RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 ZCRB1Q8TBF4 217 aaKnown RBP20.31■□□□□ 0.84
USP5-207ENST00000542371 PCDH11XQ9BZA7 1347 aa20.3■□□□□ 0.84
USP5-207ENST00000542371 PCDH11YQ9BZA8 1340 aa20.3■□□□□ 0.84
USP5-207ENST00000542371 CLUAP1Q96AJ1 413 aa20.3■□□□□ 0.84
USP5-207ENST00000542371 CHMP4BQ9H444 224 aaKnown RBP20.3■□□□□ 0.84
USP5-207ENST00000542371 DDX19BQ9UMR2 479 aa20.3■□□□□ 0.84
USP5-207ENST00000542371 TNNQ9UQP3 1299 aa20.3■□□□□ 0.84
USP5-207ENST00000542371 MRC1P22897 1456 aa20.3■□□□□ 0.84
USP5-207ENST00000542371 PTPRCP08575 1304 aa20.29■□□□□ 0.84
USP5-207ENST00000542371 KDM6AO15550 1401 aaPredicted RBP20.29■□□□□ 0.84
USP5-207ENST00000542371 EIF4A1P60842 406 aaKnown RBP20.29■□□□□ 0.84
USP5-207ENST00000542371 CCDC30Q5VVM6 783 aa20.29■□□□□ 0.84
USP5-207ENST00000542371 CYP27B1O15528 508 aa20.28■□□□□ 0.84
USP5-207ENST00000542371 SLC52A2Q9HAB3 445 aa20.28■□□□□ 0.84
USP5-207ENST00000542371 PLCH1Q4KWH8 1693 aa20.28■□□□□ 0.84
USP5-207ENST00000542371 CACNA1FO60840 1977 aa20.28■□□□□ 0.84
USP5-207ENST00000542371 JCADQ9P266 1359 aa20.27■□□□□ 0.84
USP5-207ENST00000542371 NKX1-1Q15270 411 aaPredicted RBP20.27■□□□□ 0.84
USP5-207ENST00000542371 ABCC4O15439 1325 aa20.27■□□□□ 0.83
USP5-207ENST00000542371 STK31Q9BXU1 1019 aa20.26■□□□□ 0.83
USP5-207ENST00000542371 NWD2Q9ULI1 1742 aa20.26■□□□□ 0.83
USP5-207ENST00000542371 HEG1Q9ULI3 1381 aa20.25■□□□□ 0.83
USP5-207ENST00000542371 CENPQQ7L2Z9 268 aaPredicted RBP20.25■□□□□ 0.83
USP5-207ENST00000542371 TMEM57Q8N5G2 664 aa20.25■□□□□ 0.83
USP5-207ENST00000542371 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
USP5-207ENST00000542371 TCERG1O14776 1098 aaKnown RBP20.24■□□□□ 0.83
USP5-207ENST00000542371 SLC4A2P04920 1241 aa20.24■□□□□ 0.83
USP5-207ENST00000542371 DISP2A7MBM2 1401 aa20.24■□□□□ 0.83
USP5-207ENST00000542371 KDM2BQ8NHM5 1336 aa20.24■□□□□ 0.83
USP5-207ENST00000542371 ERVV-2B6SEH9 535 aa20.23■□□□□ 0.83
USP5-207ENST00000542371 ITPRIPQ8IWB1 547 aa20.23■□□□□ 0.83
USP5-207ENST00000542371 CDCA7Q9BWT1 371 aaPredicted RBP20.23■□□□□ 0.83
USP5-207ENST00000542371 SHANK3Q9BYB0 1731 aa20.23■□□□□ 0.83
USP5-207ENST00000542371 THRAP3Q9Y2W1 955 aaKnown RBP20.23■□□□□ 0.83
USP5-207ENST00000542371 ADAMTS2O95450 1211 aa20.22■□□□□ 0.83
USP5-207ENST00000542371 HDGFL1Q5TGJ6 251 aa20.21■□□□□ 0.83
USP5-207ENST00000542371 SLIT2O94813 1529 aa20.21■□□□□ 0.83
USP5-207ENST00000542371 WNK3Q9BYP7 1800 aa20.2■□□□□ 0.82
USP5-207ENST00000542371 KCNQ3O43525 872 aa20.2■□□□□ 0.82
USP5-207ENST00000542371 CABP4P57796 275 aa20.2■□□□□ 0.82
USP5-207ENST00000542371 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
USP5-207ENST00000542371 ZNF790Q6PG37 636 aa20.2■□□□□ 0.82
USP5-207ENST00000542371 NFATC2IPQ8NCF5 419 aa20.2■□□□□ 0.82
USP5-207ENST00000542371 SPATA31A6Q5VVP1 1343 aa20.2■□□□□ 0.82
USP5-207ENST00000542371 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
USP5-207ENST00000542371 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
USP5-207ENST00000542371 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
USP5-207ENST00000542371 RGS12O14924 1447 aa20.19■□□□□ 0.82
USP5-207ENST00000542371 GIGYF1O75420 1035 aaPredicted RBP20.18■□□□□ 0.82
USP5-207ENST00000542371 ZBTB40Q9NUA8 1239 aa20.18■□□□□ 0.82
USP5-207ENST00000542371 ZBTB7BO15156 539 aaPredicted RBP20.17■□□□□ 0.82
USP5-207ENST00000542371 SPATA31A1Q5TZJ5 1347 aa20.17■□□□□ 0.82
USP5-207ENST00000542371 RWDD1Q9H446 243 aaPredicted RBP20.16■□□□□ 0.82
USP5-207ENST00000542371 USP35Q9P2H5 1018 aa20.16■□□□□ 0.82
USP5-207ENST00000542371 FLIIQ13045 1269 aa20.15■□□□□ 0.82
USP5-207ENST00000542371 G2E3Q7L622 706 aa20.15■□□□□ 0.82
USP5-207ENST00000542371 TTC5Q8N0Z6 440 aa20.15■□□□□ 0.82
USP5-207ENST00000542371 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
USP5-207ENST00000542371 PCDHB15Q9Y5E8 787 aa20.15■□□□□ 0.82
USP5-207ENST00000542371 LRP6O75581 1613 aa20.14■□□□□ 0.81
USP5-207ENST00000542371 SPATA31A5Q5VU36 1347 aa20.14■□□□□ 0.81
USP5-207ENST00000542371 SPATA31A7Q8IWB4 1347 aa20.14■□□□□ 0.81
USP5-207ENST00000542371 EXOC5O00471 708 aa20.14■□□□□ 0.81
USP5-207ENST00000542371 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.81
USP5-207ENST00000542371 FMNL2Q96PY5 1086 aa20.14■□□□□ 0.81
USP5-207ENST00000542371 DBF4Q9UBU7 674 aaPredicted RBP20.14■□□□□ 0.81
USP5-207ENST00000542371 PXDNLA1KZ92 1463 aa20.13■□□□□ 0.81
USP5-207ENST00000542371 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
USP5-207ENST00000542371 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
USP5-207ENST00000542371 BARGINQ6ZT62 677 aa20.13■□□□□ 0.81
USP5-207ENST00000542371 UNC5CLQ8IV45 518 aa20.13■□□□□ 0.81
USP5-207ENST00000542371 IGHDP01880 384 aa20.12■□□□□ 0.81
USP5-207ENST00000542371 SLC39A6Q13433 755 aa20.12■□□□□ 0.81
USP5-207ENST00000542371 HDAC1Q13547 482 aaPredicted RBP20.12■□□□□ 0.81
USP5-207ENST00000542371 PAPPAQ13219 1627 aa20.12■□□□□ 0.81
USP5-207ENST00000542371 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
USP5-207ENST00000542371 FKBP5Q13451 457 aaPredicted RBP20.11■□□□□ 0.81
USP5-207ENST00000542371 NECTIN2Q92692 538 aa20.11■□□□□ 0.81
USP5-207ENST00000542371 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
USP5-207ENST00000542371 FNBP4Q8N3X1 1017 aaPredicted RBP20.1■□□□□ 0.81
USP5-207ENST00000542371 ZNF496Q96IT1 587 aaPredicted RBP20.1■□□□□ 0.81
USP5-207ENST00000542371 HYPKQ9NX55 129 aa20.1■□□□□ 0.81
USP5-207ENST00000542371 CHPF2Q9P2E5 772 aa20.1■□□□□ 0.81
USP5-207ENST00000542371 UBR2Q8IWV8 1755 aa20.1■□□□□ 0.81
USP5-207ENST00000542371 VPS72Q15906 364 aa20.09■□□□□ 0.81
USP5-207ENST00000542371 NGLY1Q96IV0 654 aa20.09■□□□□ 0.81
USP5-207ENST00000542371 DDX21Q9NR30 783 aaKnown RBP eCLIP20.09■□□□□ 0.81
USP5-207ENST00000542371 TOGARAM1Q9Y4F4 1720 aa20.09■□□□□ 0.81
USP5-207ENST00000542371 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.08■□□□□ 0.81
USP5-207ENST00000542371 C5P01031 1676 aa20.08■□□□□ 0.81
USP5-207ENST00000542371 TMOD3Q9NYL9 352 aa20.07■□□□□ 0.8
USP5-207ENST00000542371 LAMB4A4D0S4 1761 aa20.07■□□□□ 0.8
USP5-207ENST00000542371 ERBB4Q15303 1308 aa20.06■□□□□ 0.8
USP5-207ENST00000542371 BCL9LQ86UU0 1499 aa20.06■□□□□ 0.8
USP5-207ENST00000542371 HSPA1LP34931 641 aa20.06■□□□□ 0.8
USP5-207ENST00000542371 DDB1Q16531 1140 aa20.06■□□□□ 0.8
USP5-207ENST00000542371 C8orf37Q96NL8 207 aa20.06■□□□□ 0.8
USP5-207ENST00000542371 PHAXQ9H814 394 aaKnown RBP20.06■□□□□ 0.8
USP5-207ENST00000542371 GLI3P10071 1580 aa20.05■□□□□ 0.8
USP5-207ENST00000542371 KCPQ6ZWJ8 1503 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms