RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
THBS3-210ENST00000541576 VIRMAQ69YN4 1812 aaKnown RBP11.1□□□□□ -0.63
THBS3-210ENST00000541576 CYP27B1O15528 508 aa11.1□□□□□ -0.63
THBS3-210ENST00000541576 EIF5BO60841 1220 aaKnown RBP11.1□□□□□ -0.63
THBS3-210ENST00000541576 ZCRB1Q8TBF4 217 aaKnown RBP11.1□□□□□ -0.63
THBS3-210ENST00000541576 NOB1Q9ULX3 412 aaKnown RBP11.1□□□□□ -0.63
THBS3-210ENST00000541576 COG6Q9Y2V7 657 aa11.1□□□□□ -0.63
THBS3-210ENST00000541576 NOP58Q9Y2X3 529 aaKnown RBP11.1□□□□□ -0.63
THBS3-210ENST00000541576 IPO8O15397 1037 aaKnown RBP11.09□□□□□ -0.63
THBS3-210ENST00000541576 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
THBS3-210ENST00000541576 HSP90AB1P08238 724 aaKnown RBP11.09□□□□□ -0.63
THBS3-210ENST00000541576 MS4A1P11836 297 aa11.09□□□□□ -0.63
THBS3-210ENST00000541576 MRPL50Q8N5N7 158 aaKnown RBP11.09□□□□□ -0.63
THBS3-210ENST00000541576 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
THBS3-210ENST00000541576 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
THBS3-210ENST00000541576 ADAMTS7Q9UKP4 1686 aa11.09□□□□□ -0.63
THBS3-210ENST00000541576 PLCH1Q4KWH8 1693 aa11.09□□□□□ -0.63
THBS3-210ENST00000541576 ATF7IPQ6VMQ6 1270 aa11.09□□□□□ -0.63
THBS3-210ENST00000541576 KDM6AO15550 1401 aaPredicted RBP11.08□□□□□ -0.64
THBS3-210ENST00000541576 TRIM27P14373 513 aa11.08□□□□□ -0.64
THBS3-210ENST00000541576 FTSJ3Q8IY81 847 aaKnown RBP11.08□□□□□ -0.64
THBS3-210ENST00000541576 DCAF5Q96JK2 942 aa11.08□□□□□ -0.64
THBS3-210ENST00000541576 DZIP1LQ8IYY4 767 aaKnown RBP11.08□□□□□ -0.64
THBS3-210ENST00000541576 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
THBS3-210ENST00000541576 SOS1Q07889 1333 aaPredicted RBP11.07□□□□□ -0.64
THBS3-210ENST00000541576 KDM3BQ7LBC6 1761 aa11.07□□□□□ -0.64
THBS3-210ENST00000541576 SLC52A2Q9HAB3 445 aa11.07□□□□□ -0.64
THBS3-210ENST00000541576 EIF4A1P60842 406 aaKnown RBP11.06□□□□□ -0.64
THBS3-210ENST00000541576 ARHGAP45Q92619 1136 aa11.06□□□□□ -0.64
THBS3-210ENST00000541576 SIPA1L3O60292 1781 aaPredicted RBP11.06□□□□□ -0.64
THBS3-210ENST00000541576 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
THBS3-210ENST00000541576 SPATA31A6Q5VVP1 1343 aa11.06□□□□□ -0.64
THBS3-210ENST00000541576 KCNQ3O43525 872 aa11.05□□□□□ -0.64
THBS3-210ENST00000541576 DDX54Q8TDD1 881 aaKnown RBP11.05□□□□□ -0.64
THBS3-210ENST00000541576 SLIT2O94813 1529 aa11.05□□□□□ -0.64
THBS3-210ENST00000541576 HSPA1LP34931 641 aa11.05□□□□□ -0.64
THBS3-210ENST00000541576 NFATC2IPQ8NCF5 419 aa11.05□□□□□ -0.64
THBS3-210ENST00000541576 NWD2Q9ULI1 1742 aa11.05□□□□□ -0.64
THBS3-210ENST00000541576 DISP2A7MBM2 1401 aa11.05□□□□□ -0.64
THBS3-210ENST00000541576 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
THBS3-210ENST00000541576 CCDC30Q5VVM6 783 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 C8orf37Q96NL8 207 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 STK31Q9BXU1 1019 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 MRC1P22897 1456 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 SPATA31A1Q5TZJ5 1347 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 SLC4A2P04920 1241 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 HOXB7P09629 217 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 CABP4P57796 275 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
THBS3-210ENST00000541576 SHANK3Q9BYB0 1731 aa11.04□□□□□ -0.64
THBS3-210ENST00000541576 TMEM57Q8N5G2 664 aa11.03□□□□□ -0.64
THBS3-210ENST00000541576 NGLY1Q96IV0 654 aa11.03□□□□□ -0.64
THBS3-210ENST00000541576 API5Q9BZZ5 524 aaKnown RBP11.03□□□□□ -0.64
THBS3-210ENST00000541576 THRAP3Q9Y2W1 955 aaKnown RBP11.03□□□□□ -0.64
THBS3-210ENST00000541576 CHMP4AQ9BY43 222 aa11.03□□□□□ -0.64
THBS3-210ENST00000541576 AAMPQ13685 434 aa11.03□□□□□ -0.64
THBS3-210ENST00000541576 HDGFL1Q5TGJ6 251 aa11.03□□□□□ -0.64
THBS3-210ENST00000541576 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
THBS3-210ENST00000541576 UNC5CLQ8IV45 518 aa11.03□□□□□ -0.64
THBS3-210ENST00000541576 ITPRIPQ8IWB1 547 aa11.03□□□□□ -0.64
THBS3-210ENST00000541576 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
THBS3-210ENST00000541576 CCDC9Q9Y3X0 531 aaKnown RBP11.03□□□□□ -0.64
THBS3-210ENST00000541576 SPATA31A5Q5VU36 1347 aa11.02□□□□□ -0.64
THBS3-210ENST00000541576 SPATA31A7Q8IWB4 1347 aa11.02□□□□□ -0.64
THBS3-210ENST00000541576 ERVV-2B6SEH9 535 aa11.02□□□□□ -0.64
THBS3-210ENST00000541576 NECTIN2Q92692 538 aa11.02□□□□□ -0.64
THBS3-210ENST00000541576 DDX19BQ9UMR2 479 aa11.02□□□□□ -0.64
THBS3-210ENST00000541576 EXOC5O00471 708 aa11.02□□□□□ -0.65
THBS3-210ENST00000541576 SLC39A6Q13433 755 aa11.02□□□□□ -0.65
THBS3-210ENST00000541576 PTPRCP08575 1304 aa11.02□□□□□ -0.65
THBS3-210ENST00000541576 LRP6O75581 1613 aa11.02□□□□□ -0.65
THBS3-210ENST00000541576 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
THBS3-210ENST00000541576 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
THBS3-210ENST00000541576 ZBTB47Q9UFB7 747 aaPredicted RBP11.01□□□□□ -0.65
THBS3-210ENST00000541576 HEG1Q9ULI3 1381 aa11.01□□□□□ -0.65
THBS3-210ENST00000541576 WNK3Q9BYP7 1800 aa11.01□□□□□ -0.65
THBS3-210ENST00000541576 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
THBS3-210ENST00000541576 PCDHB15Q9Y5E8 787 aa11.01□□□□□ -0.65
THBS3-210ENST00000541576 CACNA1FO60840 1977 aa11.01□□□□□ -0.65
THBS3-210ENST00000541576 ABCC4O15439 1325 aa11.01□□□□□ -0.65
THBS3-210ENST00000541576 GIGYF1O75420 1035 aaPredicted RBP11.01□□□□□ -0.65
THBS3-210ENST00000541576 G2E3Q7L622 706 aa11.01□□□□□ -0.65
THBS3-210ENST00000541576 KDM2BQ8NHM5 1336 aa11.01□□□□□ -0.65
THBS3-210ENST00000541576 FNBP4Q8N3X1 1017 aaPredicted RBP11□□□□□ -0.65
THBS3-210ENST00000541576 BCL9LQ86UU0 1499 aa11□□□□□ -0.65
THBS3-210ENST00000541576 IGHDP01880 384 aa11□□□□□ -0.65
THBS3-210ENST00000541576 TNS2Q63HR2 1409 aa11□□□□□ -0.65
THBS3-210ENST00000541576 MEX3CQ5U5Q3 659 aaKnown RBP10.99□□□□□ -0.65
THBS3-210ENST00000541576 FLIIQ13045 1269 aa10.99□□□□□ -0.65
THBS3-210ENST00000541576 VPS72Q15906 364 aa10.99□□□□□ -0.65
THBS3-210ENST00000541576 DDB1Q16531 1140 aa10.99□□□□□ -0.65
THBS3-210ENST00000541576 BARGINQ6ZT62 677 aa10.99□□□□□ -0.65
THBS3-210ENST00000541576 RGS12O14924 1447 aa10.99□□□□□ -0.65
THBS3-210ENST00000541576 ZNF496Q96IT1 587 aaPredicted RBP10.99□□□□□ -0.65
THBS3-210ENST00000541576 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
THBS3-210ENST00000541576 SKAP1Q86WV1 359 aa10.98□□□□□ -0.65
THBS3-210ENST00000541576 CHPF2Q9P2E5 772 aa10.98□□□□□ -0.65
THBS3-210ENST00000541576 USP21Q9UK80 565 aa10.98□□□□□ -0.65
THBS3-210ENST00000541576 PRAMEF22A3QJZ6 481 aa10.98□□□□□ -0.65
THBS3-210ENST00000541576 CHMP4BQ9H444 224 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms