RNA–Protein interactions for RNA: ENST00000542761.5

PTPN6-218, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 2

Gene PTPN6, Length 795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-218ENST00000542761 LINC00116Q8NCU8 138 aa22.74■■□□□ 1.23
PTPN6-218ENST00000542761 AK7Q96M32 723 aa22.74■■□□□ 1.23
PTPN6-218ENST00000542761 ARXQ96QS3 562 aa22.74■■□□□ 1.23
PTPN6-218ENST00000542761 HMGB2P26583 209 aaKnown RBP22.73■■□□□ 1.23
PTPN6-218ENST00000542761 ATP6V1AP38606 617 aa22.73■■□□□ 1.23
PTPN6-218ENST00000542761 AKAP4Q5JQC9 854 aa22.73■■□□□ 1.23
PTPN6-218ENST00000542761 FHDC1Q9C0D6 1143 aaPredicted RBP22.73■■□□□ 1.23
PTPN6-218ENST00000542761 PPP2R1AP30153 589 aa22.72■■□□□ 1.23
PTPN6-218ENST00000542761 AMIGO3Q86WK7 504 aa22.72■■□□□ 1.23
PTPN6-218ENST00000542761 POLD1P28340 1107 aa22.71■■□□□ 1.23
PTPN6-218ENST00000542761 MTHFSDQ2M296 383 aaKnown RBP22.71■■□□□ 1.23
PTPN6-218ENST00000542761 SMIM5Q71RC9 77 aa22.71■■□□□ 1.23
PTPN6-218ENST00000542761 CFAP53Q96M91 514 aa22.71■■□□□ 1.23
PTPN6-218ENST00000542761 RBM42Q9BTD8 480 aaKnown RBP22.71■■□□□ 1.23
PTPN6-218ENST00000542761 PHF14O94880 888 aa22.7■■□□□ 1.22
PTPN6-218ENST00000542761 MSL1Q68DK7 614 aa22.7■■□□□ 1.22
PTPN6-218ENST00000542761 NFATC2IPQ8NCF5 419 aa22.7■■□□□ 1.22
PTPN6-218ENST00000542761 SLC4A9Q96Q91 983 aa22.7■■□□□ 1.22
PTPN6-218ENST00000542761 ZNF831Q5JPB2 1677 aa22.7■■□□□ 1.22
PTPN6-218ENST00000542761 FLAD1Q8NFF5 587 aa22.69■■□□□ 1.22
PTPN6-218ENST00000542761 SYT17Q9BSW7 474 aa22.69■■□□□ 1.22
PTPN6-218ENST00000542761 COL5A3P25940 1745 aaPredicted RBP22.68■■□□□ 1.22
PTPN6-218ENST00000542761 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
PTPN6-218ENST00000542761 ADAMTS7Q9UKP4 1686 aa22.68■■□□□ 1.22
PTPN6-218ENST00000542761 MRC1P22897 1456 aa22.67■■□□□ 1.22
PTPN6-218ENST00000542761 KLHL34Q8N239 644 aa22.67■■□□□ 1.22
PTPN6-218ENST00000542761 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.66■■□□□ 1.22
PTPN6-218ENST00000542761 GNPATO15228 680 aa22.66■■□□□ 1.22
PTPN6-218ENST00000542761 RNMTO43148 476 aaKnown RBP22.66■■□□□ 1.22
PTPN6-218ENST00000542761 PTCD1O75127 700 aaKnown RBP22.66■■□□□ 1.22
PTPN6-218ENST00000542761 SLC52A2Q9HAB3 445 aa22.65■■□□□ 1.22
PTPN6-218ENST00000542761 MAP3K5Q99683 1374 aa22.64■■□□□ 1.22
PTPN6-218ENST00000542761 SSFA2P28290 1259 aa22.64■■□□□ 1.21
PTPN6-218ENST00000542761 TJP1Q07157 1748 aa22.64■■□□□ 1.21
PTPN6-218ENST00000542761 DCAF8L1A6NGE4 600 aa22.63■■□□□ 1.21
PTPN6-218ENST00000542761 NUDCQ9Y266 331 aa22.63■■□□□ 1.21
PTPN6-218ENST00000542761 MYH14Q7Z406 1995 aaKnown RBP22.62■■□□□ 1.21
PTPN6-218ENST00000542761 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
PTPN6-218ENST00000542761 RSPH6AQ9H0K4 717 aa22.62■■□□□ 1.21
PTPN6-218ENST00000542761 U2AF1L5P0DN76 240 aaPredicted RBP22.61■■□□□ 1.21
PTPN6-218ENST00000542761 U2AF1Q01081 240 aaKnown RBP eCLIP22.61■■□□□ 1.21
PTPN6-218ENST00000542761 GAS2L2Q8NHY3 880 aa22.61■■□□□ 1.21
PTPN6-218ENST00000542761 CICQ96RK0 1608 aaPredicted RBP22.6■■□□□ 1.21
PTPN6-218ENST00000542761 CNTNAP4Q9C0A0 1308 aa22.59■■□□□ 1.21
PTPN6-218ENST00000542761 SLC39A6Q13433 755 aa22.59■■□□□ 1.21
PTPN6-218ENST00000542761 PHACTR3Q96KR7 559 aa22.59■■□□□ 1.21
PTPN6-218ENST00000542761 RC3H1Q5TC82 1133 aaKnown RBP22.58■■□□□ 1.21
PTPN6-218ENST00000542761 RTCBQ9Y3I0 505 aaKnown RBP22.58■■□□□ 1.21
PTPN6-218ENST00000542761 KCPQ6ZWJ8 1503 aa22.57■■□□□ 1.2
PTPN6-218ENST00000542761 GNAT3A8MTJ3 354 aa22.57■■□□□ 1.2
PTPN6-218ENST00000542761 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
PTPN6-218ENST00000542761 NLGN2Q8NFZ4 835 aa22.57■■□□□ 1.2
PTPN6-218ENST00000542761 C4AP0C0L4 1744 aa22.57■■□□□ 1.2
PTPN6-218ENST00000542761 SIPA1L3O60292 1781 aaPredicted RBP22.56■■□□□ 1.2
PTPN6-218ENST00000542761 UBR2Q8IWV8 1755 aa22.56■■□□□ 1.2
PTPN6-218ENST00000542761 IL17REQ8NFR9 667 aa22.56■■□□□ 1.2
PTPN6-218ENST00000542761 UTRNP46939 3433 aa22.56■■□□□ 1.2
PTPN6-218ENST00000542761 CRKLP46109 303 aaKnown RBP22.55■■□□□ 1.2
PTPN6-218ENST00000542761 TRAPPC3LQ5T215 181 aa22.55■■□□□ 1.2
PTPN6-218ENST00000542761 RPS6KA4O75676 772 aa22.54■■□□□ 1.2
PTPN6-218ENST00000542761 TEFQ10587 303 aa22.54■■□□□ 1.2
PTPN6-218ENST00000542761 DNAJC10Q8IXB1 793 aa22.54■■□□□ 1.2
PTPN6-218ENST00000542761 ARHGEF1Q92888 912 aaKnown RBP22.53■■□□□ 1.2
PTPN6-218ENST00000542761 FCHSD2O94868 740 aa22.52■■□□□ 1.2
PTPN6-218ENST00000542761 ADRA2BP18089 450 aa22.52■■□□□ 1.2
PTPN6-218ENST00000542761 GOLGB1Q14789 3259 aaKnown RBP22.51■■□□□ 1.19
PTPN6-218ENST00000542761 CEMIPQ8WUJ3 1361 aa22.5■■□□□ 1.19
PTPN6-218ENST00000542761 YY1P25490 414 aa22.5■■□□□ 1.19
PTPN6-218ENST00000542761 RFC4P35249 363 aa22.5■■□□□ 1.19
PTPN6-218ENST00000542761 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
PTPN6-218ENST00000542761 TTC5Q8N0Z6 440 aa22.5■■□□□ 1.19
PTPN6-218ENST00000542761 GPR162Q16538 588 aa22.49■■□□□ 1.19
PTPN6-218ENST00000542761 INTS5Q6P9B9 1019 aaKnown RBP22.49■■□□□ 1.19
PTPN6-218ENST00000542761 MMP10P09238 476 aa22.48■■□□□ 1.19
PTPN6-218ENST00000542761 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
PTPN6-218ENST00000542761 RALBP1Q15311 655 aa22.48■■□□□ 1.19
PTPN6-218ENST00000542761 CCDC87Q9NVE4 849 aa22.48■■□□□ 1.19
PTPN6-218ENST00000542761 CD2APQ9Y5K6 639 aa22.48■■□□□ 1.19
PTPN6-218ENST00000542761 GYS1P13807 737 aa22.47■■□□□ 1.19
PTPN6-218ENST00000542761 ZNF790Q6PG37 636 aa22.46■■□□□ 1.19
PTPN6-218ENST00000542761 MCM10Q7L590 875 aa22.46■■□□□ 1.19
PTPN6-218ENST00000542761 VSIG10Q8N0Z9 540 aa22.46■■□□□ 1.19
PTPN6-218ENST00000542761 RTF1Q92541 710 aaKnown RBP22.46■■□□□ 1.19
PTPN6-218ENST00000542761 ZNF496Q96IT1 587 aaPredicted RBP22.46■■□□□ 1.19
PTPN6-218ENST00000542761 SRP68Q9UHB9 627 aaKnown RBP22.46■■□□□ 1.19
PTPN6-218ENST00000542761 CHD4Q14839 1912 aa22.46■■□□□ 1.19
PTPN6-218ENST00000542761 DLG5Q8TDM6 1919 aa22.46■■□□□ 1.19
PTPN6-218ENST00000542761 NLGN1Q8N2Q7 840 aa22.45■■□□□ 1.18
PTPN6-218ENST00000542761 SOS1Q07889 1333 aaPredicted RBP22.44■■□□□ 1.18
PTPN6-218ENST00000542761 DCTN1Q14203 1278 aa22.44■■□□□ 1.18
PTPN6-218ENST00000542761 ZBTB1Q9Y2K1 713 aa22.44■■□□□ 1.18
PTPN6-218ENST00000542761 HEG1Q9ULI3 1381 aa22.43■■□□□ 1.18
PTPN6-218ENST00000542761 USP42Q9H9J4 1324 aaKnown RBP22.43■■□□□ 1.18
PTPN6-218ENST00000542761 BTBD11A6QL63 1104 aa22.43■■□□□ 1.18
PTPN6-218ENST00000542761 KCNQ3O43525 872 aa22.42■■□□□ 1.18
PTPN6-218ENST00000542761 NEFMP07197 916 aa22.42■■□□□ 1.18
PTPN6-218ENST00000542761 COL15A1P39059 1388 aa22.41■■□□□ 1.18
PTPN6-218ENST00000542761 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
PTPN6-218ENST00000542761 YBX3P16989 372 aaKnown RBP eCLIP22.41■■□□□ 1.18
PTPN6-218ENST00000542761 PLEKHF1Q96S99 279 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms