 PHKG2P15735 406 aa21.05■□□□□ 0.96
TRIM46-209ENST00000543729 SULT6B1Q6IMI4 303 aa21.05■□□□□ 0.96
TRIM46-209ENST00000543729 TMOD3Q9NYL9 352 aa21.05■□□□□ 0.96
TRIM46-209ENST00000543729 C4BP0C0L5 1744 aa21.05■□□□□ 0.96
TRIM46-209ENST00000543729 AK7Q96M32 723 aa21.04■□□□□ 0.96
TRIM46-209ENST00000543729 HMOX1P09601 288 aa21.04■□□□□ 0.96
TRIM46-209ENST00000543729 PNNQ9H307 717 aaKnown RBP21.04■□□□□ 0.96
TRIM46-209ENST00000543729 NEFMP07197 916 aa21.03■□□□□ 0.96
TRIM46-209ENST00000543729 UTRNP46939 3433 aa21.02■□□□□ 0.96
TRIM46-209ENST00000543729 MSL1Q68DK7 614 aa21.02■□□□□ 0.96
TRIM46-209ENST00000543729 ZNF784Q8NCA9 323 aaPredicted RBP21.02■□□□□ 0.96
TRIM46-209ENST00000543729 LOC102724428A0A0B4J2F2 783 aa21.01■□□□□ 0.95
TRIM46-209ENST00000543729 SIK1P57059 783 aa21.01■□□□□ 0.95
TRIM46-209ENST00000543729 AEBP1Q8IUX7 1158 aa21.01■□□□□ 0.95
TRIM46-209ENST00000543729 NLGN2Q8NFZ4 835 aa21.01■□□□□ 0.95
TRIM46-209ENST00000543729 KDRP35968 1356 aa21■□□□□ 0.95
TRIM46-209ENST00000543729 FCHSD2O94868 740 aa21■□□□□ 0.95
TRIM46-209ENST00000543729 UBR3Q6ZT12 1888 aa20.99■□□□□ 0.95
TRIM46-209ENST00000543729 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
TRIM46-209ENST00000543729 ASAP1Q9ULH1 1129 aa20.98■□□□□ 0.95
TRIM46-209ENST00000543729 PLEKHO1Q53GL0 409 aaPredicted RBP20.98■□□□□ 0.95
TRIM46-209ENST00000543729 ADAMTS8Q9UP79 889 aa20.98■□□□□ 0.95
TRIM46-209ENST00000543729 SSFA2P28290 1259 aa20.97■□□□□ 0.95
TRIM46-209ENST00000543729 PRKAR2BP31323 418 aa20.97■□□□□ 0.95
TRIM46-209ENST00000543729 MAPK8IP3Q9UPT6 1336 aa20.97■□□□□ 0.95
TRIM46-209ENST00000543729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.96■□□□□ 0.95
TRIM46-209ENST00000543729 ERVV-2B6SEH9 535 aa20.96■□□□□ 0.95
TRIM46-209ENST00000543729 PHF14O94880 888 aa20.96■□□□□ 0.95
TRIM46-209ENST00000543729 AMOTQ4VCS5 1084 aa20.96■□□□□ 0.95
TRIM46-209ENST00000543729 LINC00116Q8NCU8 138 aa20.96■□□□□ 0.95
TRIM46-209ENST00000543729 RSPH6AQ9H0K4 717 aa20.96■□□□□ 0.95
TRIM46-209ENST00000543729 CD2APQ9Y5K6 639 aa20.96■□□□□ 0.95
TRIM46-209ENST00000543729 ATP6V1AP38606 617 aa20.95■□□□□ 0.94
TRIM46-209ENST00000543729 DCAF5Q96JK2 942 aa20.95■□□□□ 0.94
TRIM46-209ENST00000543729 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
TRIM46-209ENST00000543729 GRIN3BO60391 1043 aa20.95■□□□□ 0.94
TRIM46-209ENST00000543729 AMIGO3Q86WK7 504 aa20.95■□□□□ 0.94
TRIM46-209ENST00000543729 ITPK1Q13572 414 aa20.94■□□□□ 0.94
TRIM46-209ENST00000543729 ZNF530Q6P9A1 599 aaPredicted RBP20.94■□□□□ 0.94
TRIM46-209ENST00000543729 GNPATO15228 680 aa20.92■□□□□ 0.94
TRIM46-209ENST00000543729 TSHZ2Q9NRE2 1034 aa20.92■□□□□ 0.94
TRIM46-209ENST00000543729 ZNF831Q5JPB2 1677 aa20.91■□□□□ 0.94
TRIM46-209ENST00000543729 RNF123Q5XPI4 1314 aa20.91■□□□□ 0.94
TRIM46-209ENST00000543729 YBX3P16989 372 aaKnown RBP eCLIP20.91■□□□□ 0.94
TRIM46-209ENST00000543729 CCDC146Q8IYE0 955 aa20.91■□□□□ 0.94
TRIM46-209ENST00000543729 RUNDC1Q96C34 613 aa20.91■□□□□ 0.94
TRIM46-209ENST00000543729 C1orf141Q5JVX7 400 aa20.9■□□□□ 0.94
TRIM46-209ENST00000543729 SMIM5Q71RC9 77 aa20.9■□□□□ 0.94
TRIM46-209ENST00000543729 CABP4P57796 275 aa20.9■□□□□ 0.94
TRIM46-209ENST00000543729 PPP4R2Q9NY27 417 aa20.9■□□□□ 0.94
TRIM46-209ENST00000543729 KDM6AO15550 1401 aaPredicted RBP20.89■□□□□ 0.93
TRIM46-209ENST00000543729 GAS2L2Q8NHY3 880 aa20.89■□□□□ 0.93
TRIM46-209ENST00000543729 RBM42Q9BTD8 480 aaKnown RBP20.89■□□□□ 0.93
TRIM46-209ENST00000543729 GOLGB1Q14789 3259 aaKnown RBP20.88■□□□□ 0.93
TRIM46-209ENST00000543729 PLEKHF1Q96S99 279 aa20.88■□□□□ 0.93
TRIM46-209ENST00000543729 RC3H1Q5TC82 1133 aaKnown RBP20.87■□□□□ 0.93
TRIM46-209ENST00000543729 PHACTR3Q96KR7 559 aa20.87■□□□□ 0.93
TRIM46-209ENST00000543729 RTCBQ9Y3I0 505 aaKnown RBP20.87■□□□□ 0.93
TRIM46-209ENST00000543729 SLC4A9Q96Q91 983 aa20.86■□□□□ 0.93
TRIM46-209ENST00000543729 MTHFSDQ2M296 383 aaKnown RBP20.85■□□□□ 0.93
TRIM46-209ENST00000543729 TRAPPC3LQ5T215 181 aa20.85■□□□□ 0.93
TRIM46-209ENST00000543729 COL5A3P25940 1745 aaPredicted RBP20.85■□□□□ 0.93
TRIM46-209ENST00000543729 CNTNAP4Q9C0A0 1308 aa20.85■□□□□ 0.93
TRIM46-209ENST00000543729 ADRA2BP18089 450 aa20.84■□□□□ 0.93
TRIM46-209ENST00000543729 NFE2L2Q16236 605 aa20.83■□□□□ 0.92
TRIM46-209ENST00000543729 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
TRIM46-209ENST00000543729 NLGN1Q8N2Q7 840 aa20.82■□□□□ 0.92
TRIM46-209ENST00000543729 NFATC2IPQ8NCF5 419 aa20.82■□□□□ 0.92
TRIM46-209ENST00000543729 APAF1O14727 1248 aa20.81■□□□□ 0.92
TRIM46-209ENST00000543729 RPS6KA4O75676 772 aa20.81■□□□□ 0.92
TRIM46-209ENST00000543729 MMP10P09238 476 aa20.81■□□□□ 0.92
TRIM46-209ENST00000543729 C1QTNF8P60827 252 aa20.81■□□□□ 0.92
TRIM46-209ENST00000543729 SCN11AQ9UI33 1791 aa20.81■□□□□ 0.92
TRIM46-209ENST00000543729 NEUROD2Q15784 382 aa20.81■□□□□ 0.92
TRIM46-209ENST00000543729 RTF1Q92541 710 aaKnown RBP20.81■□□□□ 0.92
TRIM46-209ENST00000543729 GNAT3A8MTJ3 354 aa20.8■□□□□ 0.92
TRIM46-209ENST00000543729 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
TRIM46-209ENST00000543729 GIGYF1O75420 1035 aaPredicted RBP20.8■□□□□ 0.92
TRIM46-209ENST00000543729 TMPOP42166 694 aaKnown RBP20.8■□□□□ 0.92
TRIM46-209ENST00000543729 LMOD3Q0VAK6 560 aa20.8■□□□□ 0.92
TRIM46-209ENST00000543729 ARHGEF1Q92888 912 aaKnown RBP20.8■□□□□ 0.92
TRIM46-209ENST00000543729 RFC4P35249 363 aa20.79■□□□□ 0.92
TRIM46-209ENST00000543729 RIPK4P57078 832 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms