RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 PARP4Q9UKK3 1724 aaKnown RBP31.35■■■□□ 2.61
TTC3-225ENST00000540756 IL2RBP14784 551 aa31.33■■■□□ 2.61
TTC3-225ENST00000540756 EIF4A1P60842 406 aaKnown RBP31.33■■■□□ 2.61
TTC3-225ENST00000540756 ITPRIPQ8IWB1 547 aa31.33■■■□□ 2.61
TTC3-225ENST00000540756 SLC4A2P04920 1241 aa31.32■■■□□ 2.6
TTC3-225ENST00000540756 MS4A1P11836 297 aa31.32■■■□□ 2.6
TTC3-225ENST00000540756 ZCRB1Q8TBF4 217 aaKnown RBP31.31■■■□□ 2.6
TTC3-225ENST00000540756 ARHGAP45Q92619 1136 aa31.31■■■□□ 2.6
TTC3-225ENST00000540756 CERKQ8TCT0 537 aa31.31■■■□□ 2.6
TTC3-225ENST00000540756 PLEKHG2Q9H7P9 1386 aa31.29■■■□□ 2.6
TTC3-225ENST00000540756 NFATC2IPQ8NCF5 419 aa31.29■■■□□ 2.6
TTC3-225ENST00000540756 G2E3Q7L622 706 aa31.29■■■□□ 2.6
TTC3-225ENST00000540756 KDM2BQ8NHM5 1336 aa31.28■■■□□ 2.6
TTC3-225ENST00000540756 SLC52A2Q9HAB3 445 aa31.28■■■□□ 2.6
TTC3-225ENST00000540756 PLCH1Q4KWH8 1693 aa31.28■■■□□ 2.6
TTC3-225ENST00000540756 PCDHB15Q9Y5E8 787 aa31.27■■■□□ 2.6
TTC3-225ENST00000540756 SHANK3Q9BYB0 1731 aa31.27■■■□□ 2.6
TTC3-225ENST00000540756 DCAF5Q96JK2 942 aa31.27■■■□□ 2.6
TTC3-225ENST00000540756 SLC39A6Q13433 755 aa31.26■■■□□ 2.59
TTC3-225ENST00000540756 SKAP1Q86WV1 359 aa31.25■■■□□ 2.59
TTC3-225ENST00000540756 ABCC4O15439 1325 aa31.25■■■□□ 2.59
TTC3-225ENST00000540756 IGHDP01880 384 aa31.25■■■□□ 2.59
TTC3-225ENST00000540756 DDX54Q8TDD1 881 aaKnown RBP31.25■■■□□ 2.59
TTC3-225ENST00000540756 PCDH11XQ9BZA7 1347 aa31.24■■■□□ 2.59
TTC3-225ENST00000540756 PCDH11YQ9BZA8 1340 aa31.24■■■□□ 2.59
TTC3-225ENST00000540756 RGS12O14924 1447 aa31.24■■■□□ 2.59
TTC3-225ENST00000540756 DDX19BQ9UMR2 479 aa31.24■■■□□ 2.59
TTC3-225ENST00000540756 CCDC30Q5VVM6 783 aa31.23■■■□□ 2.59
TTC3-225ENST00000540756 EIF2S2P20042 333 aaKnown RBP31.22■■■□□ 2.59
TTC3-225ENST00000540756 API5Q9BZZ5 524 aaKnown RBP31.22■■■□□ 2.59
TTC3-225ENST00000540756 PRAMEF22A3QJZ6 481 aa31.22■■■□□ 2.59
TTC3-225ENST00000540756 HDGFL1Q5TGJ6 251 aa31.22■■■□□ 2.59
TTC3-225ENST00000540756 STK31Q9BXU1 1019 aa31.2■■■□□ 2.59
TTC3-225ENST00000540756 HSP90AB1P08238 724 aaKnown RBP31.2■■■□□ 2.58
TTC3-225ENST00000540756 MRC1P22897 1456 aa31.19■■■□□ 2.58
TTC3-225ENST00000540756 ZNF790Q6PG37 636 aa31.19■■■□□ 2.58
TTC3-225ENST00000540756 CENPQQ7L2Z9 268 aaPredicted RBP31.19■■■□□ 2.58
TTC3-225ENST00000540756 NRAPQ86VF7 1730 aa31.19■■■□□ 2.58
TTC3-225ENST00000540756 SOS1Q07889 1333 aaPredicted RBP31.18■■■□□ 2.58
TTC3-225ENST00000540756 ZBTB40Q9NUA8 1239 aa31.18■■■□□ 2.58
TTC3-225ENST00000540756 HEG1Q9ULI3 1381 aa31.18■■■□□ 2.58
TTC3-225ENST00000540756 GIGYF1O75420 1035 aaPredicted RBP31.17■■■□□ 2.58
TTC3-225ENST00000540756 PTPRCP08575 1304 aa31.17■■■□□ 2.58
TTC3-225ENST00000540756 CABP4P57796 275 aa31.17■■■□□ 2.58
TTC3-225ENST00000540756 AAMPQ13685 434 aa31.17■■■□□ 2.58
TTC3-225ENST00000540756 DISP2A7MBM2 1401 aa31.16■■■□□ 2.58
TTC3-225ENST00000540756 F6X3S4 739 aa31.16■■■□□ 2.58
TTC3-225ENST00000540756 ZBTB7BO15156 539 aaPredicted RBP31.16■■■□□ 2.58
TTC3-225ENST00000540756 CACNA1FO60840 1977 aa31.16■■■□□ 2.58
TTC3-225ENST00000540756 NKX1-1Q15270 411 aaPredicted RBP31.15■■■□□ 2.58
TTC3-225ENST00000540756 FLIIQ13045 1269 aa31.14■■■□□ 2.58
TTC3-225ENST00000540756 TSHZ2Q9NRE2 1034 aa31.14■■■□□ 2.58
TTC3-225ENST00000540756 JCADQ9P266 1359 aa31.14■■■□□ 2.57
TTC3-225ENST00000540756 HOXB7P09629 217 aa31.14■■■□□ 2.57
TTC3-225ENST00000540756 PHAXQ9H814 394 aaKnown RBP31.14■■■□□ 2.57
TTC3-225ENST00000540756 CHPF2Q9P2E5 772 aa31.14■■■□□ 2.57
TTC3-225ENST00000540756 ANXA1P04083 346 aa31.13■■■□□ 2.57
TTC3-225ENST00000540756 ZNF496Q96IT1 587 aaPredicted RBP31.12■■■□□ 2.57
TTC3-225ENST00000540756 SLIT2O94813 1529 aa31.11■■■□□ 2.57
TTC3-225ENST00000540756 SPATA31A1Q5TZJ5 1347 aa31.11■■■□□ 2.57
TTC3-225ENST00000540756 INTS3Q68E01 1043 aaKnown RBP31.1■■■□□ 2.57
TTC3-225ENST00000540756 C1orf115Q9H7X2 142 aa31.1■■■□□ 2.57
TTC3-225ENST00000540756 FKBP5Q13451 457 aaPredicted RBP31.1■■■□□ 2.57
TTC3-225ENST00000540756 C5P01031 1676 aa31.1■■■□□ 2.57
TTC3-225ENST00000540756 TOGARAM1Q9Y4F4 1720 aa31.09■■■□□ 2.57
TTC3-225ENST00000540756 C8orf37Q96NL8 207 aa31.09■■■□□ 2.57
TTC3-225ENST00000540756 WNK3Q9BYP7 1800 aa31.09■■■□□ 2.57
TTC3-225ENST00000540756 SLC4A10Q6U841 1118 aa31.08■■■□□ 2.57
TTC3-225ENST00000540756 NWD2Q9ULI1 1742 aa31.07■■■□□ 2.56
TTC3-225ENST00000540756 ERVV-2B6SEH9 535 aa31.07■■■□□ 2.56
TTC3-225ENST00000540756 HSPA1LP34931 641 aa31.07■■■□□ 2.56
TTC3-225ENST00000540756 PROSER3Q2NL68 480 aa31.07■■■□□ 2.56
TTC3-225ENST00000540756 TTC5Q8N0Z6 440 aa31.06■■■□□ 2.56
TTC3-225ENST00000540756 LRP6O75581 1613 aa31.04■■■□□ 2.56
TTC3-225ENST00000540756 NGLY1Q96IV0 654 aa31.04■■■□□ 2.56
TTC3-225ENST00000540756 CCDC9Q9Y3X0 531 aaKnown RBP31.04■■■□□ 2.56
TTC3-225ENST00000540756 SPATA31A5Q5VU36 1347 aa31.04■■■□□ 2.56
TTC3-225ENST00000540756 SPATA31A7Q8IWB4 1347 aa31.04■■■□□ 2.56
TTC3-225ENST00000540756 KAT6BQ8WYB5 2073 aa31.03■■■□□ 2.56
TTC3-225ENST00000540756 EXOC5O00471 708 aa31.03■■■□□ 2.56
TTC3-225ENST00000540756 RWDD1Q9H446 243 aaPredicted RBP31.02■■■□□ 2.56
TTC3-225ENST00000540756 DBF4Q9UBU7 674 aaPredicted RBP31.02■■■□□ 2.56
TTC3-225ENST00000540756 USP16Q9Y5T5 823 aa31.02■■■□□ 2.56
TTC3-225ENST00000540756 GLI3P10071 1580 aa31.01■■■□□ 2.55
TTC3-225ENST00000540756 UNC5CLQ8IV45 518 aa31■■■□□ 2.55
TTC3-225ENST00000540756 BCL9LQ86UU0 1499 aa31■■■□□ 2.55
TTC3-225ENST00000540756 PDIA6Q15084 440 aa31■■■□□ 2.55
TTC3-225ENST00000540756 FMNL2Q96PY5 1086 aa31■■■□□ 2.55
TTC3-225ENST00000540756 MEIS3Q99687 375 aa31■■■□□ 2.55
TTC3-225ENST00000540756 THRAP3Q9Y2W1 955 aaKnown RBP30.98■■■□□ 2.55
TTC3-225ENST00000540756 SNRPA1P09661 255 aaKnown RBP30.98■■■□□ 2.55
TTC3-225ENST00000540756 HDAC1Q13547 482 aaPredicted RBP30.98■■■□□ 2.55
TTC3-225ENST00000540756 ITGB4P16144 1822 aa30.97■■■□□ 2.55
TTC3-225ENST00000540756 TNS2Q63HR2 1409 aa30.97■■■□□ 2.55
TTC3-225ENST00000540756 SPATA31A6Q5VVP1 1343 aa30.97■■■□□ 2.55
TTC3-225ENST00000540756 PIP4K2AP48426 406 aaPredicted RBP30.97■■■□□ 2.55
TTC3-225ENST00000540756 SIRT2Q8IXJ6 389 aa30.97■■■□□ 2.55
TTC3-225ENST00000540756 CHMP4AQ9BY43 222 aa30.97■■■□□ 2.55
TTC3-225ENST00000540756 TMOD3Q9NYL9 352 aa30.97■■■□□ 2.55
TTC3-225ENST00000540756 UBR2Q8IWV8 1755 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms