RNA–Protein interactions for RNA: ENST00000543615.1

FAM60A-208, Transcript of Protein FAM60A, humanhuman

TSL 5

Gene FAM60A, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60A-208ENST00000543615 COL23A1Q86Y22 540 aaPredicted RBP24.44■■□□□ 1.5
FAM60A-208ENST00000543615 SSFA2P28290 1259 aa24.43■■□□□ 1.5
FAM60A-208ENST00000543615 AEBP1Q8IUX7 1158 aa24.42■■□□□ 1.5
FAM60A-208ENST00000543615 MSH5O43196 834 aa24.41■■□□□ 1.5
FAM60A-208ENST00000543615 DIAPH1O60610 1272 aaKnown RBP24.41■■□□□ 1.5
FAM60A-208ENST00000543615 CC2D1BQ5T0F9 858 aaKnown RBP24.41■■□□□ 1.5
FAM60A-208ENST00000543615 ATG3Q9NT62 314 aa24.41■■□□□ 1.5
FAM60A-208ENST00000543615 ASAP1Q9ULH1 1129 aa24.41■■□□□ 1.5
FAM60A-208ENST00000543615 COL3A1P02461 1466 aaPredicted RBP24.4■■□□□ 1.5
FAM60A-208ENST00000543615 MRC1P22897 1456 aa24.4■■□□□ 1.5
FAM60A-208ENST00000543615 ATP6V1AP38606 617 aa24.39■■□□□ 1.49
FAM60A-208ENST00000543615 AKAP4Q5JQC9 854 aa24.39■■□□□ 1.49
FAM60A-208ENST00000543615 MYH14Q7Z406 1995 aaKnown RBP24.38■■□□□ 1.49
FAM60A-208ENST00000543615 YY1P25490 414 aa24.38■■□□□ 1.49
FAM60A-208ENST00000543615 CABP4P57796 275 aa24.38■■□□□ 1.49
FAM60A-208ENST00000543615 TJP1Q07157 1748 aa24.37■■□□□ 1.49
FAM60A-208ENST00000543615 C4AP0C0L4 1744 aa24.36■■□□□ 1.49
FAM60A-208ENST00000543615 LINC00116Q8NCU8 138 aa24.36■■□□□ 1.49
FAM60A-208ENST00000543615 KIF13BQ9NQT8 1826 aa24.35■■□□□ 1.49
FAM60A-208ENST00000543615 CNTNAP4Q9C0A0 1308 aa24.35■■□□□ 1.49
FAM60A-208ENST00000543615 UBR2Q8IWV8 1755 aa24.34■■□□□ 1.49
FAM60A-208ENST00000543615 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.34■■□□□ 1.49
FAM60A-208ENST00000543615 ADRA2BP18089 450 aa24.34■■□□□ 1.49
FAM60A-208ENST00000543615 RC3H1Q5TC82 1133 aaKnown RBP24.34■■□□□ 1.49
FAM60A-208ENST00000543615 ITPK1Q13572 414 aa24.33■■□□□ 1.49
FAM60A-208ENST00000543615 SIPA1L3O60292 1781 aaPredicted RBP24.32■■□□□ 1.48
FAM60A-208ENST00000543615 GNPATO15228 680 aa24.32■■□□□ 1.48
FAM60A-208ENST00000543615 CFAP53Q96M91 514 aa24.31■■□□□ 1.48
FAM60A-208ENST00000543615 CD2APQ9Y5K6 639 aa24.31■■□□□ 1.48
FAM60A-208ENST00000543615 RBM42Q9BTD8 480 aaKnown RBP24.3■■□□□ 1.48
FAM60A-208ENST00000543615 RTCBQ9Y3I0 505 aaKnown RBP24.3■■□□□ 1.48
FAM60A-208ENST00000543615 HMOX1P09601 288 aa24.29■■□□□ 1.48
FAM60A-208ENST00000543615 KLHL34Q8N239 644 aa24.29■■□□□ 1.48
FAM60A-208ENST00000543615 PHF14O94880 888 aa24.28■■□□□ 1.48
FAM60A-208ENST00000543615 NFATC2IPQ8NCF5 419 aa24.28■■□□□ 1.48
FAM60A-208ENST00000543615 SLC52A2Q9HAB3 445 aa24.28■■□□□ 1.48
FAM60A-208ENST00000543615 MSL1Q68DK7 614 aa24.27■■□□□ 1.48
FAM60A-208ENST00000543615 GPR162Q16538 588 aa24.26■■□□□ 1.47
FAM60A-208ENST00000543615 GAS2L2Q8NHY3 880 aa24.26■■□□□ 1.47
FAM60A-208ENST00000543615 SLC4A9Q96Q91 983 aa24.26■■□□□ 1.47
FAM60A-208ENST00000543615 RNMTO43148 476 aaKnown RBP24.25■■□□□ 1.47
FAM60A-208ENST00000543615 RPS6KA4O75676 772 aa24.25■■□□□ 1.47
FAM60A-208ENST00000543615 TRAPPC3LQ5T215 181 aa24.25■■□□□ 1.47
FAM60A-208ENST00000543615 AMIGO3Q86WK7 504 aa24.25■■□□□ 1.47
FAM60A-208ENST00000543615 MTHFSDQ2M296 383 aaKnown RBP24.24■■□□□ 1.47
FAM60A-208ENST00000543615 NUDCQ9Y266 331 aa24.24■■□□□ 1.47
FAM60A-208ENST00000543615 GRIN3BO60391 1043 aa24.23■■□□□ 1.47
FAM60A-208ENST00000543615 NLGN1Q8N2Q7 840 aa24.23■■□□□ 1.47
FAM60A-208ENST00000543615 KCPQ6ZWJ8 1503 aa24.22■■□□□ 1.47
FAM60A-208ENST00000543615 U2SURPO15042 1029 aaKnown RBP24.22■■□□□ 1.47
FAM60A-208ENST00000543615 NLGN2Q8NFZ4 835 aa24.22■■□□□ 1.47
FAM60A-208ENST00000543615 PTCD1O75127 700 aaKnown RBP24.2■■□□□ 1.46
FAM60A-208ENST00000543615 VSIG10Q8N0Z9 540 aa24.2■■□□□ 1.46
FAM60A-208ENST00000543615 KIAA1551Q9HCM1 1747 aa24.2■■□□□ 1.46
FAM60A-208ENST00000543615 BRCA1P38398 1863 aaKnown RBP24.19■■□□□ 1.46
FAM60A-208ENST00000543615 RFC4P35249 363 aa24.19■■□□□ 1.46
FAM60A-208ENST00000543615 CRKLP46109 303 aaKnown RBP24.19■■□□□ 1.46
FAM60A-208ENST00000543615 GNAT3A8MTJ3 354 aa24.18■■□□□ 1.46
FAM60A-208ENST00000543615 PPP2R1AP30153 589 aa24.18■■□□□ 1.46
FAM60A-208ENST00000543615 LGR6Q9HBX8 967 aa24.18■■□□□ 1.46
FAM60A-208ENST00000543615 ARHGEF1Q92888 912 aaKnown RBP24.17■■□□□ 1.46
FAM60A-208ENST00000543615 DLG5Q8TDM6 1919 aa24.16■■□□□ 1.46
FAM60A-208ENST00000543615 RSPH6AQ9H0K4 717 aa24.15■■□□□ 1.46
FAM60A-208ENST00000543615 CEMIPQ8WUJ3 1361 aa24.15■■□□□ 1.46
FAM60A-208ENST00000543615 ARFGEF1Q9Y6D6 1849 aa24.14■■□□□ 1.46
FAM60A-208ENST00000543615 N4BP2Q86UW6 1770 aaPredicted RBP24.14■■□□□ 1.46
FAM60A-208ENST00000543615 FCHSD2O94868 740 aa24.14■■□□□ 1.45
FAM60A-208ENST00000543615 MMP10P09238 476 aa24.14■■□□□ 1.45
FAM60A-208ENST00000543615 TEFQ10587 303 aa24.14■■□□□ 1.45
FAM60A-208ENST00000543615 CNGB1Q14028 1251 aaPredicted RBP24.14■■□□□ 1.45
FAM60A-208ENST00000543615 C10orf71Q711Q0 1435 aa24.14■■□□□ 1.45
FAM60A-208ENST00000543615 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.45
FAM60A-208ENST00000543615 CCDC87Q9NVE4 849 aa24.14■■□□□ 1.45
FAM60A-208ENST00000543615 GYS1P13807 737 aa24.13■■□□□ 1.45
FAM60A-208ENST00000543615 TTC5Q8N0Z6 440 aa24.13■■□□□ 1.45
FAM60A-208ENST00000543615 SMIM5Q71RC9 77 aa24.12■■□□□ 1.45
FAM60A-208ENST00000543615 USP42Q9H9J4 1324 aaKnown RBP24.11■■□□□ 1.45
FAM60A-208ENST00000543615 PRKAR2BP31323 418 aa24.11■■□□□ 1.45
FAM60A-208ENST00000543615 AFDNP55196 1824 aaKnown RBP24.1■■□□□ 1.45
FAM60A-208ENST00000543615 YBX3P16989 372 aaKnown RBP eCLIP24.1■■□□□ 1.45
FAM60A-208ENST00000543615 TGFB2P61812 414 aa24.1■■□□□ 1.45
FAM60A-208ENST00000543615 INTS5Q6P9B9 1019 aaKnown RBP24.1■■□□□ 1.45
FAM60A-208ENST00000543615 DNAJC10Q8IXB1 793 aa24.1■■□□□ 1.45
FAM60A-208ENST00000543615 ZNF784Q8NCA9 323 aaPredicted RBP24.1■■□□□ 1.45
FAM60A-208ENST00000543615 TEX13AQ9BXU3 409 aaPredicted RBP24.1■■□□□ 1.45
FAM60A-208ENST00000543615 PARP3Q9Y6F1 533 aa24.1■■□□□ 1.45
FAM60A-208ENST00000543615 NRXN2Q9P2S2 1712 aa24.1■■□□□ 1.45
FAM60A-208ENST00000543615 SOS1Q07889 1333 aaPredicted RBP24.1■■□□□ 1.45
FAM60A-208ENST00000543615 U2AF1L5P0DN76 240 aaPredicted RBP24.09■■□□□ 1.45
FAM60A-208ENST00000543615 CYP19A1P11511 503 aaPredicted RBP24.09■■□□□ 1.45
FAM60A-208ENST00000543615 U2AF1Q01081 240 aaKnown RBP eCLIP24.09■■□□□ 1.45
FAM60A-208ENST00000543615 SCN7AQ01118 1682 aa24.08■■□□□ 1.45
FAM60A-208ENST00000543615 PXDNLA1KZ92 1463 aa24.08■■□□□ 1.45
FAM60A-208ENST00000543615 UTRNP46939 3433 aa24.08■■□□□ 1.45
FAM60A-208ENST00000543615 SLC39A6Q13433 755 aa24.08■■□□□ 1.45
FAM60A-208ENST00000543615 IL17REQ8NFR9 667 aa24.08■■□□□ 1.45
FAM60A-208ENST00000543615 COL15A1P39059 1388 aa24.07■■□□□ 1.44
FAM60A-208ENST00000543615 HTATSF1O43719 755 aaKnown RBP24.07■■□□□ 1.44
FAM60A-208ENST00000543615 STARD3NLO95772 234 aa24.07■■□□□ 1.44
FAM60A-208ENST00000543615 ZNF790Q6PG37 636 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 338 ms