RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 ITPK1Q13572 414 aa15.42■□□□□ 0.06
VTN-203ENST00000542029 QSER1Q2KHR3 1735 aa15.42■□□□□ 0.06
VTN-203ENST00000542029 GRIN3BO60391 1043 aa15.41■□□□□ 0.06
VTN-203ENST00000542029 DIAPH1O60610 1272 aaKnown RBP15.41■□□□□ 0.06
VTN-203ENST00000542029 AKAP4Q5JQC9 854 aa15.41■□□□□ 0.06
VTN-203ENST00000542029 CC2D1BQ5T0F9 858 aaKnown RBP15.41■□□□□ 0.06
VTN-203ENST00000542029 RC3H1Q5TC82 1133 aaKnown RBP15.41■□□□□ 0.06
VTN-203ENST00000542029 RBM42Q9BTD8 480 aaKnown RBP15.41■□□□□ 0.06
VTN-203ENST00000542029 ADRA2BP18089 450 aa15.4■□□□□ 0.06
VTN-203ENST00000542029 RTCBQ9Y3I0 505 aaKnown RBP15.4■□□□□ 0.06
VTN-203ENST00000542029 TRAPPC3LQ5T215 181 aa15.39■□□□□ 0.05
VTN-203ENST00000542029 PELP1Q8IZL8 1130 aaKnown RBP15.39■□□□□ 0.05
VTN-203ENST00000542029 NLGN2Q8NFZ4 835 aa15.39■□□□□ 0.05
VTN-203ENST00000542029 KDM6AO15550 1401 aaPredicted RBP15.38■□□□□ 0.05
VTN-203ENST00000542029 AMIGO3Q86WK7 504 aa15.38■□□□□ 0.05
VTN-203ENST00000542029 NFATC2IPQ8NCF5 419 aa15.38■□□□□ 0.05
VTN-203ENST00000542029 CNTNAP4Q9C0A0 1308 aa15.38■□□□□ 0.05
VTN-203ENST00000542029 TOGARAM1Q9Y4F4 1720 aa15.37■□□□□ 0.05
VTN-203ENST00000542029 NLGN1Q8N2Q7 840 aa15.37■□□□□ 0.05
VTN-203ENST00000542029 ZNF784Q8NCA9 323 aaPredicted RBP15.37■□□□□ 0.05
VTN-203ENST00000542029 SLC4A9Q96Q91 983 aa15.37■□□□□ 0.05
VTN-203ENST00000542029 RPS6KA4O75676 772 aa15.36■□□□□ 0.05
VTN-203ENST00000542029 HMOX1P09601 288 aa15.36■□□□□ 0.05
VTN-203ENST00000542029 C4BP0C0L5 1744 aa15.36■□□□□ 0.05
VTN-203ENST00000542029 C5P01031 1676 aa15.35■□□□□ 0.05
VTN-203ENST00000542029 UTRNP46939 3433 aa15.35■□□□□ 0.05
VTN-203ENST00000542029 PTCD1O75127 700 aaKnown RBP15.35■□□□□ 0.05
VTN-203ENST00000542029 SLC52A2Q9HAB3 445 aa15.35■□□□□ 0.05
VTN-203ENST00000542029 COL24A1Q17RW2 1714 aa15.34■□□□□ 0.05
VTN-203ENST00000542029 RFC4P35249 363 aa15.34■□□□□ 0.05
VTN-203ENST00000542029 CFAP53Q96M91 514 aa15.34■□□□□ 0.05
VTN-203ENST00000542029 ITGB4P16144 1822 aa15.33■□□□□ 0.05
VTN-203ENST00000542029 RNMTO43148 476 aaKnown RBP15.33■□□□□ 0.04
VTN-203ENST00000542029 SMIM5Q71RC9 77 aa15.33■□□□□ 0.04
VTN-203ENST00000542029 ARHGEF1Q92888 912 aaKnown RBP15.33■□□□□ 0.04
VTN-203ENST00000542029 MMP10P09238 476 aa15.32■□□□□ 0.04
VTN-203ENST00000542029 MTHFSDQ2M296 383 aaKnown RBP15.32■□□□□ 0.04
VTN-203ENST00000542029 GAS2L2Q8NHY3 880 aa15.32■□□□□ 0.04
VTN-203ENST00000542029 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
VTN-203ENST00000542029 YBX3P16989 372 aaKnown RBP eCLIP15.31■□□□□ 0.04
VTN-203ENST00000542029 CRKLP46109 303 aaKnown RBP15.31■□□□□ 0.04
VTN-203ENST00000542029 LGR6Q9HBX8 967 aa15.31■□□□□ 0.04
VTN-203ENST00000542029 NUDCQ9Y266 331 aa15.31■□□□□ 0.04
VTN-203ENST00000542029 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
VTN-203ENST00000542029 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
VTN-203ENST00000542029 TAF1LQ8IZX4 1826 aa15.29■□□□□ 0.04
VTN-203ENST00000542029 GYS1P13807 737 aa15.29■□□□□ 0.04
VTN-203ENST00000542029 TGFB2P61812 414 aa15.29■□□□□ 0.04
VTN-203ENST00000542029 VSIG10Q8N0Z9 540 aa15.29■□□□□ 0.04
VTN-203ENST00000542029 CCDC87Q9NVE4 849 aa15.29■□□□□ 0.04
VTN-203ENST00000542029 PARP3Q9Y6F1 533 aa15.28■□□□□ 0.04
VTN-203ENST00000542029 GNAT3A8MTJ3 354 aa15.27■□□□□ 0.04
VTN-203ENST00000542029 DNAJC10Q8IXB1 793 aa15.27■□□□□ 0.04
VTN-203ENST00000542029 TTC5Q8N0Z6 440 aa15.27■□□□□ 0.04
VTN-203ENST00000542029 ZNF831Q5JPB2 1677 aa15.26■□□□□ 0.03
VTN-203ENST00000542029 TEFQ10587 303 aa15.26■□□□□ 0.03
VTN-203ENST00000542029 SLC39A6Q13433 755 aa15.26■□□□□ 0.03
VTN-203ENST00000542029 INTS5Q6P9B9 1019 aaKnown RBP15.26■□□□□ 0.03
VTN-203ENST00000542029 UBR3Q6ZT12 1888 aa15.26■□□□□ 0.03
VTN-203ENST00000542029 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
VTN-203ENST00000542029 ZPR1O75312 459 aa15.25■□□□□ 0.03
VTN-203ENST00000542029 STARD3NLO95772 234 aa15.25■□□□□ 0.03
VTN-203ENST00000542029 CYP19A1P11511 503 aaPredicted RBP15.25■□□□□ 0.03
VTN-203ENST00000542029 COL3A1P02461 1466 aaPredicted RBP15.25■□□□□ 0.03
VTN-203ENST00000542029 MRC1P22897 1456 aa15.25■□□□□ 0.03
VTN-203ENST00000542029 PPP2R1AP30153 589 aa15.24■□□□□ 0.03
VTN-203ENST00000542029 TEX13AQ9BXU3 409 aaPredicted RBP15.24■□□□□ 0.03
VTN-203ENST00000542029 GOLGB1Q14789 3259 aaKnown RBP15.23■□□□□ 0.03
VTN-203ENST00000542029 SOS1Q07889 1333 aaPredicted RBP15.23■□□□□ 0.03
VTN-203ENST00000542029 FCHSD2O94868 740 aa15.23■□□□□ 0.03
VTN-203ENST00000542029 PRKAR2BP31323 418 aa15.23■□□□□ 0.03
VTN-203ENST00000542029 IL17REQ8NFR9 667 aa15.23■□□□□ 0.03
VTN-203ENST00000542029 GIGYF1O75420 1035 aaPredicted RBP15.22■□□□□ 0.03
VTN-203ENST00000542029 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
VTN-203ENST00000542029 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.03
VTN-203ENST00000542029 FKBP8Q14318 412 aa15.22■□□□□ 0.03
VTN-203ENST00000542029 ZNF790Q6PG37 636 aa15.22■□□□□ 0.03
VTN-203ENST00000542029 RSPH6AQ9H0K4 717 aa15.22■□□□□ 0.03
VTN-203ENST00000542029 SRP68Q9UHB9 627 aaKnown RBP15.22■□□□□ 0.03
VTN-203ENST00000542029 C10orf71Q711Q0 1435 aa15.21■□□□□ 0.03
VTN-203ENST00000542029 A0A087WZG4 1122 aa15.21■□□□□ 0.03
VTN-203ENST00000542029 C1QTNF8P60827 252 aa15.21■□□□□ 0.03
VTN-203ENST00000542029 NARFQ9UHQ1 456 aa15.21■□□□□ 0.03
VTN-203ENST00000542029 CHD4Q14839 1912 aa15.2■□□□□ 0.02
VTN-203ENST00000542029 RTF1Q92541 710 aaKnown RBP15.2■□□□□ 0.02
VTN-203ENST00000542029 FMNL2Q96PY5 1086 aa15.2■□□□□ 0.02
VTN-203ENST00000542029 ZBTB1Q9Y2K1 713 aa15.2■□□□□ 0.02
VTN-203ENST00000542029 CEMIPQ8WUJ3 1361 aa15.2■□□□□ 0.02
VTN-203ENST00000542029 A0A0G2JLW4 131 aa15.19■□□□□ 0.02
VTN-203ENST00000542029 HTATSF1O43719 755 aaKnown RBP15.19■□□□□ 0.02
VTN-203ENST00000542029 NEFMP07197 916 aa15.19■□□□□ 0.02
VTN-203ENST00000542029 DPEP1P16444 411 aa15.19■□□□□ 0.02
VTN-203ENST00000542029 TM4SF1P30408 202 aa15.19■□□□□ 0.02
VTN-203ENST00000542029 USPL1Q5W0Q7 1092 aa15.19■□□□□ 0.02
VTN-203ENST00000542029 NPM2Q86SE8 214 aaKnown RBP15.19■□□□□ 0.02
VTN-203ENST00000542029 ZNF496Q96IT1 587 aaPredicted RBP15.19■□□□□ 0.02
VTN-203ENST00000542029 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
VTN-203ENST00000542029 WWC3Q9ULE0 1092 aa15.19■□□□□ 0.02
VTN-203ENST00000542029 BCS1LQ9Y276 419 aa15.19■□□□□ 0.02
VTN-203ENST00000542029 PXDNLA1KZ92 1463 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms