RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PDE3BQ13370 1112 aa6.93□□□□□ -1.3
SNHG1-214ENST00000540865 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
SNHG1-214ENST00000540865 GPRASP1Q5JY77 1395 aa6.93□□□□□ -1.3
SNHG1-214ENST00000540865 ANKARQ7Z5J8 1434 aa6.93□□□□□ -1.3
SNHG1-214ENST00000540865 YTHDC2Q9H6S0 1430 aaKnown RBP6.93□□□□□ -1.3
SNHG1-214ENST00000540865 ZMYND10O75800 440 aa6.92□□□□□ -1.3
SNHG1-214ENST00000540865 ITGBL1O95965 494 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-214ENST00000540865 BCAMP50895 628 aa6.92□□□□□ -1.3
SNHG1-214ENST00000540865 BARGINQ6ZT62 677 aa6.92□□□□□ -1.3
SNHG1-214ENST00000540865 PMFBP1Q8TBY8 1022 aa6.92□□□□□ -1.3
SNHG1-214ENST00000540865 THSD7AQ9UPZ6 1657 aa6.92□□□□□ -1.3
SNHG1-214ENST00000540865 TNS1Q9HBL0 1735 aaKnown RBP6.91□□□□□ -1.3
SNHG1-214ENST00000540865 FMN2Q9NZ56 1722 aa6.91□□□□□ -1.3
SNHG1-214ENST00000540865 ANKK1Q8NFD2 765 aa6.91□□□□□ -1.3
SNHG1-214ENST00000540865 ACIN1Q9UKV3 1341 aaKnown RBP6.91□□□□□ -1.3
SNHG1-214ENST00000540865 NRAPQ86VF7 1730 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 COL14A1Q05707 1796 aaKnown RBP6.9□□□□□ -1.3
SNHG1-214ENST00000540865 KIF1BO60333 1816 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 PPP1R3GB7ZBB8 358 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 PLSCR1O15162 318 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 GNPATO15228 680 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 FAM161AQ3B820 660 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 PROX2Q3B8N5 592 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 RGL3Q3MIN7 710 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 PADI6Q6TGC4 694 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 PRAM1Q96QH2 718 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 C14orf93Q9H972 538 aaKnown RBP6.9□□□□□ -1.3
SNHG1-214ENST00000540865 STRN4Q9NRL3 753 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 FAM198AQ9UFP1 575 aa6.9□□□□□ -1.3
SNHG1-214ENST00000540865 DHX57Q6P158 1386 aaKnown RBP6.9□□□□□ -1.31
SNHG1-214ENST00000540865 PIK3C2GO75747 1445 aa6.9□□□□□ -1.31
SNHG1-214ENST00000540865 EVA1CP58658 441 aa6.89□□□□□ -1.31
SNHG1-214ENST00000540865 SAFB2Q14151 953 aaKnown RBP eCLIP6.89□□□□□ -1.31
SNHG1-214ENST00000540865 HIC1Q14526 733 aa6.89□□□□□ -1.31
SNHG1-214ENST00000540865 TCP11L2Q8N4U5 519 aa6.89□□□□□ -1.31
SNHG1-214ENST00000540865 KRI1Q8N9T8 703 aaKnown RBP6.89□□□□□ -1.31
SNHG1-214ENST00000540865 CDCA7LQ96GN5 454 aa6.89□□□□□ -1.31
SNHG1-214ENST00000540865 SLC24A3Q9HC58 644 aa6.89□□□□□ -1.31
SNHG1-214ENST00000540865 THRAP3Q9Y2W1 955 aaKnown RBP6.89□□□□□ -1.31
SNHG1-214ENST00000540865 KIAA0232Q92628 1395 aa6.89□□□□□ -1.31
SNHG1-214ENST00000540865 SPATA31E1Q6ZUB1 1445 aa6.89□□□□□ -1.31
SNHG1-214ENST00000540865 ABCA3Q99758 1704 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 EIF3AQ14152 1382 aaKnown RBP6.88□□□□□ -1.31
SNHG1-214ENST00000540865 C3orf80F5H4A9 247 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 LCE2BO14633 110 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 PRSS12P56730 875 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 CHRNA2Q15822 529 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 NGDNQ8NEJ9 315 aaKnown RBP6.88□□□□□ -1.31
SNHG1-214ENST00000540865 SYT17Q9BSW7 474 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 POGKQ9P215 609 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 USP35Q9P2H5 1018 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 TSKSQ9UJT2 592 aa6.88□□□□□ -1.31
SNHG1-214ENST00000540865 PPLO60437 1756 aa6.87□□□□□ -1.31
SNHG1-214ENST00000540865 KNDC1Q76NI1 1749 aa6.87□□□□□ -1.31
SNHG1-214ENST00000540865 SSH2Q76I76 1423 aa6.87□□□□□ -1.31
SNHG1-214ENST00000540865 ZBTB7AO95365 584 aa6.87□□□□□ -1.31
SNHG1-214ENST00000540865 ZC3H6P61129 1189 aaKnown RBP6.87□□□□□ -1.31
SNHG1-214ENST00000540865 CFAP70Q5T0N1 1121 aa6.87□□□□□ -1.31
SNHG1-214ENST00000540865 FHDC1Q9C0D6 1143 aaPredicted RBP6.87□□□□□ -1.31
SNHG1-214ENST00000540865 GOLGB1Q14789 3259 aaKnown RBP6.87□□□□□ -1.31
SNHG1-214ENST00000540865 RREB1Q92766 1687 aa6.87□□□□□ -1.31
SNHG1-214ENST00000540865 PRR36Q9H6K5 1346 aa6.86□□□□□ -1.31
SNHG1-214ENST00000540865 GIGYF1O75420 1035 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-214ENST00000540865 LARP1Q6PKG0 1096 aaKnown RBP6.86□□□□□ -1.31
SNHG1-214ENST00000540865 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
SNHG1-214ENST00000540865 RABGEF1Q9UJ41 708 aa6.86□□□□□ -1.31
SNHG1-214ENST00000540865 NUP188Q5SRE5 1749 aa6.86□□□□□ -1.31
SNHG1-214ENST00000540865 SOWAHBA6NEL2 793 aa6.85□□□□□ -1.31
SNHG1-214ENST00000540865 TRIM6-TRIM34B2RNG4 842 aa6.85□□□□□ -1.31
SNHG1-214ENST00000540865 WASLO00401 505 aaPredicted RBP6.85□□□□□ -1.31
SNHG1-214ENST00000540865 MAP2K5Q13163 448 aa6.85□□□□□ -1.31
SNHG1-214ENST00000540865 TTC13Q8NBP0 860 aa6.85□□□□□ -1.31
SNHG1-214ENST00000540865 MTFR1LQ9H019 292 aa6.85□□□□□ -1.31
SNHG1-214ENST00000540865 WBP1LQ9NX94 342 aa6.85□□□□□ -1.31
SNHG1-214ENST00000540865 STK32BQ9NY57 414 aa6.85□□□□□ -1.31
SNHG1-214ENST00000540865 DLC1Q96QB1 1528 aa6.85□□□□□ -1.31
SNHG1-214ENST00000540865 OVOS2A0A0G2JMS6 1433 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 OVOS2A0A0J9YW53 1432 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 OVOS2Q6IE36 1432 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 TRPM3Q9HCF6 1732 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-214ENST00000540865 CPDO75976 1380 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 MAP3K5Q99683 1374 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 ALS2Q96Q42 1657 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 NRKQ7Z2Y5 1582 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 SMAPO00193 183 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 IRF6O14896 467 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 SLC15A2Q16348 729 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 CCDC102AQ96A19 550 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 ARXQ96QS3 562 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 HIRIP3Q9BW71 556 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-214ENST00000540865 KIAA1468Q9P260 1216 aa6.84□□□□□ -1.31
SNHG1-214ENST00000540865 CAMTA1Q9Y6Y1 1673 aa6.84□□□□□ -1.32
SNHG1-214ENST00000540865 MINK1Q8N4C8 1332 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-214ENST00000540865 TULP4Q9NRJ4 1543 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 KCNC4Q03721 635 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 DDB1Q16531 1140 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 NLRP7Q8WX94 980 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 PHOX2BQ99453 314 aa6.83□□□□□ -1.32
SNHG1-214ENST00000540865 RBM27Q9P2N5 1060 aaKnown RBP6.83□□□□□ -1.32
SNHG1-214ENST00000540865 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms