RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 AMOTQ4VCS5 1084 aa12.2□□□□□ -0.46
PAAF1-209ENST00000540659 ATF7IPQ6VMQ6 1270 aa12.2□□□□□ -0.46
PAAF1-209ENST00000540659 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
PAAF1-209ENST00000540659 ZNF428Q96B54 188 aa12.2□□□□□ -0.46
PAAF1-209ENST00000540659 GJD4Q96KN9 370 aaPredicted RBP12.2□□□□□ -0.46
PAAF1-209ENST00000540659 THSD7AQ9UPZ6 1657 aa12.19□□□□□ -0.46
PAAF1-209ENST00000540659 EP400Q96L91 3159 aa12.19□□□□□ -0.46
PAAF1-209ENST00000540659 WNK3Q9BYP7 1800 aa12.19□□□□□ -0.46
PAAF1-209ENST00000540659 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
PAAF1-209ENST00000540659 MVPQ14764 893 aaKnown RBP12.19□□□□□ -0.46
PAAF1-209ENST00000540659 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
PAAF1-209ENST00000540659 ITPRIPQ8IWB1 547 aa12.19□□□□□ -0.46
PAAF1-209ENST00000540659 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
PAAF1-209ENST00000540659 CCDC9Q9Y3X0 531 aaKnown RBP12.19□□□□□ -0.46
PAAF1-209ENST00000540659 MEGF6O75095 1541 aa12.19□□□□□ -0.46
PAAF1-209ENST00000540659 PKD1L3Q7Z443 1732 aa12.19□□□□□ -0.46
PAAF1-209ENST00000540659 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
PAAF1-209ENST00000540659 SIPA1L3O60292 1781 aaPredicted RBP12.18□□□□□ -0.46
PAAF1-209ENST00000540659 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
PAAF1-209ENST00000540659 TAF7Q15545 349 aaPredicted RBP12.18□□□□□ -0.46
PAAF1-209ENST00000540659 TMEM57Q8N5G2 664 aa12.18□□□□□ -0.46
PAAF1-209ENST00000540659 STRN4Q9NRL3 753 aa12.18□□□□□ -0.46
PAAF1-209ENST00000540659 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
PAAF1-209ENST00000540659 TEFQ10587 303 aa12.17□□□□□ -0.46
PAAF1-209ENST00000540659 TOM1L2Q6ZVM7 507 aa12.17□□□□□ -0.46
PAAF1-209ENST00000540659 CHMP4AQ9BY43 222 aa12.17□□□□□ -0.46
PAAF1-209ENST00000540659 SPATA31A5Q5VU36 1347 aa12.16□□□□□ -0.46
PAAF1-209ENST00000540659 SPATA31A7Q8IWB4 1347 aa12.16□□□□□ -0.46
PAAF1-209ENST00000540659 NECTIN2Q92692 538 aa12.16□□□□□ -0.46
PAAF1-209ENST00000540659 SPG7Q9UQ90 795 aa12.16□□□□□ -0.46
PAAF1-209ENST00000540659 CEMIPQ8WUJ3 1361 aa12.16□□□□□ -0.46
PAAF1-209ENST00000540659 ADAMTS7Q9UKP4 1686 aa12.16□□□□□ -0.46
PAAF1-209ENST00000540659 WDR17Q8IZU2 1322 aa12.15□□□□□ -0.46
PAAF1-209ENST00000540659 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-209ENST00000540659 EVA1CP58658 441 aa12.15□□□□□ -0.46
PAAF1-209ENST00000540659 CENPQQ7L2Z9 268 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-209ENST00000540659 SKAP1Q86WV1 359 aa12.15□□□□□ -0.46
PAAF1-209ENST00000540659 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
PAAF1-209ENST00000540659 KDM2BQ8NHM5 1336 aa12.14□□□□□ -0.47
PAAF1-209ENST00000540659 BTBD11A6QL63 1104 aa12.14□□□□□ -0.47
PAAF1-209ENST00000540659 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
PAAF1-209ENST00000540659 LARP1Q6PKG0 1096 aaKnown RBP12.14□□□□□ -0.47
PAAF1-209ENST00000540659 DDX19BQ9UMR2 479 aa12.14□□□□□ -0.47
PAAF1-209ENST00000540659 SHANK3Q9BYB0 1731 aa12.14□□□□□ -0.47
PAAF1-209ENST00000540659 KCNQ3O43525 872 aa12.13□□□□□ -0.47
PAAF1-209ENST00000540659 IGHDP01880 384 aa12.13□□□□□ -0.47
PAAF1-209ENST00000540659 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
PAAF1-209ENST00000540659 PHKG2P15735 406 aa12.13□□□□□ -0.47
PAAF1-209ENST00000540659 ARHGAP45Q92619 1136 aa12.13□□□□□ -0.47
PAAF1-209ENST00000540659 API5Q9BZZ5 524 aaKnown RBP12.13□□□□□ -0.47
PAAF1-209ENST00000540659 BABAM1Q9NWV8 329 aa12.13□□□□□ -0.47
PAAF1-209ENST00000540659 OVOS2A0A0G2JMS6 1433 aa12.12□□□□□ -0.47
PAAF1-209ENST00000540659 A0A0G2JS52 829 aa12.12□□□□□ -0.47
PAAF1-209ENST00000540659 MYT1Q01538 1121 aa12.12□□□□□ -0.47
PAAF1-209ENST00000540659 SEPT12Q8IYM1 358 aa12.12□□□□□ -0.47
PAAF1-209ENST00000540659 IFNL2Q8IZJ0 200 aa12.12□□□□□ -0.47
PAAF1-209ENST00000540659 STK31Q9BXU1 1019 aa12.12□□□□□ -0.47
PAAF1-209ENST00000540659 PCDHB15Q9Y5E8 787 aa12.12□□□□□ -0.47
PAAF1-209ENST00000540659 ABCC4O15439 1325 aa12.11□□□□□ -0.47
PAAF1-209ENST00000540659 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
PAAF1-209ENST00000540659 C5P01031 1676 aa12.11□□□□□ -0.47
PAAF1-209ENST00000540659 AAMPQ13685 434 aa12.11□□□□□ -0.47
PAAF1-209ENST00000540659 G2E3Q7L622 706 aa12.11□□□□□ -0.47
PAAF1-209ENST00000540659 USP35Q9P2H5 1018 aa12.11□□□□□ -0.47
PAAF1-209ENST00000540659 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
PAAF1-209ENST00000540659 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
PAAF1-209ENST00000540659 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
PAAF1-209ENST00000540659 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
PAAF1-209ENST00000540659 CCDC30Q5VVM6 783 aa12.1□□□□□ -0.47
PAAF1-209ENST00000540659 CYP27B1O15528 508 aa12.09□□□□□ -0.47
PAAF1-209ENST00000540659 IL2RBP14784 551 aa12.09□□□□□ -0.47
PAAF1-209ENST00000540659 CARD10Q9BWT7 1032 aa12.09□□□□□ -0.47
PAAF1-209ENST00000540659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.09□□□□□ -0.47
PAAF1-209ENST00000540659 PTPRCP08575 1304 aa12.09□□□□□ -0.47
PAAF1-209ENST00000540659 CACNA1FO60840 1977 aa12.09□□□□□ -0.47
PAAF1-209ENST00000540659 HSP90AB1P08238 724 aaKnown RBP12.08□□□□□ -0.48
PAAF1-209ENST00000540659 SLC39A6Q13433 755 aa12.08□□□□□ -0.48
PAAF1-209ENST00000540659 BARGINQ6ZT62 677 aa12.08□□□□□ -0.48
PAAF1-209ENST00000540659 ZCRB1Q8TBF4 217 aaKnown RBP12.08□□□□□ -0.48
PAAF1-209ENST00000540659 UPF1Q92900 1129 aaKnown RBP eCLIP12.08□□□□□ -0.48
PAAF1-209ENST00000540659 RWDD1Q9H446 243 aaPredicted RBP12.08□□□□□ -0.48
PAAF1-209ENST00000540659 C1orf115Q9H7X2 142 aa12.08□□□□□ -0.48
PAAF1-209ENST00000540659 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
PAAF1-209ENST00000540659 DISP2A7MBM2 1401 aa12.08□□□□□ -0.48
PAAF1-209ENST00000540659 PCDH11XQ9BZA7 1347 aa12.08□□□□□ -0.48
PAAF1-209ENST00000540659 PCDH11YQ9BZA8 1340 aa12.08□□□□□ -0.48
PAAF1-209ENST00000540659 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
PAAF1-209ENST00000540659 RGS3P49796 1198 aa12.07□□□□□ -0.48
PAAF1-209ENST00000540659 SLC4A10Q6U841 1118 aa12.07□□□□□ -0.48
PAAF1-209ENST00000540659 KRT27Q7Z3Y8 459 aa12.07□□□□□ -0.48
PAAF1-209ENST00000540659 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
PAAF1-209ENST00000540659 ZBTB40Q9NUA8 1239 aa12.07□□□□□ -0.48
PAAF1-209ENST00000540659 THRAP3Q9Y2W1 955 aaKnown RBP12.07□□□□□ -0.48
PAAF1-209ENST00000540659 N4BP2Q86UW6 1770 aaPredicted RBP12.07□□□□□ -0.48
PAAF1-209ENST00000540659 MRC1P22897 1456 aa12.07□□□□□ -0.48
PAAF1-209ENST00000540659 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
PAAF1-209ENST00000540659 TOGARAM1Q9Y4F4 1720 aa12.06□□□□□ -0.48
PAAF1-209ENST00000540659 F6X3S4 739 aa12.06□□□□□ -0.48
PAAF1-209ENST00000540659 CABP4P57796 275 aa12.06□□□□□ -0.48
PAAF1-209ENST00000540659 FKBP5Q13451 457 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms