RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, human

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTF2H3-212	ENST00000543341	CHL1	O00533	1208 aa		9.54	□□□□□ -0.88
GTF2H3-212	ENST00000543341	IL17RE	Q8NFR9	667 aa		9.54	□□□□□ -0.88
GTF2H3-212	ENST00000543341	APAF1	O14727	1248 aa		9.53	□□□□□ -0.88
GTF2H3-212	ENST00000543341	IFT57	Q9NWB7	429 aa		9.53	□□□□□ -0.88
GTF2H3-212	ENST00000543341	NRXN2	Q9P2S2	1712 aa		9.53	□□□□□ -0.88
GTF2H3-212	ENST00000543341	NEFM	P07197	916 aa		9.53	□□□□□ -0.88
GTF2H3-212	ENST00000543341	GJD4	Q96KN9	370 aa	Predicted RBP	9.53	□□□□□ -0.88
GTF2H3-212	ENST00000543341	EP400	Q96L91	3159 aa		9.53	□□□□□ -0.88
GTF2H3-212	ENST00000543341	HMOX1	P09601	288 aa		9.53	□□□□□ -0.88
GTF2H3-212	ENST00000543341	PXDNL	A1KZ92	1463 aa		9.52	□□□□□ -0.89
GTF2H3-212	ENST00000543341	GNAT3	A8MTJ3	354 aa		9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	LMOD3	Q0VAK6	560 aa		9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	USHBP1	Q8N6Y0	703 aa		9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	CFAP44	Q96MT7	982 aa		9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	MYH14	Q7Z406	1995 aa	Known RBP	9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	ERVV-2	B6SEH9	535 aa		9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	NPM3	O75607	178 aa	Known RBP	9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	PLEKHO1	Q53GL0	409 aa	Predicted RBP	9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	CCDC146	Q8IYE0	955 aa		9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	TRPC5	Q9UL62	973 aa	Predicted RBP	9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	RNMT	O43148	476 aa	Known RBP	9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	CT47B1	P0C2W7	299 aa	Predicted RBP	9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	USP21	Q9UK80	565 aa		9.51	□□□□□ -0.89
GTF2H3-212	ENST00000543341	DCAF5	Q96JK2	942 aa		9.5	□□□□□ -0.89
GTF2H3-212	ENST00000543341	SPG7	Q9UQ90	795 aa		9.5	□□□□□ -0.89
GTF2H3-212	ENST00000543341	ZNF772	Q68DY9	489 aa	Predicted RBP	9.5	□□□□□ -0.89
GTF2H3-212	ENST00000543341	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	9.5	□□□□□ -0.89
GTF2H3-212	ENST00000543341		E9PSI1	815 aa		9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	TULP1	O00294	542 aa	Predicted RBP	9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	U2SURP	O15042	1029 aa	Known RBP	9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	TAT	P17735	454 aa	Predicted RBP	9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	TPRN	Q4KMQ1	711 aa		9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	LMOD2	Q6P5Q4	547 aa		9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	ZCRB1	Q8TBF4	217 aa	Known RBP	9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	PPM1G	O15355	546 aa	Predicted RBP	9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	RIPK4	P57078	832 aa		9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	IFNL2	Q8IZJ0	200 aa		9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	MARCH10	Q8NA82	808 aa	Predicted RBP	9.49	□□□□□ -0.89
GTF2H3-212	ENST00000543341	SOX12	O15370	315 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	HOXB7	P09629	217 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	SLC52A2	Q9HAB3	445 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	HSP90AB1	P08238	724 aa	Known RBP	9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	TOM1L2	Q6ZVM7	507 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	LRP10	Q7Z4F1	713 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	MAPK8IP3	Q9UPT6	1336 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	NUP98	P52948	1817 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	PLEKHG5	O94827	1062 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	ADAMTS2	O95450	1211 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	IL27	Q8NEV9	243 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	C8orf37	Q96NL8	207 aa		9.48	□□□□□ -0.89
GTF2H3-212	ENST00000543341	KIF13B	Q9NQT8	1826 aa		9.47	□□□□□ -0.89
GTF2H3-212	ENST00000543341		A0A1B0GUL6	1792 aa		9.47	□□□□□ -0.89
GTF2H3-212	ENST00000543341	CALD1	Q05682	793 aa	Known RBP	9.47	□□□□□ -0.89
GTF2H3-212	ENST00000543341	GOLGA2	Q08379	1002 aa		9.47	□□□□□ -0.89
GTF2H3-212	ENST00000543341	EXOC6	Q8TAG9	804 aa		9.47	□□□□□ -0.89
GTF2H3-212	ENST00000543341	ZNF428	Q96B54	188 aa		9.47	□□□□□ -0.89
GTF2H3-212	ENST00000543341	NLRP2	Q9NX02	1062 aa		9.47	□□□□□ -0.89
GTF2H3-212	ENST00000543341	AFDN	P55196	1824 aa	Known RBP	9.47	□□□□□ -0.89
GTF2H3-212	ENST00000543341	LGR6	Q9HBX8	967 aa		9.46	□□□□□ -0.89
GTF2H3-212	ENST00000543341	DDX60	Q8IY21	1712 aa	Known RBP	9.46	□□□□□ -0.89
GTF2H3-212	ENST00000543341	RAPGEF4	Q8WZA2	1011 aa		9.46	□□□□□ -0.9
GTF2H3-212	ENST00000543341	MBIP	Q9NS73	344 aa		9.46	□□□□□ -0.9
GTF2H3-212	ENST00000543341	RCAN3	Q9UKA8	241 aa		9.46	□□□□□ -0.9
GTF2H3-212	ENST00000543341	RBM6	P78332	1123 aa	Known RBP	9.46	□□□□□ -0.9
GTF2H3-212	ENST00000543341	KIAA1551	Q9HCM1	1747 aa		9.45	□□□□□ -0.9
GTF2H3-212	ENST00000543341	CDCA7L	Q96GN5	454 aa		9.45	□□□□□ -0.9
GTF2H3-212	ENST00000543341	NGLY1	Q96IV0	654 aa		9.45	□□□□□ -0.9
GTF2H3-212	ENST00000543341	DLEC1	Q9Y238	1755 aa		9.45	□□□□□ -0.9
GTF2H3-212	ENST00000543341	NUTM2B	A6NNL0	878 aa	Predicted RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	NUTM2E	B1AL46	878 aa	Predicted RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	GNAI1	P63096	354 aa		9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	ZNF530	Q6P9A1	599 aa	Predicted RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	NUTM2A	Q8IVF1	878 aa	Predicted RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	VSIG10	Q8N0Z9	540 aa		9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	LTV1	Q96GA3	475 aa	Predicted RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	RRP1	P56182	461 aa	Known RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	EIF4A1	P60842	406 aa	Known RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	ILDR1	Q86SU0	546 aa	Predicted RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	PLIN1	O60240	522 aa		9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	EVA1C	P58658	441 aa		9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	TAF7	Q15545	349 aa	Predicted RBP	9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	POTEA	Q6S8J7	498 aa		9.44	□□□□□ -0.9
GTF2H3-212	ENST00000543341	MCM10	Q7L590	875 aa		9.43	□□□□□ -0.9
GTF2H3-212	ENST00000543341	STRN4	Q9NRL3	753 aa		9.43	□□□□□ -0.9
GTF2H3-212	ENST00000543341	PLCB2	Q00722	1185 aa		9.43	□□□□□ -0.9
GTF2H3-212	ENST00000543341	ALDH1L2	Q3SY69	923 aa		9.43	□□□□□ -0.9
GTF2H3-212	ENST00000543341	QTRT2	Q9H974	415 aa	Known RBP	9.43	□□□□□ -0.9
GTF2H3-212	ENST00000543341	ATP10D	Q9P241	1426 aa		9.43	□□□□□ -0.9
GTF2H3-212	ENST00000543341	LRP5	O75197	1615 aa		9.43	□□□□□ -0.9
GTF2H3-212	ENST00000543341	VAMP4	O75379	141 aa		9.43	□□□□□ -0.9
GTF2H3-212	ENST00000543341	RRP7A	Q9Y3A4	280 aa	Known RBP	9.42	□□□□□ -0.9
GTF2H3-212	ENST00000543341	RGL2	O15211	777 aa		9.42	□□□□□ -0.9
GTF2H3-212	ENST00000543341	HAP1	P54257	671 aa	Predicted RBP	9.42	□□□□□ -0.9
GTF2H3-212	ENST00000543341	MYH16	Q9H6N6	1097 aa		9.42	□□□□□ -0.9
GTF2H3-212	ENST00000543341	DDB1	Q16531	1140 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	ERBB4	Q15303	1308 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	DCTN1	Q14203	1278 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	PDIA6	Q15084	440 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	KLHL34	Q8N239	644 aa		9.41	□□□□□ -0.9
GTF2H3-212	ENST00000543341	MYH3	P11055	1940 aa		9.41	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms