RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 BMP2P12643 396 aa10.88□□□□□ -0.67
PAAF1-212ENST00000543079 DHX9Q08211 1270 aaKnown RBP10.88□□□□□ -0.67
PAAF1-212ENST00000543079 LCE2CQ5TA81 110 aa10.88□□□□□ -0.67
PAAF1-212ENST00000543079 TSEN34Q9BSV6 310 aaKnown RBP10.88□□□□□ -0.67
PAAF1-212ENST00000543079 FHOD3Q2V2M9 1422 aa10.87□□□□□ -0.67
PAAF1-212ENST00000543079 UHRF1BP1Q6BDS2 1440 aa10.87□□□□□ -0.67
PAAF1-212ENST00000543079 GJD4Q96KN9 370 aaPredicted RBP10.87□□□□□ -0.67
PAAF1-212ENST00000543079 ARHGEF40Q8TER5 1519 aa10.87□□□□□ -0.67
PAAF1-212ENST00000543079 NBPF20Q3BBV1 942 aa10.86□□□□□ -0.67
PAAF1-212ENST00000543079 INTS6LQ5JSJ4 861 aaKnown RBP10.86□□□□□ -0.67
PAAF1-212ENST00000543079 Q6ZVU0 165 aa10.86□□□□□ -0.67
PAAF1-212ENST00000543079 BANK1Q8NDB2 785 aa10.86□□□□□ -0.67
PAAF1-212ENST00000543079 ABCA9Q8IUA7 1624 aa10.86□□□□□ -0.67
PAAF1-212ENST00000543079 DZIP3Q86Y13 1208 aaKnown RBP10.85□□□□□ -0.67
PAAF1-212ENST00000543079 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
PAAF1-212ENST00000543079 SOBPA7XYQ1 873 aa10.84□□□□□ -0.67
PAAF1-212ENST00000543079 PIP4K2BP78356 416 aa10.84□□□□□ -0.67
PAAF1-212ENST00000543079 MED1Q15648 1581 aaPredicted RBP10.84□□□□□ -0.67
PAAF1-212ENST00000543079 TTC37Q6PGP7 1564 aa10.84□□□□□ -0.67
PAAF1-212ENST00000543079 SIGLEC1Q9BZZ2 1709 aa10.84□□□□□ -0.67
PAAF1-212ENST00000543079 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
PAAF1-212ENST00000543079 PREX1Q8TCU6 1659 aa10.83□□□□□ -0.68
PAAF1-212ENST00000543079 H3BM21 787 aa10.83□□□□□ -0.68
PAAF1-212ENST00000543079 MAN1A2O60476 641 aa10.83□□□□□ -0.68
PAAF1-212ENST00000543079 CBLBQ13191 982 aa10.83□□□□□ -0.68
PAAF1-212ENST00000543079 IRF7Q92985 503 aa10.82□□□□□ -0.68
PAAF1-212ENST00000543079 ZFYVE16Q7Z3T8 1539 aa10.81□□□□□ -0.68
PAAF1-212ENST00000543079 ZBBXA8MT70 800 aa10.81□□□□□ -0.68
PAAF1-212ENST00000543079 VEGFBP49765 207 aa10.81□□□□□ -0.68
PAAF1-212ENST00000543079 ARHGEF12Q9NZN5 1544 aa10.8□□□□□ -0.68
PAAF1-212ENST00000543079 ESPNB1AK53 854 aa10.8□□□□□ -0.68
PAAF1-212ENST00000543079 INSM1Q01101 510 aaPredicted RBP10.8□□□□□ -0.68
PAAF1-212ENST00000543079 FER1L4A9Z1Z3 1794 aa10.8□□□□□ -0.68
PAAF1-212ENST00000543079 FMN1Q68DA7 1419 aa10.79□□□□□ -0.68
PAAF1-212ENST00000543079 NCOA1Q15788 1441 aa10.78□□□□□ -0.68
PAAF1-212ENST00000543079 SPINT1O43278 529 aa10.78□□□□□ -0.68
PAAF1-212ENST00000543079 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
PAAF1-212ENST00000543079 TMPRSS4Q9NRS4 437 aa10.78□□□□□ -0.68
PAAF1-212ENST00000543079 DNMT3LQ9UJW3 386 aa10.78□□□□□ -0.68
PAAF1-212ENST00000543079 ATP10AO60312 1499 aa10.78□□□□□ -0.68
PAAF1-212ENST00000543079 MAGI2Q86UL8 1455 aa10.78□□□□□ -0.68
PAAF1-212ENST00000543079 ERVH48-1M5A8F1 160 aa10.77□□□□□ -0.69
PAAF1-212ENST00000543079 FBXO45P0C2W1 286 aa10.77□□□□□ -0.69
PAAF1-212ENST00000543079 MTMR14Q8NCE2 650 aa10.77□□□□□ -0.69
PAAF1-212ENST00000543079 RICTORQ6R327 1708 aa10.77□□□□□ -0.69
PAAF1-212ENST00000543079 PLEKHD1A6NEE1 506 aa10.76□□□□□ -0.69
PAAF1-212ENST00000543079 TTLL8A6PVC2 850 aa10.76□□□□□ -0.69
PAAF1-212ENST00000543079 TOM1O60784 492 aa10.76□□□□□ -0.69
PAAF1-212ENST00000543079 GMPRP36959 345 aa10.76□□□□□ -0.69
PAAF1-212ENST00000543079 RAB15P59190 212 aa10.76□□□□□ -0.69
PAAF1-212ENST00000543079 ZNF784Q8NCA9 323 aaPredicted RBP10.76□□□□□ -0.69
PAAF1-212ENST00000543079 RGS17Q9UGC6 210 aaPredicted RBP10.76□□□□□ -0.69
PAAF1-212ENST00000543079 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
PAAF1-212ENST00000543079 CASKIN1Q8WXD9 1431 aa10.75□□□□□ -0.69
PAAF1-212ENST00000543079 NUP153P49790 1475 aaKnown RBP10.75□□□□□ -0.69
PAAF1-212ENST00000543079 ZMYM4Q5VZL5 1548 aa10.75□□□□□ -0.69
PAAF1-212ENST00000543079 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.75□□□□□ -0.69
PAAF1-212ENST00000543079 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
PAAF1-212ENST00000543079 ERBB4Q15303 1308 aa10.75□□□□□ -0.69
PAAF1-212ENST00000543079 TRAPPC8Q9Y2L5 1435 aa10.75□□□□□ -0.69
PAAF1-212ENST00000543079 HECW1Q76N89 1606 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 RAPGEF6Q8TEU7 1601 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 APBB1O00213 710 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 LILRA1O75019 489 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 ADD1P35611 737 aaKnown RBP10.74□□□□□ -0.69
PAAF1-212ENST00000543079 MCCD1P59942 119 aaPredicted RBP10.74□□□□□ -0.69
PAAF1-212ENST00000543079 TRIM52Q96A61 297 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 AGBL1Q96MI9 1066 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 PCDHB9Q9Y5E1 797 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 C9orf84Q5VXU9 1444 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 SCAPERQ9BY12 1400 aa10.74□□□□□ -0.69
PAAF1-212ENST00000543079 SETD1BQ9UPS6 1966 aaKnown RBP10.74□□□□□ -0.69
PAAF1-212ENST00000543079 PPFIA3O75145 1194 aa10.73□□□□□ -0.69
PAAF1-212ENST00000543079 GIGYF1O75420 1035 aaPredicted RBP10.73□□□□□ -0.69
PAAF1-212ENST00000543079 RELBQ01201 579 aa10.73□□□□□ -0.69
PAAF1-212ENST00000543079 NR1H3Q13133 447 aa10.73□□□□□ -0.69
PAAF1-212ENST00000543079 CCDC125Q86Z20 511 aa10.73□□□□□ -0.69
PAAF1-212ENST00000543079 ESF1Q9H501 851 aaKnown RBP10.73□□□□□ -0.69
PAAF1-212ENST00000543079 NDUFB9Q9Y6M9 179 aa10.73□□□□□ -0.69
PAAF1-212ENST00000543079 GPR37L1O60883 481 aa10.72□□□□□ -0.69
PAAF1-212ENST00000543079 ADH1AP07327 375 aa10.72□□□□□ -0.69
PAAF1-212ENST00000543079 VSIG8P0DPA2 414 aa10.72□□□□□ -0.69
PAAF1-212ENST00000543079 FYCO1Q9BQS8 1478 aa10.72□□□□□ -0.69
PAAF1-212ENST00000543079 FIGNL2A6NMB9 653 aa10.71□□□□□ -0.69
PAAF1-212ENST00000543079 ZNF592Q92610 1267 aa10.71□□□□□ -0.69
PAAF1-212ENST00000543079 STK17AQ9UEE5 414 aa10.71□□□□□ -0.69
PAAF1-212ENST00000543079 CTSOP43234 321 aaPredicted RBP10.7□□□□□ -0.7
PAAF1-212ENST00000543079 ZNF330Q9Y3S2 320 aaPredicted RBP10.7□□□□□ -0.7
PAAF1-212ENST00000543079 CAMSAP1Q5T5Y3 1602 aa10.69□□□□□ -0.7
PAAF1-212ENST00000543079 PTSQ03393 145 aa10.69□□□□□ -0.7
PAAF1-212ENST00000543079 RNF20Q5VTR2 975 aa10.69□□□□□ -0.7
PAAF1-212ENST00000543079 AFAP1Q8N556 730 aa10.69□□□□□ -0.7
PAAF1-212ENST00000543079 KDF1Q8NAX2 398 aaPredicted RBP10.69□□□□□ -0.7
PAAF1-212ENST00000543079 INSM2Q96T92 566 aaPredicted RBP10.69□□□□□ -0.7
PAAF1-212ENST00000543079 ZNF395Q9H8N7 513 aaPredicted RBP10.69□□□□□ -0.7
PAAF1-212ENST00000543079 CDK13Q14004 1512 aaKnown RBP10.68□□□□□ -0.7
PAAF1-212ENST00000543079 LRRIQ1Q96JM4 1722 aa10.68□□□□□ -0.7
PAAF1-212ENST00000543079 PTGIRP43119 386 aa10.68□□□□□ -0.7
PAAF1-212ENST00000543079 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
PAAF1-212ENST00000543079 POTEAQ6S8J7 498 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms