RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 ATG3Q9NT62 314 aa37.07■■■■□ 3.52
CHFR-218ENST00000540963 TIMELESSQ9UNS1 1208 aa37.07■■■■□ 3.52
CHFR-218ENST00000540963 HSPA6P17066 643 aa37.06■■■■□ 3.52
CHFR-218ENST00000540963 KDRP35968 1356 aa37.04■■■■□ 3.52
CHFR-218ENST00000540963 ERVV-2B6SEH9 535 aa37.02■■■■□ 3.52
CHFR-218ENST00000540963 MMP10P09238 476 aa37.02■■■■□ 3.52
CHFR-218ENST00000540963 ZNF526Q8TF50 670 aaPredicted RBP37.02■■■■□ 3.52
CHFR-218ENST00000540963 TRIM26Q12899 539 aaPredicted RBP37.01■■■■□ 3.52
CHFR-218ENST00000540963 EIF4A2Q14240 407 aaKnown RBP37.01■■■■□ 3.52
CHFR-218ENST00000540963 NLGN1Q8N2Q7 840 aa37.01■■■■□ 3.52
CHFR-218ENST00000540963 RTCBQ9Y3I0 505 aaKnown RBP37.01■■■■□ 3.52
CHFR-218ENST00000540963 TGFB2P61812 414 aa37■■■■□ 3.51
CHFR-218ENST00000540963 KIAA1551Q9HCM1 1747 aa36.99■■■■□ 3.51
CHFR-218ENST00000540963 HSP90AB1P08238 724 aaKnown RBP36.99■■■■□ 3.51
CHFR-218ENST00000540963 ADRA2BP18089 450 aa36.99■■■■□ 3.51
CHFR-218ENST00000540963 TRAPPC3LQ5T215 181 aa36.99■■■■□ 3.51
CHFR-218ENST00000540963 RC3H1Q5TC82 1133 aaKnown RBP36.99■■■■□ 3.51
CHFR-218ENST00000540963 PXDNLA1KZ92 1463 aa36.99■■■■□ 3.51
CHFR-218ENST00000540963 WWC3Q9ULE0 1092 aa36.98■■■■□ 3.51
CHFR-218ENST00000540963 COL5A3P25940 1745 aaPredicted RBP36.97■■■■□ 3.51
CHFR-218ENST00000540963 DCAF5Q96JK2 942 aa36.97■■■■□ 3.51
CHFR-218ENST00000540963 CNTNAP4Q9C0A0 1308 aa36.94■■■■□ 3.5
CHFR-218ENST00000540963 KIF3CO14782 793 aa36.94■■■■□ 3.5
CHFR-218ENST00000540963 C10orf71Q711Q0 1435 aa36.93■■■■□ 3.5
CHFR-218ENST00000540963 N4BP2Q86UW6 1770 aaPredicted RBP36.93■■■■□ 3.5
CHFR-218ENST00000540963 SLC4A9Q96Q91 983 aa36.92■■■■□ 3.5
CHFR-218ENST00000540963 PLEKHO1Q53GL0 409 aaPredicted RBP36.91■■■■□ 3.5
CHFR-218ENST00000540963 C4AP0C0L4 1744 aa36.9■■■■□ 3.5
CHFR-218ENST00000540963 ARHGEF1Q92888 912 aaKnown RBP36.9■■■■□ 3.5
CHFR-218ENST00000540963 RPS6KA4O75676 772 aa36.89■■■■□ 3.5
CHFR-218ENST00000540963 AMOTQ4VCS5 1084 aa36.89■■■■□ 3.5
CHFR-218ENST00000540963 RBM42Q9BTD8 480 aaKnown RBP36.89■■■■□ 3.5
CHFR-218ENST00000540963 CCDC87Q9NVE4 849 aa36.89■■■■□ 3.5
CHFR-218ENST00000540963 BRCA1P38398 1863 aaKnown RBP36.88■■■■□ 3.49
CHFR-218ENST00000540963 TNNT2P45379 298 aaPredicted RBP36.87■■■■□ 3.49
CHFR-218ENST00000540963 MYH14Q7Z406 1995 aaKnown RBP36.86■■■■□ 3.49
CHFR-218ENST00000540963 GYS1P13807 737 aa36.86■■■■□ 3.49
CHFR-218ENST00000540963 RFC4P35249 363 aa36.86■■■■□ 3.49
CHFR-218ENST00000540963 BCS1LQ9Y276 419 aa36.86■■■■□ 3.49
CHFR-218ENST00000540963 KDM6AO15550 1401 aaPredicted RBP36.85■■■■□ 3.49
CHFR-218ENST00000540963 A0A0G2JLW4 131 aa36.84■■■■□ 3.49
CHFR-218ENST00000540963 CLSPNQ9HAW4 1339 aa36.84■■■■□ 3.49
CHFR-218ENST00000540963 CABP4P57796 275 aa36.83■■■■□ 3.49
CHFR-218ENST00000540963 PARP3Q9Y6F1 533 aa36.83■■■■□ 3.49
CHFR-218ENST00000540963 ZNF530Q6P9A1 599 aaPredicted RBP36.82■■■■□ 3.48
CHFR-218ENST00000540963 ARFGEF1Q9Y6D6 1849 aa36.82■■■■□ 3.48
CHFR-218ENST00000540963 TOMM70O94826 608 aa36.8■■■■□ 3.48
CHFR-218ENST00000540963 POLR3GLQ9BT43 218 aa36.8■■■■□ 3.48
CHFR-218ENST00000540963 DPEP1P16444 411 aa36.79■■■■□ 3.48
CHFR-218ENST00000540963 APLP1P51693 650 aa36.79■■■■□ 3.48
CHFR-218ENST00000540963 MTHFSP49914 203 aa36.78■■■■□ 3.48
CHFR-218ENST00000540963 ARHGAP27Q6ZUM4 889 aa36.78■■■■□ 3.48
CHFR-218ENST00000540963 C1orf141Q5JVX7 400 aa36.77■■■■□ 3.48
CHFR-218ENST00000540963 FCHSD2O94868 740 aa36.76■■■■□ 3.48
CHFR-218ENST00000540963 PANK3Q9H999 370 aa36.75■■■■□ 3.47
CHFR-218ENST00000540963 KCNA3P22001 575 aa36.73■■■■□ 3.47
CHFR-218ENST00000540963 CRKLP46109 303 aaKnown RBP36.72■■■■□ 3.47
CHFR-218ENST00000540963 PTCD1O75127 700 aaKnown RBP36.71■■■■□ 3.47
CHFR-218ENST00000540963 PIM2Q9P1W9 311 aa36.71■■■■□ 3.47
CHFR-218ENST00000540963 SCN11AQ9UI33 1791 aa36.71■■■■□ 3.47
CHFR-218ENST00000540963 USP42Q9H9J4 1324 aaKnown RBP36.7■■■■□ 3.47
CHFR-218ENST00000540963 EIF4G2P78344 907 aaKnown RBP eCLIP36.7■■■■□ 3.47
CHFR-218ENST00000540963 NFATC2IPQ8NCF5 419 aa36.7■■■■□ 3.47
CHFR-218ENST00000540963 TJP1Q07157 1748 aa36.7■■■■□ 3.47
CHFR-218ENST00000540963 AEBP1Q8IUX7 1158 aa36.68■■■■□ 3.46
CHFR-218ENST00000540963 MORC1Q86VD1 984 aa36.67■■■■□ 3.46
CHFR-218ENST00000540963 NMRK2Q9NPI5 230 aa36.65■■■■□ 3.46
CHFR-218ENST00000540963 FKBP8Q14318 412 aa36.64■■■■□ 3.46
CHFR-218ENST00000540963 DALRD3Q5D0E6 543 aaKnown RBP36.64■■■■□ 3.46
CHFR-218ENST00000540963 C9orf131Q5VYM1 1079 aa36.64■■■■□ 3.46
CHFR-218ENST00000540963 SULT6B1Q6IMI4 303 aa36.64■■■■□ 3.46
CHFR-218ENST00000540963 RBM46Q8TBY0 533 aaKnown RBP36.64■■■■□ 3.46
CHFR-218ENST00000540963 ADAMTS7Q9UKP4 1686 aa36.64■■■■□ 3.46
CHFR-218ENST00000540963 DNAJC5GQ8N7S2 189 aa36.63■■■■□ 3.45
CHFR-218ENST00000540963 SRP68Q9UHB9 627 aaKnown RBP36.63■■■■□ 3.45
CHFR-218ENST00000540963 DDR1Q08345 913 aa36.62■■■■□ 3.45
CHFR-218ENST00000540963 HSPA5P11021 654 aaKnown RBP36.61■■■■□ 3.45
CHFR-218ENST00000540963 INTS5Q6P9B9 1019 aaKnown RBP36.61■■■■□ 3.45
CHFR-218ENST00000540963 IL13P35225 146 aa36.6■■■■□ 3.45
CHFR-218ENST00000540963 TM4SF1P30408 202 aa36.59■■■■□ 3.45
CHFR-218ENST00000540963 AKAP4Q5JQC9 854 aa36.59■■■■□ 3.45
CHFR-218ENST00000540963 KDM2BQ8NHM5 1336 aa36.59■■■■□ 3.45
CHFR-218ENST00000540963 SBF1O95248 1867 aa36.58■■■■□ 3.45
CHFR-218ENST00000540963 WDR90Q96KV7 1748 aa36.58■■■■□ 3.45
CHFR-218ENST00000540963 POLRMTO00411 1230 aaKnown RBP36.57■■■■□ 3.44
CHFR-218ENST00000540963 C16orf71Q8IYS4 520 aaPredicted RBP36.57■■■■□ 3.44
CHFR-218ENST00000540963 FSTL1Q12841 308 aa36.56■■■■□ 3.44
CHFR-218ENST00000540963 KNSTRNQ9Y448 316 aa36.56■■■■□ 3.44
CHFR-218ENST00000540963 ZPR1O75312 459 aa36.55■■■■□ 3.44
CHFR-218ENST00000540963 SLC52A2Q9HAB3 445 aa36.55■■■■□ 3.44
CHFR-218ENST00000540963 MRC1P22897 1456 aa36.55■■■■□ 3.44
CHFR-218ENST00000540963 VIRMAQ69YN4 1812 aaKnown RBP36.53■■■■□ 3.44
CHFR-218ENST00000540963 TNRC6CQ9HCJ0 1690 aaKnown RBP36.53■■■■□ 3.44
CHFR-218ENST00000540963 SOS1Q07889 1333 aaPredicted RBP36.53■■■■□ 3.44
CHFR-218ENST00000540963 RNF181Q9P0P0 153 aa36.52■■■■□ 3.44
CHFR-218ENST00000540963 DNAJC10Q8IXB1 793 aa36.51■■■■□ 3.44
CHFR-218ENST00000540963 ZC3H4Q9UPT8 1303 aaKnown RBP36.51■■■■□ 3.43
CHFR-218ENST00000540963 KCPQ6ZWJ8 1503 aa36.5■■■■□ 3.43
CHFR-218ENST00000540963 CHRNA5P30532 468 aa36.5■■■■□ 3.43
CHFR-218ENST00000540963 NRXN2Q9P2S2 1712 aa36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms