RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 PLEKHG2Q9H7P9 1386 aa18.12■□□□□ 0.49
PRPF19-206ENST00000541371 GNPATO15228 680 aa18.11■□□□□ 0.49
PRPF19-206ENST00000541371 HSP90AB1P08238 724 aaKnown RBP18.11■□□□□ 0.49
PRPF19-206ENST00000541371 ITPK1Q13572 414 aa18.11■□□□□ 0.49
PRPF19-206ENST00000541371 ERVV-2B6SEH9 535 aa18.1■□□□□ 0.49
PRPF19-206ENST00000541371 AMOTQ4VCS5 1084 aa18.09■□□□□ 0.49
PRPF19-206ENST00000541371 DCAF5Q96JK2 942 aa18.09■□□□□ 0.49
PRPF19-206ENST00000541371 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
PRPF19-206ENST00000541371 GIGYF1O75420 1035 aaPredicted RBP18.08■□□□□ 0.48
PRPF19-206ENST00000541371 ZNF530Q6P9A1 599 aaPredicted RBP18.08■□□□□ 0.48
PRPF19-206ENST00000541371 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
PRPF19-206ENST00000541371 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
PRPF19-206ENST00000541371 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
PRPF19-206ENST00000541371 CABP4P57796 275 aa18.07■□□□□ 0.48
PRPF19-206ENST00000541371 C1orf141Q5JVX7 400 aa18.06■□□□□ 0.48
PRPF19-206ENST00000541371 TRAPPC3LQ5T215 181 aa18.06■□□□□ 0.48
PRPF19-206ENST00000541371 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
PRPF19-206ENST00000541371 MTHFSP49914 203 aa18.05■□□□□ 0.48
PRPF19-206ENST00000541371 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
PRPF19-206ENST00000541371 SULT6B1Q6IMI4 303 aa18.04■□□□□ 0.48
PRPF19-206ENST00000541371 WWC3Q9ULE0 1092 aa18.04■□□□□ 0.48
PRPF19-206ENST00000541371 KDRP35968 1356 aa18.04■□□□□ 0.48
PRPF19-206ENST00000541371 MMP10P09238 476 aa18.03■□□□□ 0.48
PRPF19-206ENST00000541371 SLC4A9Q96Q91 983 aa18.03■□□□□ 0.48
PRPF19-206ENST00000541371 KDM6AO15550 1401 aaPredicted RBP18.02■□□□□ 0.48
PRPF19-206ENST00000541371 RC3H1Q5TC82 1133 aaKnown RBP18.02■□□□□ 0.48
PRPF19-206ENST00000541371 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
PRPF19-206ENST00000541371 ADRA2BP18089 450 aa18.01■□□□□ 0.47
PRPF19-206ENST00000541371 CNTNAP4Q9C0A0 1308 aa18■□□□□ 0.47
PRPF19-206ENST00000541371 ATP10DQ9P241 1426 aa18■□□□□ 0.47
PRPF19-206ENST00000541371 PTCD1O75127 700 aaKnown RBP18■□□□□ 0.47
PRPF19-206ENST00000541371 IL13P35225 146 aa18■□□□□ 0.47
PRPF19-206ENST00000541371 RFC4P35249 363 aa18■□□□□ 0.47
PRPF19-206ENST00000541371 NFATC2IPQ8NCF5 419 aa18■□□□□ 0.47
PRPF19-206ENST00000541371 ARHGEF1Q92888 912 aaKnown RBP18■□□□□ 0.47
PRPF19-206ENST00000541371 RPS6KA4O75676 772 aa17.99■□□□□ 0.47
PRPF19-206ENST00000541371 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
PRPF19-206ENST00000541371 GPBP1L1Q9HC44 474 aaPredicted RBP17.98■□□□□ 0.47
PRPF19-206ENST00000541371 TGFB2P61812 414 aa17.97■□□□□ 0.47
PRPF19-206ENST00000541371 KIF7Q2M1P5 1343 aa17.97■□□□□ 0.47
PRPF19-206ENST00000541371 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
PRPF19-206ENST00000541371 GYS1P13807 737 aa17.96■□□□□ 0.47
PRPF19-206ENST00000541371 ZNF526Q8TF50 670 aaPredicted RBP17.96■□□□□ 0.47
PRPF19-206ENST00000541371 CCDC87Q9NVE4 849 aa17.96■□□□□ 0.47
PRPF19-206ENST00000541371 PARP3Q9Y6F1 533 aa17.96■□□□□ 0.47
PRPF19-206ENST00000541371 CRKLP46109 303 aaKnown RBP17.95■□□□□ 0.46
PRPF19-206ENST00000541371 AKAP4Q5JQC9 854 aa17.95■□□□□ 0.46
PRPF19-206ENST00000541371 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
PRPF19-206ENST00000541371 GOLGB1Q14789 3259 aaKnown RBP17.94■□□□□ 0.46
PRPF19-206ENST00000541371 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
PRPF19-206ENST00000541371 ADCY9O60503 1353 aa17.93■□□□□ 0.46
PRPF19-206ENST00000541371 HMOX1P09601 288 aa17.93■□□□□ 0.46
PRPF19-206ENST00000541371 BCS1LQ9Y276 419 aa17.93■□□□□ 0.46
PRPF19-206ENST00000541371 COL5A3P25940 1745 aaPredicted RBP17.92■□□□□ 0.46
PRPF19-206ENST00000541371 CC2D1BQ5T0F9 858 aaKnown RBP17.92■□□□□ 0.46
PRPF19-206ENST00000541371 SLC52A2Q9HAB3 445 aa17.92■□□□□ 0.46
PRPF19-206ENST00000541371 PXDNLA1KZ92 1463 aa17.92■□□□□ 0.46
PRPF19-206ENST00000541371 DPEP1P16444 411 aa17.91■□□□□ 0.46
PRPF19-206ENST00000541371 LGR6Q9HBX8 967 aa17.91■□□□□ 0.46
PRPF19-206ENST00000541371 SRP68Q9UHB9 627 aaKnown RBP17.91■□□□□ 0.46
PRPF19-206ENST00000541371 C10orf71Q711Q0 1435 aa17.9■□□□□ 0.46
PRPF19-206ENST00000541371 PER1O15534 1290 aaPredicted RBP17.9■□□□□ 0.46
PRPF19-206ENST00000541371 RNMTO43148 476 aaKnown RBP17.9■□□□□ 0.46
PRPF19-206ENST00000541371 DIAPH1O60610 1272 aaKnown RBP17.9■□□□□ 0.46
PRPF19-206ENST00000541371 MYH14Q7Z406 1995 aaKnown RBP17.9■□□□□ 0.46
PRPF19-206ENST00000541371 FCHSD2O94868 740 aa17.89■□□□□ 0.45
PRPF19-206ENST00000541371 FKBP8Q14318 412 aa17.89■□□□□ 0.45
PRPF19-206ENST00000541371 INTS5Q6P9B9 1019 aaKnown RBP17.89■□□□□ 0.45
PRPF19-206ENST00000541371 ARHGAP27Q6ZUM4 889 aa17.89■□□□□ 0.45
PRPF19-206ENST00000541371 DNAJC10Q8IXB1 793 aa17.89■□□□□ 0.45
PRPF19-206ENST00000541371 USP42Q9H9J4 1324 aaKnown RBP17.89■□□□□ 0.45
PRPF19-206ENST00000541371 MTHFSDQ2M296 383 aaKnown RBP17.88■□□□□ 0.45
PRPF19-206ENST00000541371 C4AP0C0L4 1744 aa17.88■□□□□ 0.45
PRPF19-206ENST00000541371 KIF13BQ9NQT8 1826 aa17.88■□□□□ 0.45
PRPF19-206ENST00000541371 SCN11AQ9UI33 1791 aa17.87■□□□□ 0.45
PRPF19-206ENST00000541371 ZPR1O75312 459 aa17.87■□□□□ 0.45
PRPF19-206ENST00000541371 SLC39A6Q13433 755 aa17.87■□□□□ 0.45
PRPF19-206ENST00000541371 CNGB1Q14028 1251 aaPredicted RBP17.87■□□□□ 0.45
PRPF19-206ENST00000541371 N4BP2Q86UW6 1770 aaPredicted RBP17.86■□□□□ 0.45
PRPF19-206ENST00000541371 PIM2Q9P1W9 311 aa17.86■□□□□ 0.45
PRPF19-206ENST00000541371 DDR1Q08345 913 aa17.85■□□□□ 0.45
PRPF19-206ENST00000541371 TJP1Q07157 1748 aa17.84■□□□□ 0.45
PRPF19-206ENST00000541371 KIAA1551Q9HCM1 1747 aa17.84■□□□□ 0.45
PRPF19-206ENST00000541371 SOS1Q07889 1333 aaPredicted RBP17.84■□□□□ 0.45
PRPF19-206ENST00000541371 CYP19A1P11511 503 aaPredicted RBP17.84■□□□□ 0.45
PRPF19-206ENST00000541371 USPL1Q5W0Q7 1092 aa17.84■□□□□ 0.45
PRPF19-206ENST00000541371 U2SURPO15042 1029 aaKnown RBP17.83■□□□□ 0.44
PRPF19-206ENST00000541371 HSPA6P17066 643 aa17.83■□□□□ 0.44
PRPF19-206ENST00000541371 KCNA3P22001 575 aa17.83■□□□□ 0.44
PRPF19-206ENST00000541371 TM4SF1P30408 202 aa17.83■□□□□ 0.44
PRPF19-206ENST00000541371 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.44
PRPF19-206ENST00000541371 MRC1P22897 1456 aa17.82■□□□□ 0.44
PRPF19-206ENST00000541371 POLRMTO00411 1230 aaKnown RBP17.82■□□□□ 0.44
PRPF19-206ENST00000541371 KIF3CO14782 793 aa17.82■□□□□ 0.44
PRPF19-206ENST00000541371 VSIG10Q8N0Z9 540 aa17.82■□□□□ 0.44
PRPF19-206ENST00000541371 NPC1L1Q9UHC9 1359 aa17.81■□□□□ 0.44
PRPF19-206ENST00000541371 TTC5Q8N0Z6 440 aa17.81■□□□□ 0.44
PRPF19-206ENST00000541371 NARFQ9UHQ1 456 aa17.81■□□□□ 0.44
PRPF19-206ENST00000541371 ZBTB1Q9Y2K1 713 aa17.81■□□□□ 0.44
PRPF19-206ENST00000541371 CHRNA5P30532 468 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms