RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 PTPRCP08575 1304 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 SYCE3A1L190 88 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 CPA1P15085 419 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 CWF19L2Q2TBE0 894 aaKnown RBP11.98□□□□□ -0.49
PHC1-208ENST00000540574 DDX17Q92841 729 aaKnown RBP11.98□□□□□ -0.49
PHC1-208ENST00000540574 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
PHC1-208ENST00000540574 FSD1Q9BTV5 496 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 SMC3Q9UQE7 1217 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 LAMC1P11047 1609 aa11.98□□□□□ -0.49
PHC1-208ENST00000540574 CNTROBQ8N137 903 aa11.97□□□□□ -0.49
PHC1-208ENST00000540574 BOLA2Q9H3K6 86 aa11.97□□□□□ -0.49
PHC1-208ENST00000540574 HOXC9P31274 260 aa11.97□□□□□ -0.49
PHC1-208ENST00000540574 FERMT3Q86UX7 667 aa11.97□□□□□ -0.49
PHC1-208ENST00000540574 ORAI2Q96SN7 254 aa11.97□□□□□ -0.49
PHC1-208ENST00000540574 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
PHC1-208ENST00000540574 STRN4Q9NRL3 753 aa11.97□□□□□ -0.49
PHC1-208ENST00000540574 PTCD1O75127 700 aaKnown RBP11.96□□□□□ -0.49
PHC1-208ENST00000540574 DNAAF4Q8WXU2 420 aa11.96□□□□□ -0.49
PHC1-208ENST00000540574 ANTXR1Q9H6X2 564 aa11.96□□□□□ -0.49
PHC1-208ENST00000540574 PPP6R1Q9UPN7 881 aa11.96□□□□□ -0.49
PHC1-208ENST00000540574 TAF7LQ5H9L4 462 aa11.96□□□□□ -0.49
PHC1-208ENST00000540574 MAP3K2Q9Y2U5 619 aa11.96□□□□□ -0.49
PHC1-208ENST00000540574 DDX58O95786 925 aaKnown RBP11.96□□□□□ -0.5
PHC1-208ENST00000540574 ZKSCAN1P17029 563 aaPredicted RBP11.96□□□□□ -0.5
PHC1-208ENST00000540574 ATF3P18847 181 aa11.96□□□□□ -0.5
PHC1-208ENST00000540574 DRC7Q8IY82 874 aa11.96□□□□□ -0.5
PHC1-208ENST00000540574 USP26Q9BXU7 913 aa11.96□□□□□ -0.5
PHC1-208ENST00000540574 ABCC4O15439 1325 aa11.96□□□□□ -0.5
PHC1-208ENST00000540574 ATP5J2-PTCD1G3V325 749 aa11.95□□□□□ -0.5
PHC1-208ENST00000540574 NBPF7P0C2Y1 421 aaPredicted RBP11.95□□□□□ -0.5
PHC1-208ENST00000540574 PTMSP20962 102 aa11.95□□□□□ -0.5
PHC1-208ENST00000540574 RBM25P49756 843 aaKnown RBP11.95□□□□□ -0.5
PHC1-208ENST00000540574 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
PHC1-208ENST00000540574 ARAP3Q8WWN8 1544 aa11.95□□□□□ -0.5
PHC1-208ENST00000540574 FAM177BA6PVY3 158 aa11.95□□□□□ -0.5
PHC1-208ENST00000540574 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
PHC1-208ENST00000540574 CEBPZQ03701 1054 aaKnown RBP11.95□□□□□ -0.5
PHC1-208ENST00000540574 PRPF40BQ6NWY9 871 aaKnown RBP11.95□□□□□ -0.5
PHC1-208ENST00000540574 JAKMIP1Q96N16 626 aaKnown RBP11.95□□□□□ -0.5
PHC1-208ENST00000540574 FLT4P35916 1363 aa11.94□□□□□ -0.5
PHC1-208ENST00000540574 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
PHC1-208ENST00000540574 KLHDC4Q8TBB5 520 aa11.94□□□□□ -0.5
PHC1-208ENST00000540574 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
PHC1-208ENST00000540574 TMX3Q96JJ7 454 aa11.94□□□□□ -0.5
PHC1-208ENST00000540574 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
PHC1-208ENST00000540574 TMEM2Q9UHN6 1383 aa11.94□□□□□ -0.5
PHC1-208ENST00000540574 CCDC83Q8IWF9 413 aa11.94□□□□□ -0.5
PHC1-208ENST00000540574 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
PHC1-208ENST00000540574 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
PHC1-208ENST00000540574 RHPN1Q8TCX5 695 aa11.93□□□□□ -0.5
PHC1-208ENST00000540574 RUFY2Q8WXA3 655 aa11.93□□□□□ -0.5
PHC1-208ENST00000540574 RRAGDQ9NQL2 400 aaPredicted RBP11.93□□□□□ -0.5
PHC1-208ENST00000540574 ADGRB1O14514 1584 aa11.93□□□□□ -0.5
PHC1-208ENST00000540574 ANKRD24Q8TF21 1146 aa11.93□□□□□ -0.5
PHC1-208ENST00000540574 SYAP1Q96A49 352 aaPredicted RBP11.93□□□□□ -0.5
PHC1-208ENST00000540574 MYD88Q99836 296 aa11.93□□□□□ -0.5
PHC1-208ENST00000540574 ESPNB1AK53 854 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 EVA1CP58658 441 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 KIF1BPQ96EK5 621 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 RAB3GAP1Q15042 981 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 ESYT1Q9BSJ8 1104 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 NDUFB9Q9Y6M9 179 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 RTL1A6NKG5 1358 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 FAM135BQ49AJ0 1406 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 ATP8B2P98198 1209 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 SNX21Q969T3 373 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 CAMSAP1Q5T5Y3 1602 aa11.92□□□□□ -0.5
PHC1-208ENST00000540574 PRAMEF22A3QJZ6 481 aa11.91□□□□□ -0.5
PHC1-208ENST00000540574 HSP90AB4PQ58FF6 505 aa11.91□□□□□ -0.5
PHC1-208ENST00000540574 PALD1Q9ULE6 856 aa11.91□□□□□ -0.5
PHC1-208ENST00000540574 ALKQ9UM73 1620 aa11.91□□□□□ -0.5
PHC1-208ENST00000540574 LRRC7Q96NW7 1537 aa11.91□□□□□ -0.5
PHC1-208ENST00000540574 CHMP4AQ9BY43 222 aa11.91□□□□□ -0.5
PHC1-208ENST00000540574 A2ML1A8K2U0 1454 aa11.91□□□□□ -0.5
PHC1-208ENST00000540574 PTPRMP28827 1452 aa11.91□□□□□ -0.5
PHC1-208ENST00000540574 PLEKHG3A1L390 1219 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 H3BQV1 296 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 TATP17735 454 aaPredicted RBP11.9□□□□□ -0.5
PHC1-208ENST00000540574 IFFO2Q5TF58 517 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 GAS2L3Q86XJ1 694 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 NECAB1Q8N987 351 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 MYOM1P52179 1685 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 NEXMIFQ5QGS0 1516 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 ZRSR1Q15695 479 aaKnown RBP11.9□□□□□ -0.5
PHC1-208ENST00000540574 KRT28Q7Z3Y7 464 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 MROH1Q8NDA8 1641 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 TTC21AQ8NDW8 1320 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 GCP02774 474 aa11.9□□□□□ -0.5
PHC1-208ENST00000540574 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.5
PHC1-208ENST00000540574 R3HCC1Q9Y3T6 440 aaKnown RBP11.9□□□□□ -0.5
PHC1-208ENST00000540574 FAM184AQ8NB25 1140 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 NFATC2IPQ8NCF5 419 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 USP44Q9H0E7 712 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 HDAC5Q9UQL6 1122 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 TOM1L2Q6ZVM7 507 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 DDX11Q96FC9 970 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 CWC22Q9HCG8 908 aaKnown RBP11.89□□□□□ -0.51
PHC1-208ENST00000540574 TOMM22Q9NS69 142 aa11.89□□□□□ -0.51
PHC1-208ENST00000540574 PIK3R4Q99570 1358 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms