RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 SEMA3FQ13275 785 aa9.94□□□□□ -0.82
SUDS3-202ENST00000541280 NBPF10Q6P3W6 841 aaKnown RBP9.94□□□□□ -0.82
SUDS3-202ENST00000541280 NBPF15Q8N660 670 aa9.94□□□□□ -0.82
SUDS3-202ENST00000541280 CNKSR1Q969H4 720 aa9.94□□□□□ -0.82
SUDS3-202ENST00000541280 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
SUDS3-202ENST00000541280 CUEDC1Q9NWM3 386 aaPredicted RBP9.94□□□□□ -0.82
SUDS3-202ENST00000541280 CDC14CA4D256 554 aa9.93□□□□□ -0.82
SUDS3-202ENST00000541280 POU4F2Q12837 409 aa9.93□□□□□ -0.82
SUDS3-202ENST00000541280 ESCO1Q5FWF5 840 aa9.93□□□□□ -0.82
SUDS3-202ENST00000541280 RNFT1Q5M7Z0 435 aa9.93□□□□□ -0.82
SUDS3-202ENST00000541280 TRIM22Q8IYM9 498 aa9.93□□□□□ -0.82
SUDS3-202ENST00000541280 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
SUDS3-202ENST00000541280 CNTNAP3Q9BZ76 1288 aa9.93□□□□□ -0.82
SUDS3-202ENST00000541280 FHDC1Q9C0D6 1143 aaPredicted RBP9.93□□□□□ -0.82
SUDS3-202ENST00000541280 RAB6BQ9NRW1 208 aa9.93□□□□□ -0.82
SUDS3-202ENST00000541280 WASLO00401 505 aaPredicted RBP9.92□□□□□ -0.82
SUDS3-202ENST00000541280 CENPCQ03188 943 aa9.92□□□□□ -0.82
SUDS3-202ENST00000541280 TMEM132AQ24JP5 1023 aa9.92□□□□□ -0.82
SUDS3-202ENST00000541280 PLPP7Q8NBV4 271 aa9.92□□□□□ -0.82
SUDS3-202ENST00000541280 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
SUDS3-202ENST00000541280 SLURP2P0DP57 97 aa9.91□□□□□ -0.82
SUDS3-202ENST00000541280 TAS1R3Q7RTX0 852 aa9.91□□□□□ -0.82
SUDS3-202ENST00000541280 ZNF837Q96EG3 531 aaPredicted RBP9.91□□□□□ -0.82
SUDS3-202ENST00000541280 ALG2Q9H553 416 aa9.91□□□□□ -0.82
SUDS3-202ENST00000541280 SOGA1O94964 1423 aa9.9□□□□□ -0.82
SUDS3-202ENST00000541280 OXLD1Q5BKU9 147 aa9.9□□□□□ -0.82
SUDS3-202ENST00000541280 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
SUDS3-202ENST00000541280 ETNK1Q9HBU6 452 aa9.9□□□□□ -0.82
SUDS3-202ENST00000541280 DNMBPQ6XZF7 1577 aa9.89□□□□□ -0.83
SUDS3-202ENST00000541280 H7C1W4 665 aa9.89□□□□□ -0.83
SUDS3-202ENST00000541280 NFATC2IPQ8NCF5 419 aa9.89□□□□□ -0.83
SUDS3-202ENST00000541280 SCNN1DP51172 638 aa9.88□□□□□ -0.83
SUDS3-202ENST00000541280 GAS6Q14393 721 aa9.88□□□□□ -0.83
SUDS3-202ENST00000541280 DBN1Q16643 649 aa9.88□□□□□ -0.83
SUDS3-202ENST00000541280 ZSCAN10Q96SZ4 725 aaPredicted RBP9.88□□□□□ -0.83
SUDS3-202ENST00000541280 TIMMDC1Q9NPL8 285 aa9.88□□□□□ -0.83
SUDS3-202ENST00000541280 RAD21O60216 631 aa9.87□□□□□ -0.83
SUDS3-202ENST00000541280 PIK3CDO00329 1044 aa9.86□□□□□ -0.83
SUDS3-202ENST00000541280 LZTS3O60299 673 aaPredicted RBP9.86□□□□□ -0.83
SUDS3-202ENST00000541280 F11P03951 625 aa9.86□□□□□ -0.83
SUDS3-202ENST00000541280 UBTFP17480 764 aaKnown RBP9.86□□□□□ -0.83
SUDS3-202ENST00000541280 POLA1P09884 1462 aaPredicted RBP9.85□□□□□ -0.83
SUDS3-202ENST00000541280 INHAP05111 366 aa9.85□□□□□ -0.83
SUDS3-202ENST00000541280 SRSF11Q05519 484 aaKnown RBP9.85□□□□□ -0.83
SUDS3-202ENST00000541280 ZNF385CQ66K41 422 aaPredicted RBP9.85□□□□□ -0.83
SUDS3-202ENST00000541280 PPARGC1BQ86YN6 1023 aaKnown RBP9.85□□□□□ -0.83
SUDS3-202ENST00000541280 ZNF608Q9ULD9 1512 aaPredicted RBP9.84□□□□□ -0.83
SUDS3-202ENST00000541280 A0A1B0GTH6 734 aa9.84□□□□□ -0.83
SUDS3-202ENST00000541280 STAU1O95793 577 aaKnown RBP9.84□□□□□ -0.83
SUDS3-202ENST00000541280 GNASQ5JWF2 1037 aa9.84□□□□□ -0.83
SUDS3-202ENST00000541280 RIPOR1Q6ZS17 1223 aa9.84□□□□□ -0.83
SUDS3-202ENST00000541280 GAS2L1Q99501 681 aaPredicted RBP9.84□□□□□ -0.83
SUDS3-202ENST00000541280 GDF10P55107 478 aa9.83□□□□□ -0.84
SUDS3-202ENST00000541280 LBRQ14739 615 aaKnown RBP9.83□□□□□ -0.84
SUDS3-202ENST00000541280 C4orf17Q53FE4 359 aa9.83□□□□□ -0.84
SUDS3-202ENST00000541280 FOXR1Q6PIV2 292 aa9.83□□□□□ -0.84
SUDS3-202ENST00000541280 RHBDD1Q8TEB9 315 aa9.83□□□□□ -0.84
SUDS3-202ENST00000541280 MBIPQ9NS73 344 aa9.83□□□□□ -0.84
SUDS3-202ENST00000541280 TDRD9Q8NDG6 1382 aaKnown RBP9.83□□□□□ -0.84
SUDS3-202ENST00000541280 AQRO60306 1485 aaKnown RBP eCLIP9.83□□□□□ -0.84
SUDS3-202ENST00000541280 THBS1P07996 1170 aa9.82□□□□□ -0.84
SUDS3-202ENST00000541280 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
SUDS3-202ENST00000541280 TLR1Q15399 786 aa9.82□□□□□ -0.84
SUDS3-202ENST00000541280 TMEM214Q6NUQ4 689 aaKnown RBP9.82□□□□□ -0.84
SUDS3-202ENST00000541280 ADAMTS19Q8TE59 1207 aa9.82□□□□□ -0.84
SUDS3-202ENST00000541280 SLC4A9Q96Q91 983 aa9.82□□□□□ -0.84
SUDS3-202ENST00000541280 NUCKS1Q9H1E3 243 aaKnown RBP9.82□□□□□ -0.84
SUDS3-202ENST00000541280 PCDHGA11Q9Y5H2 935 aa9.82□□□□□ -0.84
SUDS3-202ENST00000541280 PRDM2Q13029 1718 aa9.82□□□□□ -0.84
SUDS3-202ENST00000541280 WRNQ14191 1432 aaPredicted RBP eCLIP9.82□□□□□ -0.84
SUDS3-202ENST00000541280 ARHGEF15O94989 841 aa9.81□□□□□ -0.84
SUDS3-202ENST00000541280 ADAMTS2O95450 1211 aa9.81□□□□□ -0.84
SUDS3-202ENST00000541280 SKIP12755 728 aa9.81□□□□□ -0.84
SUDS3-202ENST00000541280 EML3Q32P44 896 aa9.81□□□□□ -0.84
SUDS3-202ENST00000541280 CHMP7Q8WUX9 453 aaPredicted RBP9.81□□□□□ -0.84
SUDS3-202ENST00000541280 GTPBP3Q969Y2 492 aaKnown RBP9.81□□□□□ -0.84
SUDS3-202ENST00000541280 FGD5Q6ZNL6 1462 aa9.8□□□□□ -0.84
SUDS3-202ENST00000541280 RAD54L2Q9Y4B4 1467 aa9.8□□□□□ -0.84
SUDS3-202ENST00000541280 POM121CA8CG34 1229 aa9.8□□□□□ -0.84
SUDS3-202ENST00000541280 TMEM229AB2RXF0 380 aa9.8□□□□□ -0.84
SUDS3-202ENST00000541280 MTFR1Q15390 333 aa9.8□□□□□ -0.84
SUDS3-202ENST00000541280 WHAMMQ8TF30 809 aa9.8□□□□□ -0.84
SUDS3-202ENST00000541280 CUX1P39880 1505 aa9.79□□□□□ -0.84
SUDS3-202ENST00000541280 SMTNP53814 917 aa9.79□□□□□ -0.84
SUDS3-202ENST00000541280 UBAP2LQ14157 1087 aaKnown RBP9.79□□□□□ -0.84
SUDS3-202ENST00000541280 ZNF295-AS1Q8N0V1 137 aa9.79□□□□□ -0.84
SUDS3-202ENST00000541280 SVOPQ8N4V2 548 aa9.79□□□□□ -0.84
SUDS3-202ENST00000541280 TRERF1Q96PN7 1200 aa9.79□□□□□ -0.84
SUDS3-202ENST00000541280 NOD1Q9Y239 953 aa9.79□□□□□ -0.84
SUDS3-202ENST00000541280 GPR25O00155 361 aa9.78□□□□□ -0.84
SUDS3-202ENST00000541280 PHKA2P46019 1235 aa9.78□□□□□ -0.84
SUDS3-202ENST00000541280 NCOA4Q13772 614 aa9.78□□□□□ -0.84
SUDS3-202ENST00000541280 PLEKHM2Q8IWE5 1019 aa9.78□□□□□ -0.84
SUDS3-202ENST00000541280 FNBP4Q8N3X1 1017 aaPredicted RBP9.78□□□□□ -0.84
SUDS3-202ENST00000541280 CFHR5Q9BXR6 569 aa9.78□□□□□ -0.84
SUDS3-202ENST00000541280 ADAMTS8Q9UP79 889 aa9.78□□□□□ -0.84
SUDS3-202ENST00000541280 USP17L5A8MUK1 530 aa9.77□□□□□ -0.85
SUDS3-202ENST00000541280 MSX1P28360 303 aa9.77□□□□□ -0.85
SUDS3-202ENST00000541280 KCNMA1Q12791 1236 aa9.77□□□□□ -0.85
SUDS3-202ENST00000541280 UCN2Q96RP3 112 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms