RNA–Protein interactions for RNA: ENST00000541674.5

NPIPB4-214, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-214ENST00000541674 TIMMDC1Q9NPL8 285 aa11.48□□□□□ -0.57
NPIPB4-214ENST00000541674 DYRK1BQ9Y463 629 aa11.48□□□□□ -0.57
NPIPB4-214ENST00000541674 PCDHGA11Q9Y5H2 935 aa11.48□□□□□ -0.57
NPIPB4-214ENST00000541674 TMEM214Q6NUQ4 689 aaKnown RBP11.47□□□□□ -0.57
NPIPB4-214ENST00000541674 ZNF837Q96EG3 531 aaPredicted RBP11.46□□□□□ -0.57
NPIPB4-214ENST00000541674 SERTAD1Q9UHV2 236 aa11.46□□□□□ -0.57
NPIPB4-214ENST00000541674 NOD1Q9Y239 953 aa11.46□□□□□ -0.57
NPIPB4-214ENST00000541674 A6NJR5 290 aa11.45□□□□□ -0.58
NPIPB4-214ENST00000541674 TMEM229AB2RXF0 380 aa11.45□□□□□ -0.58
NPIPB4-214ENST00000541674 GTF2IP78347 998 aa11.45□□□□□ -0.58
NPIPB4-214ENST00000541674 DBN1Q16643 649 aa11.45□□□□□ -0.58
NPIPB4-214ENST00000541674 C4orf17Q53FE4 359 aa11.45□□□□□ -0.58
NPIPB4-214ENST00000541674 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
NPIPB4-214ENST00000541674 GNASQ5JWF2 1037 aa11.45□□□□□ -0.58
NPIPB4-214ENST00000541674 STK17AQ9UEE5 414 aa11.45□□□□□ -0.58
NPIPB4-214ENST00000541674 USP17L3A6NCW0 530 aa11.44□□□□□ -0.58
NPIPB4-214ENST00000541674 USP17L4A6NCW7 530 aa11.44□□□□□ -0.58
NPIPB4-214ENST00000541674 USP17L2Q6R6M4 530 aa11.44□□□□□ -0.58
NPIPB4-214ENST00000541674 USP17L1Q7RTZ2 530 aa11.44□□□□□ -0.58
NPIPB4-214ENST00000541674 TRIM22Q8IYM9 498 aa11.44□□□□□ -0.58
NPIPB4-214ENST00000541674 GPAMQ9HCL2 828 aa11.44□□□□□ -0.58
NPIPB4-214ENST00000541674 GTF2E1P29083 439 aaPredicted RBP11.43□□□□□ -0.58
NPIPB4-214ENST00000541674 PSME1Q06323 249 aa11.43□□□□□ -0.58
NPIPB4-214ENST00000541674 GPR25O00155 361 aa11.42□□□□□ -0.58
NPIPB4-214ENST00000541674 ATP9BO43861 1147 aa11.42□□□□□ -0.58
NPIPB4-214ENST00000541674 LZTS3O60299 673 aaPredicted RBP11.42□□□□□ -0.58
NPIPB4-214ENST00000541674 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
NPIPB4-214ENST00000541674 RHBDD1Q8TEB9 315 aa11.42□□□□□ -0.58
NPIPB4-214ENST00000541674 F11P03951 625 aa11.41□□□□□ -0.58
NPIPB4-214ENST00000541674 SMTNP53814 917 aa11.41□□□□□ -0.58
NPIPB4-214ENST00000541674 USP3Q9Y6I4 520 aa11.41□□□□□ -0.58
NPIPB4-214ENST00000541674 GAS6Q14393 721 aa11.4□□□□□ -0.58
NPIPB4-214ENST00000541674 PLEKHM2Q8IWE5 1019 aa11.4□□□□□ -0.58
NPIPB4-214ENST00000541674 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
NPIPB4-214ENST00000541674 GTPBP3Q969Y2 492 aaKnown RBP11.4□□□□□ -0.58
NPIPB4-214ENST00000541674 KIAA1024Q9UPX6 916 aa11.4□□□□□ -0.58
NPIPB4-214ENST00000541674 A0A1B0GTH6 734 aa11.39□□□□□ -0.59
NPIPB4-214ENST00000541674 THBS1P07996 1170 aa11.39□□□□□ -0.59
NPIPB4-214ENST00000541674 PLA2G4AP47712 749 aa11.39□□□□□ -0.59
NPIPB4-214ENST00000541674 H7C1W4 665 aa11.38□□□□□ -0.59
NPIPB4-214ENST00000541674 CLDN10P78369 228 aa11.38□□□□□ -0.59
NPIPB4-214ENST00000541674 CALR3Q96L12 384 aaKnown RBP11.38□□□□□ -0.59
NPIPB4-214ENST00000541674 SLC4A9Q96Q91 983 aa11.38□□□□□ -0.59
NPIPB4-214ENST00000541674 ZNF358Q9NW07 568 aa11.38□□□□□ -0.59
NPIPB4-214ENST00000541674 TFIP11Q9UBB9 837 aaKnown RBP11.38□□□□□ -0.59
NPIPB4-214ENST00000541674 GMCL1Q96IK5 515 aa11.37□□□□□ -0.59
NPIPB4-214ENST00000541674 NUCKS1Q9H1E3 243 aaKnown RBP11.37□□□□□ -0.59
NPIPB4-214ENST00000541674 RUBCNLQ9H714 662 aa11.37□□□□□ -0.59
NPIPB4-214ENST00000541674 A6NJY4 79 aa11.36□□□□□ -0.59
NPIPB4-214ENST00000541674 MSX1P28360 303 aa11.36□□□□□ -0.59
NPIPB4-214ENST00000541674 TRIM50Q86XT4 487 aa11.36□□□□□ -0.59
NPIPB4-214ENST00000541674 TPCN2Q8NHX9 752 aa11.36□□□□□ -0.59
NPIPB4-214ENST00000541674 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
NPIPB4-214ENST00000541674 IQSEC3Q9UPP2 1182 aaPredicted RBP11.36□□□□□ -0.59
NPIPB4-214ENST00000541674 MTFR1Q15390 333 aa11.35□□□□□ -0.59
NPIPB4-214ENST00000541674 ZNF295-AS1Q8N0V1 137 aa11.35□□□□□ -0.59
NPIPB4-214ENST00000541674 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
NPIPB4-214ENST00000541674 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
NPIPB4-214ENST00000541674 ZBTB7BO15156 539 aaPredicted RBP11.34□□□□□ -0.59
NPIPB4-214ENST00000541674 OGFOD1Q8N543 542 aa11.34□□□□□ -0.59
NPIPB4-214ENST00000541674 NIFKQ9BYG3 293 aaKnown RBP11.34□□□□□ -0.59
NPIPB4-214ENST00000541674 ZNF777Q9ULD5 760 aaPredicted RBP11.34□□□□□ -0.59
NPIPB4-214ENST00000541674 CDK2AP1O14519 115 aa11.33□□□□□ -0.6
NPIPB4-214ENST00000541674 FOXR1Q6PIV2 292 aa11.33□□□□□ -0.6
NPIPB4-214ENST00000541674 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
NPIPB4-214ENST00000541674 ZNF594Q96JF6 807 aaPredicted RBP11.33□□□□□ -0.6
NPIPB4-214ENST00000541674 DNAAF2Q9NVR5 837 aaKnown RBP11.33□□□□□ -0.6
NPIPB4-214ENST00000541674 FAM181BA6NEQ2 426 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 BACH1O14867 736 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 ADAMTS2O95450 1211 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 SLURP2P0DP57 97 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 ATP1A2P50993 1020 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 TNS4Q8IZW8 715 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 AIDAQ96BJ3 306 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 PARP3Q9Y6F1 533 aa11.32□□□□□ -0.6
NPIPB4-214ENST00000541674 CSB-PGBD3P0DP91 1061 aa11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 ATP4AP20648 1035 aa11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 EPHA4P54764 986 aa11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 TBCELQ5QJ74 424 aa11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 ZNF385CQ66K41 422 aaPredicted RBP11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 PGBD3Q8N328 593 aa11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 TRERF1Q96PN7 1200 aa11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 CABP1Q9NZU7 370 aa11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 SCHIP1Q9P0W5 487 aaPredicted RBP11.31□□□□□ -0.6
NPIPB4-214ENST00000541674 UBAP2LQ14157 1087 aaKnown RBP11.3□□□□□ -0.6
NPIPB4-214ENST00000541674 FOXK2Q01167 660 aa11.29□□□□□ -0.6
NPIPB4-214ENST00000541674 SRSF11Q05519 484 aaKnown RBP11.29□□□□□ -0.6
NPIPB4-214ENST00000541674 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
NPIPB4-214ENST00000541674 RASA1P20936 1047 aa11.28□□□□□ -0.6
NPIPB4-214ENST00000541674 SLC9A9Q8IVB4 645 aa11.28□□□□□ -0.6
NPIPB4-214ENST00000541674 LARGE2Q8N3Y3 721 aa11.28□□□□□ -0.6
NPIPB4-214ENST00000541674 SVOPQ8N4V2 548 aa11.28□□□□□ -0.6
NPIPB4-214ENST00000541674 ZDHHC1Q8WTX9 485 aa11.28□□□□□ -0.6
NPIPB4-214ENST00000541674 SFI1A8K8P3 1242 aa11.27□□□□□ -0.61
NPIPB4-214ENST00000541674 DKK1O94907 266 aa11.27□□□□□ -0.61
NPIPB4-214ENST00000541674 SIX5Q8N196 739 aa11.27□□□□□ -0.61
NPIPB4-214ENST00000541674 CRISPLD1Q9H336 500 aa11.27□□□□□ -0.61
NPIPB4-214ENST00000541674 IGF1RP08069 1367 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms