RNA–Protein interactions for RNA: ENST00000541674.5

NPIPB4-214, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-214ENST00000541674 AEBP2Q6ZN18 517 aaPredicted RBP33.41■■■□□ 2.94
NPIPB4-214ENST00000541674 CHIC1Q5VXU3 224 aa32.22■■■□□ 2.75
NPIPB4-214ENST00000541674 PHF23Q9BUL5 403 aaPredicted RBP28.36■■■□□ 2.13
NPIPB4-214ENST00000541674 SENP3Q9H4L4 574 aaPredicted RBP28.32■■■□□ 2.12
NPIPB4-214ENST00000541674 FOXD1Q16676 465 aa26.39■■□□□ 1.82
NPIPB4-214ENST00000541674 PLPPR3Q6T4P5 718 aa25.98■■□□□ 1.75
NPIPB4-214ENST00000541674 PPP6R1Q9UPN7 881 aa25.15■■□□□ 1.62
NPIPB4-214ENST00000541674 ADRA2BP18089 450 aa25.1■■□□□ 1.61
NPIPB4-214ENST00000541674 PIAS4Q8N2W9 510 aaPredicted RBP24.8■■□□□ 1.56
NPIPB4-214ENST00000541674 MSH5O43196 834 aa24.39■■□□□ 1.49
NPIPB4-214ENST00000541674 MAPK8IP2Q13387 824 aaPredicted RBP22.89■■□□□ 1.25
NPIPB4-214ENST00000541674 PPP4R3CPQ6ZMV5 832 aa22.89■■□□□ 1.25
NPIPB4-214ENST00000541674 POTEDQ86YR6 584 aa22.89■■□□□ 1.25
NPIPB4-214ENST00000541674 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
NPIPB4-214ENST00000541674 DMRT2Q9Y5R5 561 aa22.57■■□□□ 1.2
NPIPB4-214ENST00000541674 CNKSR2Q8WXI2 1034 aa22.29■■□□□ 1.16
NPIPB4-214ENST00000541674 NCBP3Q53F19 620 aaKnown RBP22.12■■□□□ 1.13
NPIPB4-214ENST00000541674 KCNA4P22459 653 aa22.02■■□□□ 1.12
NPIPB4-214ENST00000541674 HOXD11P31277 338 aaPredicted RBP21.94■■□□□ 1.1
NPIPB4-214ENST00000541674 RNF216Q9NWF9 866 aaPredicted RBP21.93■■□□□ 1.1
NPIPB4-214ENST00000541674 NPM3O75607 178 aaKnown RBP21.89■■□□□ 1.09
NPIPB4-214ENST00000541674 DCAF8L1A6NGE4 600 aa21.66■■□□□ 1.06
NPIPB4-214ENST00000541674 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
NPIPB4-214ENST00000541674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
NPIPB4-214ENST00000541674 RNF39Q9H2S5 420 aa20.91■□□□□ 0.94
NPIPB4-214ENST00000541674 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
NPIPB4-214ENST00000541674 SLC4A2P04920 1241 aa20.76■□□□□ 0.91
NPIPB4-214ENST00000541674 CACNB1Q02641 598 aaPredicted RBP20.62■□□□□ 0.89
NPIPB4-214ENST00000541674 C1QBPQ07021 282 aaKnown RBP20.59■□□□□ 0.89
NPIPB4-214ENST00000541674 U3KPZ7 1027 aaPredicted RBP20.59■□□□□ 0.89
NPIPB4-214ENST00000541674 FOXD4L1Q9NU39 408 aa20.3■□□□□ 0.84
NPIPB4-214ENST00000541674 ZBTB22O15209 634 aa20.29■□□□□ 0.84
NPIPB4-214ENST00000541674 MYCNP04198 464 aaPredicted RBP20.19■□□□□ 0.82
NPIPB4-214ENST00000541674 SPINK5Q9NQ38 1064 aaPredicted RBP20.15■□□□□ 0.82
NPIPB4-214ENST00000541674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.1■□□□□ 0.81
NPIPB4-214ENST00000541674 HNRNPUL2Q1KMD3 747 aaKnown RBP20.1■□□□□ 0.81
NPIPB4-214ENST00000541674 CAPN15O75808 1086 aa20.05■□□□□ 0.8
NPIPB4-214ENST00000541674 SAMD1Q6SPF0 538 aaPredicted RBP20.05■□□□□ 0.8
NPIPB4-214ENST00000541674 APLP2Q06481 763 aa19.95■□□□□ 0.78
NPIPB4-214ENST00000541674 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
NPIPB4-214ENST00000541674 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
NPIPB4-214ENST00000541674 CSRNP3Q8WYN3 585 aa19.83■□□□□ 0.77
NPIPB4-214ENST00000541674 DSG3P32926 999 aa19.79■□□□□ 0.76
NPIPB4-214ENST00000541674 ZNF219Q9P2Y4 722 aaPredicted RBP19.79■□□□□ 0.76
NPIPB4-214ENST00000541674 ATF5Q9Y2D1 282 aaPredicted RBP19.77■□□□□ 0.76
NPIPB4-214ENST00000541674 ABCB7O75027 752 aa19.69■□□□□ 0.74
NPIPB4-214ENST00000541674 ATXN8OSP0DMR3 200 aa19.57■□□□□ 0.72
NPIPB4-214ENST00000541674 POLA2Q14181 598 aa19.48■□□□□ 0.71
NPIPB4-214ENST00000541674 ZBTB12Q9Y330 459 aaPredicted RBP19.04■□□□□ 0.64
NPIPB4-214ENST00000541674 MKRN4PQ13434 485 aaPredicted RBP18.87■□□□□ 0.61
NPIPB4-214ENST00000541674 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
NPIPB4-214ENST00000541674 FBLN2P98095 1184 aa18.85■□□□□ 0.61
NPIPB4-214ENST00000541674 RBM42Q9BTD8 480 aaKnown RBP18.79■□□□□ 0.6
NPIPB4-214ENST00000541674 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
NPIPB4-214ENST00000541674 SPDYE6P0CI01 402 aa18.52■□□□□ 0.56
NPIPB4-214ENST00000541674 SPDYE2Q495Y8 402 aa18.52■□□□□ 0.56
NPIPB4-214ENST00000541674 AKT1S1Q96B36 256 aa18.51■□□□□ 0.55
NPIPB4-214ENST00000541674 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
NPIPB4-214ENST00000541674 REM2Q8IYK8 340 aaPredicted RBP18.38■□□□□ 0.53
NPIPB4-214ENST00000541674 SSUH2Q9Y2M2 353 aa18.37■□□□□ 0.53
NPIPB4-214ENST00000541674 SPDYE4A6NLX3 237 aa18.24■□□□□ 0.51
NPIPB4-214ENST00000541674 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
NPIPB4-214ENST00000541674 PITPNM1O00562 1244 aa18.2■□□□□ 0.5
NPIPB4-214ENST00000541674 PABPN1Q86U42 306 aaKnown RBP eCLIP18.2■□□□□ 0.5
NPIPB4-214ENST00000541674 SPDYE1Q8NFV5 336 aaPredicted RBP18.07■□□□□ 0.48
NPIPB4-214ENST00000541674 CLEC11AQ9Y240 323 aa18.06■□□□□ 0.48
NPIPB4-214ENST00000541674 POTEHQ6S545 545 aa18.04■□□□□ 0.48
NPIPB4-214ENST00000541674 FKBP8Q14318 412 aa17.95■□□□□ 0.46
NPIPB4-214ENST00000541674 PIP4P2Q8N4L2 257 aa17.93■□□□□ 0.46
NPIPB4-214ENST00000541674 FXR2P51116 673 aaKnown RBP eCLIP17.88■□□□□ 0.45
NPIPB4-214ENST00000541674 PROM2Q8N271 834 aa17.87■□□□□ 0.45
NPIPB4-214ENST00000541674 PRR29P0C7W0 189 aa17.81■□□□□ 0.44
NPIPB4-214ENST00000541674 PRKAR2AP13861 404 aaKnown RBP17.73■□□□□ 0.43
NPIPB4-214ENST00000541674 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
NPIPB4-214ENST00000541674 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
NPIPB4-214ENST00000541674 CREBZFQ9NS37 354 aa17.53■□□□□ 0.4
NPIPB4-214ENST00000541674 HAX1O00165 279 aa17.43■□□□□ 0.38
NPIPB4-214ENST00000541674 FARP1Q9Y4F1 1045 aaPredicted RBP17.43■□□□□ 0.38
NPIPB4-214ENST00000541674 MIER1Q8N108 512 aa17.33■□□□□ 0.36
NPIPB4-214ENST00000541674 EVX2Q03828 476 aa17.32■□□□□ 0.36
NPIPB4-214ENST00000541674 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
NPIPB4-214ENST00000541674 MNX1P50219 401 aaPredicted RBP17.31■□□□□ 0.36
NPIPB4-214ENST00000541674 C19orf67A6NJJ6 358 aa17.29■□□□□ 0.36
NPIPB4-214ENST00000541674 PLCD3Q8N3E9 789 aa17.26■□□□□ 0.35
NPIPB4-214ENST00000541674 PLEKHG5O94827 1062 aa17.2■□□□□ 0.34
NPIPB4-214ENST00000541674 CD44P16070 742 aaKnown RBP17.19■□□□□ 0.34
NPIPB4-214ENST00000541674 SP7Q8TDD2 431 aaPredicted RBP17.18■□□□□ 0.34
NPIPB4-214ENST00000541674 VASPP50552 380 aaPredicted RBP17.17■□□□□ 0.34
NPIPB4-214ENST00000541674 NPM1P06748 294 aaKnown RBP eCLIP17.16■□□□□ 0.34
NPIPB4-214ENST00000541674 ZRANB1Q9UGI0 708 aa17.04■□□□□ 0.32
NPIPB4-214ENST00000541674 ZBTB47Q9UFB7 747 aaPredicted RBP17.02■□□□□ 0.32
NPIPB4-214ENST00000541674 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
NPIPB4-214ENST00000541674 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
NPIPB4-214ENST00000541674 TSPYL2Q9H2G4 693 aaPredicted RBP16.96■□□□□ 0.31
NPIPB4-214ENST00000541674 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
NPIPB4-214ENST00000541674 NUBP1P53384 320 aa16.93■□□□□ 0.3
NPIPB4-214ENST00000541674 IFNLR1Q8IU57 520 aaPredicted RBP16.93■□□□□ 0.3
NPIPB4-214ENST00000541674 ZNF579Q8NAF0 562 aaKnown RBP16.93■□□□□ 0.3
NPIPB4-214ENST00000541674 GABBR2O75899 941 aa16.9■□□□□ 0.3
NPIPB4-214ENST00000541674 PHF12Q96QT6 1004 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms