RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 ATG3Q9NT62 314 aa26.29■■□□□ 1.8
RAP1B-227ENST00000542018 TMOD3Q9NYL9 352 aa26.29■■□□□ 1.8
RAP1B-227ENST00000542018 ATP6V1AP38606 617 aa26.28■■□□□ 1.8
RAP1B-227ENST00000542018 SLC4A9Q96Q91 983 aa26.27■■□□□ 1.8
RAP1B-227ENST00000542018 KDRP35968 1356 aa26.26■■□□□ 1.79
RAP1B-227ENST00000542018 MMP10P09238 476 aa26.26■■□□□ 1.79
RAP1B-227ENST00000542018 CDCA8Q53HL2 280 aa26.26■■□□□ 1.79
RAP1B-227ENST00000542018 POLKQ9UBT6 870 aa26.26■■□□□ 1.79
RAP1B-227ENST00000542018 IFNL2Q8IZJ0 200 aa26.24■■□□□ 1.79
RAP1B-227ENST00000542018 ZNF831Q5JPB2 1677 aa26.23■■□□□ 1.79
RAP1B-227ENST00000542018 COL5A3P25940 1745 aaPredicted RBP26.22■■□□□ 1.79
RAP1B-227ENST00000542018 BRCA1P38398 1863 aaKnown RBP26.22■■□□□ 1.79
RAP1B-227ENST00000542018 C10orf71Q711Q0 1435 aa26.21■■□□□ 1.79
RAP1B-227ENST00000542018 MYH14Q7Z406 1995 aaKnown RBP26.2■■□□□ 1.79
RAP1B-227ENST00000542018 A0A0G2JLW4 131 aa26.2■■□□□ 1.78
RAP1B-227ENST00000542018 EIF4A2Q14240 407 aaKnown RBP26.2■■□□□ 1.78
RAP1B-227ENST00000542018 C4AP0C0L4 1744 aa26.18■■□□□ 1.78
RAP1B-227ENST00000542018 TGFB2P61812 414 aa26.18■■□□□ 1.78
RAP1B-227ENST00000542018 TRAPPC3LQ5T215 181 aa26.17■■□□□ 1.78
RAP1B-227ENST00000542018 ARHGEF1Q92888 912 aaKnown RBP26.17■■□□□ 1.78
RAP1B-227ENST00000542018 GYS1P13807 737 aa26.16■■□□□ 1.78
RAP1B-227ENST00000542018 BCS1LQ9Y276 419 aa26.16■■□□□ 1.78
RAP1B-227ENST00000542018 RTCBQ9Y3I0 505 aaKnown RBP26.16■■□□□ 1.78
RAP1B-227ENST00000542018 DPEP1P16444 411 aa26.15■■□□□ 1.78
RAP1B-227ENST00000542018 NLGN1Q8N2Q7 840 aa26.15■■□□□ 1.78
RAP1B-227ENST00000542018 KDM6AO15550 1401 aaPredicted RBP26.14■■□□□ 1.78
RAP1B-227ENST00000542018 RC3H1Q5TC82 1133 aaKnown RBP26.14■■□□□ 1.78
RAP1B-227ENST00000542018 DNAJC5GQ8N7S2 189 aa26.14■■□□□ 1.78
RAP1B-227ENST00000542018 PLEKHG2Q9H7P9 1386 aa26.14■■□□□ 1.78
RAP1B-227ENST00000542018 ERVV-2B6SEH9 535 aa26.13■■□□□ 1.77
RAP1B-227ENST00000542018 KCNA3P22001 575 aa26.13■■□□□ 1.77
RAP1B-227ENST00000542018 RBM42Q9BTD8 480 aaKnown RBP26.13■■□□□ 1.77
RAP1B-227ENST00000542018 CNTNAP4Q9C0A0 1308 aa26.13■■□□□ 1.77
RAP1B-227ENST00000542018 NMRK2Q9NPI5 230 aa26.12■■□□□ 1.77
RAP1B-227ENST00000542018 RPS6KA4O75676 772 aa26.11■■□□□ 1.77
RAP1B-227ENST00000542018 TOMM70O94826 608 aa26.11■■□□□ 1.77
RAP1B-227ENST00000542018 ADRA2BP18089 450 aa26.11■■□□□ 1.77
RAP1B-227ENST00000542018 TNNT2P45379 298 aaPredicted RBP26.11■■□□□ 1.77
RAP1B-227ENST00000542018 APLP1P51693 650 aa26.11■■□□□ 1.77
RAP1B-227ENST00000542018 ARHGAP27Q6ZUM4 889 aa26.11■■□□□ 1.77
RAP1B-227ENST00000542018 ARFGEF1Q9Y6D6 1849 aa26.11■■□□□ 1.77
RAP1B-227ENST00000542018 DCAF5Q96JK2 942 aa26.1■■□□□ 1.77
RAP1B-227ENST00000542018 CCDC87Q9NVE4 849 aa26.09■■□□□ 1.77
RAP1B-227ENST00000542018 FCHSD2O94868 740 aa26.07■■□□□ 1.76
RAP1B-227ENST00000542018 RFC4P35249 363 aa26.07■■□□□ 1.76
RAP1B-227ENST00000542018 TJP1Q07157 1748 aa26.05■■□□□ 1.76
RAP1B-227ENST00000542018 PARP3Q9Y6F1 533 aa26.05■■□□□ 1.76
RAP1B-227ENST00000542018 ADAMTS7Q9UKP4 1686 aa26.05■■□□□ 1.76
RAP1B-227ENST00000542018 HSP90AB1P08238 724 aaKnown RBP26.04■■□□□ 1.76
RAP1B-227ENST00000542018 ZNF530Q6P9A1 599 aaPredicted RBP26.04■■□□□ 1.76
RAP1B-227ENST00000542018 SRP68Q9UHB9 627 aaKnown RBP26.04■■□□□ 1.76
RAP1B-227ENST00000542018 WDR90Q96KV7 1748 aa26.04■■□□□ 1.76
RAP1B-227ENST00000542018 CABP4P57796 275 aa26.03■■□□□ 1.76
RAP1B-227ENST00000542018 DDR1Q08345 913 aa26.03■■□□□ 1.76
RAP1B-227ENST00000542018 PLEKHO1Q53GL0 409 aaPredicted RBP26.03■■□□□ 1.76
RAP1B-227ENST00000542018 C9orf131Q5VYM1 1079 aa26.03■■□□□ 1.76
RAP1B-227ENST00000542018 AEBP1Q8IUX7 1158 aa26.03■■□□□ 1.76
RAP1B-227ENST00000542018 PTCD1O75127 700 aaKnown RBP26.02■■□□□ 1.76
RAP1B-227ENST00000542018 CRKLP46109 303 aaKnown RBP26.02■■□□□ 1.76
RAP1B-227ENST00000542018 FKBP8Q14318 412 aa26.02■■□□□ 1.76
RAP1B-227ENST00000542018 SBF1O95248 1867 aa26.01■■□□□ 1.75
RAP1B-227ENST00000542018 USP42Q9H9J4 1324 aaKnown RBP26■■□□□ 1.75
RAP1B-227ENST00000542018 TRIM26Q12899 539 aaPredicted RBP26■■□□□ 1.75
RAP1B-227ENST00000542018 HTRA3P83110 453 aa25.99■■□□□ 1.75
RAP1B-227ENST00000542018 AMOTQ4VCS5 1084 aa25.99■■□□□ 1.75
RAP1B-227ENST00000542018 NFATC2IPQ8NCF5 419 aa25.99■■□□□ 1.75
RAP1B-227ENST00000542018 RBM46Q8TBY0 533 aaKnown RBP25.99■■□□□ 1.75
RAP1B-227ENST00000542018 PIM2Q9P1W9 311 aa25.99■■□□□ 1.75
RAP1B-227ENST00000542018 KCPQ6ZWJ8 1503 aa25.98■■□□□ 1.75
RAP1B-227ENST00000542018 MTHFSP49914 203 aa25.98■■□□□ 1.75
RAP1B-227ENST00000542018 INTS5Q6P9B9 1019 aaKnown RBP25.98■■□□□ 1.75
RAP1B-227ENST00000542018 POLR3GLQ9BT43 218 aa25.98■■□□□ 1.75
RAP1B-227ENST00000542018 PCNTO95613 3336 aa25.98■■□□□ 1.75
RAP1B-227ENST00000542018 SCN11AQ9UI33 1791 aa25.97■■□□□ 1.75
RAP1B-227ENST00000542018 CHRNA5P30532 468 aa25.97■■□□□ 1.75
RAP1B-227ENST00000542018 TM4SF1P30408 202 aa25.95■■□□□ 1.74
RAP1B-227ENST00000542018 DALRD3Q5D0E6 543 aaKnown RBP25.95■■□□□ 1.74
RAP1B-227ENST00000542018 PANK3Q9H999 370 aa25.95■■□□□ 1.74
RAP1B-227ENST00000542018 POLRMTO00411 1230 aaKnown RBP25.94■■□□□ 1.74
RAP1B-227ENST00000542018 RNF181Q9P0P0 153 aa25.93■■□□□ 1.74
RAP1B-227ENST00000542018 C1orf141Q5JVX7 400 aa25.92■■□□□ 1.74
RAP1B-227ENST00000542018 TIMELESSQ9UNS1 1208 aa25.92■■□□□ 1.74
RAP1B-227ENST00000542018 AFDNP55196 1824 aaKnown RBP25.92■■□□□ 1.74
RAP1B-227ENST00000542018 SULT6B1Q6IMI4 303 aa25.91■■□□□ 1.74
RAP1B-227ENST00000542018 KLRG1Q96E93 195 aa25.91■■□□□ 1.74
RAP1B-227ENST00000542018 TNRC6CQ9HCJ0 1690 aaKnown RBP25.9■■□□□ 1.74
RAP1B-227ENST00000542018 FSTL1Q12841 308 aa25.9■■□□□ 1.74
RAP1B-227ENST00000542018 JMYQ8N9B5 988 aa25.9■■□□□ 1.74
RAP1B-227ENST00000542018 RRAGCQ9HB90 399 aa25.9■■□□□ 1.74
RAP1B-227ENST00000542018 NRXN2Q9P2S2 1712 aa25.89■■□□□ 1.74
RAP1B-227ENST00000542018 IL13P35225 146 aa25.89■■□□□ 1.74
RAP1B-227ENST00000542018 DNAJC10Q8IXB1 793 aa25.89■■□□□ 1.74
RAP1B-227ENST00000542018 PRELPP51888 382 aa25.88■■□□□ 1.73
RAP1B-227ENST00000542018 USPL1Q5W0Q7 1092 aa25.88■■□□□ 1.73
RAP1B-227ENST00000542018 C16orf71Q8IYS4 520 aaPredicted RBP25.88■■□□□ 1.73
RAP1B-227ENST00000542018 VIRMAQ69YN4 1812 aaKnown RBP25.88■■□□□ 1.73
RAP1B-227ENST00000542018 SOS1Q07889 1333 aaPredicted RBP25.88■■□□□ 1.73
RAP1B-227ENST00000542018 KDM2BQ8NHM5 1336 aa25.88■■□□□ 1.73
RAP1B-227ENST00000542018 DLEC1Q9Y238 1755 aa25.87■■□□□ 1.73
RAP1B-227ENST00000542018 RASSF7Q02833 373 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms